RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SWAP70Q9UH65 585 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 NID2Q14112 1375 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 H7C1D1 291 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 RASA3Q14644 834 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 FOXD4L5Q5VV16 416 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 METTL16Q86W50 562 aaKnown RBP20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 SMARCC2Q8TAQ2 1214 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 NUP133Q8WUM0 1156 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 FOXD4L4Q8WXT5 416 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 CHMP4CQ96CF2 233 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 ZNF287Q9HBT7 754 aa20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-207ENST00000602716 IGKV6D-41A0A0C4DH26 115 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 GDF11O95390 407 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 FAM83AQ86UY5 434 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 TEPSINQ96N21 525 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 TCP11L1Q9NUJ3 509 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 GREB1LQ9C091 1923 aaPredicted RBP20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 UBE2Q2LH0YL09 131 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 MMP14P50281 582 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 TROAPQ12815 778 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 ANGEL2Q5VTE6 544 aaKnown RBP20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 TATDN1Q6P1N9 297 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 CMTR1Q8N1G2 835 aaKnown RBP20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 GGA3Q9NZ52 723 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 STX8Q9UNK0 236 aa20.24■□□□□ 0.83
PPFIA3-207ENST00000602716 FDPSP14324 419 aaKnown RBP20.23■□□□□ 0.83
PPFIA3-207ENST00000602716 FOSBP53539 338 aa20.23■□□□□ 0.83
PPFIA3-207ENST00000602716 CHAMP1Q96JM3 812 aa20.23■□□□□ 0.83
PPFIA3-207ENST00000602716 MYH8P13535 1937 aa20.23■□□□□ 0.83
PPFIA3-207ENST00000602716 SYT1P21579 422 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 NTRK3Q16288 839 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 MIGA2Q7L4E1 593 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 PHKBQ93100 1093 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 TMEM47Q9BQJ4 181 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 DDX49Q9Y6V7 483 aaKnown RBP20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 MPHOSPH10O00566 681 aaKnown RBP20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 GRIN3BO60391 1043 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 RTN1Q16799 776 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 DGKHQ86XP1 1220 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 FOXP4Q8IVH2 680 aaPredicted RBP20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 ANKS1AQ92625 1134 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 LLPHQ9BRT6 129 aaKnown RBP20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
PPFIA3-207ENST00000602716 GUCY1A2P33402 732 aa20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 NOVP48745 357 aa20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 PRAMEF18Q5VWM3 479 aa20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 MCTP1Q6DN14 999 aa20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 CATIPQ7Z7H3 387 aa20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 PNMA1Q8ND90 353 aa20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 TRIM34Q9BYJ4 488 aa20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 MTMR4Q9NYA4 1195 aa20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.21■□□□□ 0.83
PPFIA3-207ENST00000602716 PLEKHA8P1O95397 391 aa20.2■□□□□ 0.83
PPFIA3-207ENST00000602716 BRD1O95696 1058 aa20.2■□□□□ 0.83
PPFIA3-207ENST00000602716 NT5C2P49902 561 aa20.2■□□□□ 0.83
PPFIA3-207ENST00000602716 CERKLQ49MI3 558 aaPredicted RBP20.2■□□□□ 0.83
PPFIA3-207ENST00000602716 DLK2Q6UY11 383 aa20.2■□□□□ 0.83
PPFIA3-207ENST00000602716 SYNE3Q6ZMZ3 975 aa20.2■□□□□ 0.83
PPFIA3-207ENST00000602716 FANCBQ8NB91 859 aa20.2■□□□□ 0.83
PPFIA3-207ENST00000602716 KAT14Q9H8E8 782 aa20.2■□□□□ 0.83
PPFIA3-207ENST00000602716 CPLX1O14810 134 aa20.2■□□□□ 0.82
PPFIA3-207ENST00000602716 DDAH1O94760 285 aa20.2■□□□□ 0.82
PPFIA3-207ENST00000602716 LRRC47Q8N1G4 583 aaKnown RBP20.2■□□□□ 0.82
PPFIA3-207ENST00000602716 AIFM3Q96NN9 605 aa20.2■□□□□ 0.82
PPFIA3-207ENST00000602716 DEFB129Q9H1M3 183 aa20.2■□□□□ 0.82
PPFIA3-207ENST00000602716 LMBRD1Q9NUN5 540 aa20.2■□□□□ 0.82
PPFIA3-207ENST00000602716 CLCN1P35523 988 aa20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 CCDC82Q8N4S0 544 aa20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 LMOD1P29536 600 aaPredicted RBP20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 TNNI2P48788 182 aa20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 RCAN1P53805 252 aa20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 SEPT2Q15019 361 aa20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 CDC37L1Q7L3B6 337 aa20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 L3MBTL3Q96JM7 780 aaPredicted RBP20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 GJB4Q9NTQ9 266 aa20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 HERC5Q9UII4 1024 aaKnown RBP20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 MTMR6Q9Y217 621 aa20.19■□□□□ 0.82
PPFIA3-207ENST00000602716 STX6O43752 255 aa20.18■□□□□ 0.82
PPFIA3-207ENST00000602716 GH2P01242 217 aa20.18■□□□□ 0.82
PPFIA3-207ENST00000602716 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
PPFIA3-207ENST00000602716 NBPF12Q5TAG4 269 aaPredicted RBP20.18■□□□□ 0.82
PPFIA3-207ENST00000602716 ADARB2Q9NS39 739 aaKnown RBP20.18■□□□□ 0.82
PPFIA3-207ENST00000602716 FZD1Q9UP38 647 aa20.18■□□□□ 0.82
PPFIA3-207ENST00000602716 SSC5DA1L4H1 1573 aa20.18■□□□□ 0.82
PPFIA3-207ENST00000602716 SLC35G1Q2M3R5 365 aa20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 NBPF11Q86T75 865 aa20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 CCDC17Q96LX7 622 aa20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 VPS37CA5D8V6 355 aaPredicted RBP20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 HMGN5P82970 282 aaKnown RBP20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 FUT2Q10981 343 aa20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 ABCB5Q2M3G0 1257 aa20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 LARP1BQ659C4 914 aaKnown RBP20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 SIAH1Q8IUQ4 282 aa20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 STAG2Q8N3U4 1231 aa20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 TAOK2Q9UL54 1235 aa20.17■□□□□ 0.82
PPFIA3-207ENST00000602716 hCG_1642624A0A1W2PR95 340 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms