RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PHEXP78562 749 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 CCDC197Q8NCU1 140 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 SAAL1Q96ER3 474 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 NCOA5Q9HCD5 579 aaKnown RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 GUCY2CP25092 1073 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 STX2P32856 288 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 PIP4K2CQ8TBX8 421 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 INTS4Q96HW7 963 aaKnown RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 FAM167BQ9BTA0 163 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 TRPA1O75762 1119 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 RNF8O76064 485 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 SH3BGRP55822 239 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 NCBP1Q09161 790 aaKnown RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 HAUS1Q96CS2 278 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 CTNNA1P35221 906 aaKnown RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 EIF4A2Q14240 407 aaKnown RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 KIFC2Q96AC6 838 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 SAP30BPQ9UHR5 308 aaKnown RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 KIF21AQ7Z4S6 1674 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 ANLNQ9NQW6 1124 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 NOC4LQ9BVI4 516 aaKnown RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 CXorf56Q9H5V9 222 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 AGTPBP1Q9UPW5 1226 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 KRT9P35527 623 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 SH3GL3Q99963 347 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 LDHBP07195 334 aaKnown RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 PFDN4Q9NQP4 134 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 KLHL14Q9P2G3 628 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 ARHGAP6O43182 974 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 MTMR3Q13615 1198 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 TSPYL6Q8N831 410 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 SIRT1Q96EB6 747 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 ENO4A6NNW6 628 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 SATB1Q01826 763 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 TRAF1Q13077 416 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 GEN1Q17RS7 908 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 ZCRB1Q8TBF4 217 aaKnown RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 HDAC9Q9UKV0 1011 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 FAM169AQ9Y6X4 670 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 LETM2Q2VYF4 491 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 FAM173BQ6P4H8 233 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 NFATC2IPQ8NCF5 419 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 IMPACTQ9P2X3 320 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 KCNH3Q9ULD8 1083 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 POLR2DO15514 142 aaKnown RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 KRT24Q2M2I5 525 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 NLRP3Q96P20 1036 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 CENPKQ9BS16 269 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 TAB2Q9NYJ8 693 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 MBD4O95243 580 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 RPL13P26373 211 aaKnown RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 TRPC3Q13507 836 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 BEND3Q5T5X7 828 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 UBL4BQ8N7F7 174 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 OTUD7AQ8TE49 926 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 SV2BQ7L1I2 683 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 ZC3H18Q86VM9 953 aaKnown RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 UHMK1Q8TAS1 419 aaKnown RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 PPP2R2CQ9Y2T4 447 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 UGGT2Q9NYU1 1516 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 TRMT44Q8IYL2 757 aaKnown RBP9.61□□□□□ -0.87
CSMD1-216ENST00000602557 SPDL1Q96EA4 605 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 PPP1R13BQ96KQ4 1090 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 WWC3Q9ULE0 1092 aa9.61□□□□□ -0.87
CSMD1-216ENST00000602557 RILPQ96NA2 401 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 TRIM66O15016 1216 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 IFNAR2P48551 515 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 GPCPD1Q9NPB8 672 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 ANO1Q5XXA6 986 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 Q9H521 79 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 DCTPP1Q9H773 170 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 ST7Q9NRC1 585 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 ZFYVE9O95405 1425 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 CNNM4Q6P4Q7 775 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 KIFAP3Q92845 792 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 IWS1Q96ST2 819 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 LINS1Q8NG48 757 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 DENND4BO75064 1496 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-216ENST00000602557 KRT10P13645 584 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 NLRP12P59046 1061 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 LONRF2Q1L5Z9 754 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 RIMS2Q9UQ26 1411 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 WDR7Q9Y4E6 1490 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 IRS4O14654 1257 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-216ENST00000602557 ACTN4O43707 911 aaKnown RBP9.6□□□□□ -0.87
CSMD1-216ENST00000602557 GAS8O95995 478 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 KIF22Q14807 665 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 TSPOAP1O95153 1857 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 B4E1Z4 1266 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 EXOC4Q96A65 974 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 ASIC3Q9UHC3 531 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 PPP1R21Q6ZMI0 780 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 CCDC13Q8IYE1 715 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 TBC1D7Q9P0N9 293 aa9.6□□□□□ -0.87
CSMD1-216ENST00000602557 TACC3Q9Y6A5 838 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms