RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 SPTLC2O15270 562 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 N4BP1O75113 896 aaKnown RBP25.22■■□□□ 1.63
CAPN12-212ENST00000601953 CDC27P30260 824 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 TBX2Q13207 712 aaPredicted RBP25.22■■□□□ 1.63
CAPN12-212ENST00000601953 TUBB2AQ13885 445 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 NTRK3Q16288 839 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 TMEM67Q5HYA8 995 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 TADA2BQ86TJ2 420 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 ALG1Q9BT22 464 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 TUBB2BQ9BVA1 445 aa25.22■■□□□ 1.63
CAPN12-212ENST00000601953 COL5A3P25940 1745 aaPredicted RBP25.21■■□□□ 1.63
CAPN12-212ENST00000601953 BCORQ6W2J9 1755 aa25.21■■□□□ 1.63
CAPN12-212ENST00000601953 ZNF202O95125 648 aa25.21■■□□□ 1.63
CAPN12-212ENST00000601953 AKNAD1Q5T1N1 836 aa25.21■■□□□ 1.63
CAPN12-212ENST00000601953 CDC5LQ99459 802 aaKnown RBP25.21■■□□□ 1.63
CAPN12-212ENST00000601953 KRT23Q9C075 422 aa25.21■■□□□ 1.63
CAPN12-212ENST00000601953 ZSWIM5Q9P217 1185 aa25.21■■□□□ 1.63
CAPN12-212ENST00000601953 ANO1Q5XXA6 986 aa25.2■■□□□ 1.63
CAPN12-212ENST00000601953 CCDC12Q8WUD4 166 aaPredicted RBP25.2■■□□□ 1.63
CAPN12-212ENST00000601953 NACAP1Q9BZK3 213 aa25.2■■□□□ 1.63
CAPN12-212ENST00000601953 GBP3Q9H0R5 595 aa25.2■■□□□ 1.63
CAPN12-212ENST00000601953 ZNF831Q5JPB2 1677 aa25.2■■□□□ 1.62
CAPN12-212ENST00000601953 TUBBP07437 444 aa25.2■■□□□ 1.62
CAPN12-212ENST00000601953 SART3Q15020 963 aaKnown RBP25.2■■□□□ 1.62
CAPN12-212ENST00000601953 MICU3Q86XE3 530 aa25.2■■□□□ 1.62
CAPN12-212ENST00000601953 GPATCH11Q8N954 259 aa25.2■■□□□ 1.62
CAPN12-212ENST00000601953 CNNM3Q8NE01 707 aa25.2■■□□□ 1.62
CAPN12-212ENST00000601953 ACBD3Q9H3P7 528 aa25.2■■□□□ 1.62
CAPN12-212ENST00000601953 FAM217BQ9NTX9 383 aaPredicted RBP25.2■■□□□ 1.62
CAPN12-212ENST00000601953 CTDSPL2Q05D32 466 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 DNAJC21Q5F1R6 531 aaKnown RBP25.19■■□□□ 1.62
CAPN12-212ENST00000601953 NFXL1Q6ZNB6 911 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 LCORLQ8N3X6 602 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 TACC3Q9Y6A5 838 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 NID2Q14112 1375 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 CHD4Q14839 1912 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 ZNF804BA4D1E1 1349 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 RXRAP19793 462 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 GOLGA8FQ08AF8 430 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 GOLGA8DPQ0D2H9 430 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 LTBP4Q8N2S1 1624 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 STAG1Q8WVM7 1258 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 ABCB6Q9NP58 842 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 INCENPQ9NQS7 918 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 TUBE1Q9UJT0 475 aa25.19■■□□□ 1.62
CAPN12-212ENST00000601953 GOLGA8AA7E2F4 631 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 KRT40Q6A162 431 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 MFSD6Q6ZSS7 791 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 TOGARAM2Q6ZUX3 1019 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 AIFM3Q96NN9 605 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 PNKPQ96T60 521 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 MTA3Q9BTC8 594 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 CDC23Q9UJX2 597 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 STK36Q9NRP7 1315 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 IFIT3O14879 490 aaKnown RBP25.18■■□□□ 1.62
CAPN12-212ENST00000601953 PRKAB2O43741 272 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 IARSP41252 1262 aaKnown RBP25.18■■□□□ 1.62
CAPN12-212ENST00000601953 CASP8Q14790 479 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 SLC4A4Q9Y6R1 1079 aa25.18■■□□□ 1.62
CAPN12-212ENST00000601953 TMEM232C9JQI7 657 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 KCNQ2O43526 872 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 CCDC172P0C7W6 258 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 SLC39A14Q15043 492 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 SF3B3Q15393 1217 aaKnown RBP25.17■■□□□ 1.62
CAPN12-212ENST00000601953 VPS37DQ86XT2 251 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 LRP2BPQ9P2M1 347 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 SLC12A7Q9Y666 1083 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 RGL2O15211 777 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 PHKBQ93100 1093 aa25.17■■□□□ 1.62
CAPN12-212ENST00000601953 RANBP6O60518 1105 aaKnown RBP25.16■■□□□ 1.62
CAPN12-212ENST00000601953 TDO2P48775 406 aa25.16■■□□□ 1.62
CAPN12-212ENST00000601953 CEP83Q9Y592 693 aa25.16■■□□□ 1.62
CAPN12-212ENST00000601953 COL4A1P02462 1669 aa25.16■■□□□ 1.62
CAPN12-212ENST00000601953 WDHD1O75717 1129 aaPredicted RBP25.16■■□□□ 1.62
CAPN12-212ENST00000601953 CMA1P23946 247 aa25.16■■□□□ 1.62
CAPN12-212ENST00000601953 E2F4Q16254 413 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 TC2NQ8N9U0 490 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 CCDC102AQ96A19 550 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 CXorf56Q9H5V9 222 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 ZSWIM4Q9H7M6 989 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 NUTM2BA6NNL0 878 aaPredicted RBP25.15■■□□□ 1.62
CAPN12-212ENST00000601953 NUTM2EB1AL46 878 aaPredicted RBP25.15■■□□□ 1.62
CAPN12-212ENST00000601953 UBE4AQ14139 1066 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 NUTM2AQ8IVF1 878 aaPredicted RBP25.15■■□□□ 1.62
CAPN12-212ENST00000601953 ANKRD18AQ8IVF6 992 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 FAM204AQ9H8W3 233 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 INTS13Q9NVM9 706 aa25.15■■□□□ 1.62
CAPN12-212ENST00000601953 ERFEQ4G0M1 354 aa25.14■■□□□ 1.62
CAPN12-212ENST00000601953 GNL3LQ9NVN8 582 aaKnown RBP25.14■■□□□ 1.62
CAPN12-212ENST00000601953 BSDC1Q9NW68 430 aaPredicted RBP25.14■■□□□ 1.62
CAPN12-212ENST00000601953 IFNAR1P17181 557 aa25.13■■□□□ 1.61
CAPN12-212ENST00000601953 CT47A1Q5JQC4 288 aaPredicted RBP25.13■■□□□ 1.61
CAPN12-212ENST00000601953 LINC00116Q8NCU8 138 aa25.13■■□□□ 1.61
CAPN12-212ENST00000601953 MYL10Q9BUA6 226 aa25.13■■□□□ 1.61
CAPN12-212ENST00000601953 RNF41Q9H4P4 317 aaPredicted RBP25.13■■□□□ 1.61
CAPN12-212ENST00000601953 ECM29Q5VYK3 1845 aa25.13■■□□□ 1.61
CAPN12-212ENST00000601953 PPP6R2O75170 966 aa25.13■■□□□ 1.61
CAPN12-212ENST00000601953 FMNL1O95466 1100 aaPredicted RBP25.13■■□□□ 1.61
CAPN12-212ENST00000601953 CCDC175P0C221 793 aa25.13■■□□□ 1.61
CAPN12-212ENST00000601953 PFKFB1P16118 471 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms