RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 ZSCAN16Q9H4T2 348 aaPredicted RBP26.02■■□□□ 1.76
PPFIA3-212ENST00000602897 LMBRD1Q9NUN5 540 aa26.02■■□□□ 1.76
PPFIA3-212ENST00000602897 FOCADQ5VW36 1801 aa26.02■■□□□ 1.76
PPFIA3-212ENST00000602897 MYO1BO43795 1136 aa26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 CALM1P0DP23 149 aa26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 CALM2P0DP24 149 aa26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 CALM3P0DP25 149 aa26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 CRKP46108 304 aa26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 APOBEC3FQ8IUX4 373 aaKnown RBP26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 PRMT6Q96LA8 375 aaPredicted RBP26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 SENP2Q9HC62 589 aa26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 SERPINA10Q9UK55 444 aa26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 TAOK2Q9UL54 1235 aa26.01■■□□□ 1.75
PPFIA3-212ENST00000602897 GRM1Q13255 1194 aa26■■□□□ 1.75
PPFIA3-212ENST00000602897 CSPP1Q1MSJ5 1256 aa26■■□□□ 1.75
PPFIA3-212ENST00000602897 ENAHQ8N8S7 591 aaPredicted RBP26■■□□□ 1.75
PPFIA3-212ENST00000602897 CAPNS2Q96L46 248 aa26■■□□□ 1.75
PPFIA3-212ENST00000602897 ZKSCAN3Q9BRR0 538 aa26■■□□□ 1.75
PPFIA3-212ENST00000602897 TCP11L1Q9NUJ3 509 aa26■■□□□ 1.75
PPFIA3-212ENST00000602897 USP40Q9NVE5 1235 aa26■■□□□ 1.75
PPFIA3-212ENST00000602897 DDX60LQ5H9U9 1706 aaKnown RBP26■■□□□ 1.75
PPFIA3-212ENST00000602897 SMIM22K7EJ46 135 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 PRDM1O75626 825 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 FDPSP14324 419 aaKnown RBP25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 HUNKP57058 714 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 PRAMEF18Q5VWM3 479 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 CYP4F22Q6NT55 531 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 TTC6Q86TZ1 520 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 TMEM87AQ8NBN3 555 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 MKNK2Q9HBH9 465 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 ECE1P42892 770 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 IFIT1BQ5T764 474 aaKnown RBP25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 APOBEC3HQ6NTF7 200 aaKnown RBP25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 C16orf86Q6ZW13 317 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 MICU3Q86XE3 530 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 ZNF654Q8IZM8 581 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 ANKS1AQ92625 1134 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 HHIPL1Q96JK4 782 aa25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 ORC3Q9UBD5 711 aaPredicted RBP25.99■■□□□ 1.75
PPFIA3-212ENST00000602897 STK36Q9NRP7 1315 aa25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 CLRN2A0PK11 232 aa25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 TSPY2A6NKD2 308 aa25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 PRPF40AO75400 957 aaKnown RBP25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 NPM3O75607 178 aaKnown RBP25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 KLHL40Q2TBA0 621 aa25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 CATIPQ7Z7H3 387 aa25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 DGKHQ86XP1 1220 aa25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 ZNF444Q8N0Y2 327 aaPredicted RBP25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 FAM217BQ9NTX9 383 aaPredicted RBP25.98■■□□□ 1.75
PPFIA3-212ENST00000602897 DDAH1O94760 285 aa25.97■■□□□ 1.75
PPFIA3-212ENST00000602897 IFNAR1P17181 557 aa25.97■■□□□ 1.75
PPFIA3-212ENST00000602897 ADD1P35611 737 aaKnown RBP25.97■■□□□ 1.75
PPFIA3-212ENST00000602897 RTN1Q16799 776 aa25.97■■□□□ 1.75
PPFIA3-212ENST00000602897 CDC42EP5Q6NZY7 148 aa25.97■■□□□ 1.75
PPFIA3-212ENST00000602897 FANCBQ8NB91 859 aa25.97■■□□□ 1.75
PPFIA3-212ENST00000602897 WDHD1O75717 1129 aaPredicted RBP25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 PLCD1P51178 756 aa25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 NTRK3Q16288 839 aa25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 WASF1Q92558 559 aa25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 VEZTQ9HBM0 779 aa25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 SAP30BPQ9UHR5 308 aaKnown RBP25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 MYH1P12882 1939 aa25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 DTNBO60941 627 aa25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 CDC27P30260 824 aa25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 TFAP4Q01664 338 aa25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 RBM28Q9NW13 759 aaKnown RBP25.96■■□□□ 1.75
PPFIA3-212ENST00000602897 DYNLL2Q96FJ2 89 aa25.95■■□□□ 1.74
PPFIA3-212ENST00000602897 DEFB129Q9H1M3 183 aa25.95■■□□□ 1.74
PPFIA3-212ENST00000602897 MBD3O95983 291 aa25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 HSPA1AP0DMV8 641 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 HSPA1BP0DMV9 641 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 NF2P35240 595 aa25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 CDK8P49336 464 aa25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 EVX2Q03828 476 aa25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 GSE1Q14687 1217 aa25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 C8orf76Q96K31 380 aa25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 IDI2Q9BXS1 227 aa25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 TDRD3Q9H7E2 651 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 DDX49Q9Y6V7 483 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-212ENST00000602897 NCLP19338 710 aaKnown RBP25.93■■□□□ 1.74
PPFIA3-212ENST00000602897 KRT85P78386 507 aa25.93■■□□□ 1.74
PPFIA3-212ENST00000602897 SSRP1Q08945 709 aaKnown RBP25.93■■□□□ 1.74
PPFIA3-212ENST00000602897 RESTQ13127 1097 aa25.93■■□□□ 1.74
PPFIA3-212ENST00000602897 FAM47AQ5JRC9 791 aa25.93■■□□□ 1.74
PPFIA3-212ENST00000602897 ATL3Q6DD88 541 aa25.93■■□□□ 1.74
PPFIA3-212ENST00000602897 RAB11FIP4Q86YS3 637 aa25.93■■□□□ 1.74
PPFIA3-212ENST00000602897 MAP3K14Q99558 947 aa25.93■■□□□ 1.74
PPFIA3-212ENST00000602897 FMNL1O95466 1100 aaPredicted RBP25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 TSPY3P0CV98 308 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 TSPY8P0CW00 308 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 RASA1P20936 1047 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 FKBP1BP68106 108 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 TRIM22Q8IYM9 498 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 FBXO18Q8NFZ0 1043 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 OSBPL5Q9H0X9 879 aaPredicted RBP25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 ZNF70Q9UC06 446 aaPredicted RBP25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 SWAP70Q9UH65 585 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 RXRAP19793 462 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 SPDYE2Q495Y8 402 aa25.92■■□□□ 1.74
PPFIA3-212ENST00000602897 NEDD1Q8NHV4 660 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms