RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 BACE1P56817 501 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 PTH1RQ03431 593 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 EVX2Q03828 476 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 ICA1Q05084 483 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 PABPC4Q13310 644 aaKnown RBP eCLIP11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 KRT32Q14532 448 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 RRP1BQ14684 758 aaKnown RBP11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 RAB3GAP1Q15042 981 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 TSGA10IPQ3SY00 556 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 TBC1D10CQ8IV04 446 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 LPAR1Q92633 364 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 TCP11L1Q9NUJ3 509 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 NYAP2Q9P242 653 aa11.21□□□□□ -0.61
SQSTM1P1-201ENST00000603451 CCL15-CCL14A0A0B4J2E2 113 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TTLL1O95922 423 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 GUCY1A2P33402 732 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 NOVP48745 357 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 SEPT2Q15019 361 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 CCL15Q16663 113 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 RALYLQ86SE5 291 aaKnown RBP11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 ANKRD23Q86SG2 305 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 IQCA1Q86XH1 822 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 AGTPBP1Q9UPW5 1226 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TMX2Q9Y320 296 aa11.2□□□□□ -0.62
SQSTM1P1-201ENST00000603451 PARP14Q460N5 1801 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 NEDD4P46934 1319 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 WDR19Q8NEZ3 1342 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 A0A0G2JMZ2 1700 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TRIM75PA6NK02 468 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 PRDM1O75626 825 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 SLURP2P0DP57 97 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MCCP23508 829 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 HAND2P61296 217 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 JAG1P78504 1218 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TFAP4Q01664 338 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 SPP2Q13103 211 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 NCOA7Q8NI08 942 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 GTF3C2Q8WUA4 911 aaPredicted RBP11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 KCNB2Q92953 911 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MKL1Q969V6 931 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TTC14Q96N46 770 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 FEZ1Q99689 392 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 GOPCQ9HD26 462 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MTMR4Q9NYA4 1195 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TMOD4Q9NZQ9 345 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 CEP350Q5VT06 3117 aa11.19□□□□□ -0.62
SQSTM1P1-201ENST00000603451 E7EWF7 191 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 SMIM22K7EJ46 135 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 SLC27A2O14975 620 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 RANBP6O60518 1105 aaKnown RBP11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 AOC2O75106 756 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 HMGB1P09429 215 aaKnown RBP11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 HSPA4P34932 840 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 GRM1Q13255 1194 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MTMR2Q13614 643 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MOGSQ13724 837 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 CREB3L3Q68CJ9 461 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 DGKHQ86XP1 1220 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 GMCL1P1Q8NEA9 526 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 BRI3BPQ8WY22 251 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TOMM22Q9NS69 142 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MYPNQ86TC9 1320 aa11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 WDR46O15213 610 aaKnown RBP11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 KDM4AO75164 1064 aa11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 HOXA7P31268 230 aaPredicted RBP11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 HMGCS2P54868 508 aa11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 ANAPC15P60006 121 aa11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 IL27Q8NEV9 243 aa11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 CEP95Q96GE4 821 aa11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 PARK7Q99497 189 aaKnown RBP11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 UBAC1Q9BSL1 405 aa11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 VCPKMTQ9H867 229 aa11.17□□□□□ -0.62
SQSTM1P1-201ENST00000603451 ERICH2A1L162 156 aa11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 BTBD19C9JJ37 291 aa11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 IGF2BP3O00425 579 aaKnown RBP eCLIP11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TOP1P11387 765 aaKnown RBP11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 EEF2P13639 858 aaKnown RBP11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 SHROOM1Q2M3G4 852 aaPredicted RBP11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 FAM47AQ5JRC9 791 aa11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 RRP12Q5JTH9 1297 aaKnown RBP11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 RCSD1Q6JBY9 416 aa11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 ANKS1AQ92625 1134 aa11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 IL17RAQ96F46 866 aa11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
SQSTM1P1-201ENST00000603451 A0A1W2PRG0 241 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 B4E1Z4 1266 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms