RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 ROBO3Q96MS0 1386 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 GREB1LQ9C091 1923 aaPredicted RBP15.26■□□□□ 0.03
USE1-209ENST00000601592 TLR2O60603 784 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 SLC3A2P08195 630 aaKnown RBP15.26■□□□□ 0.03
USE1-209ENST00000601592 GUCY1A2P33402 732 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 ATP2B2Q01814 1243 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 SP3Q02447 781 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 PPARAQ07869 468 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 PABPC4Q13310 644 aaKnown RBP eCLIP15.26■□□□□ 0.03
USE1-209ENST00000601592 USP17L2Q6R6M4 530 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 CLEC10AQ8IUN9 316 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 CD99L2Q8TCZ2 262 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 CCDC17Q96LX7 622 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 CPA4Q9UI42 421 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 PNMA3Q9UL41 463 aa15.26■□□□□ 0.03
USE1-209ENST00000601592 C19orf81C9J6K1 198 aa15.25■□□□□ 0.03
USE1-209ENST00000601592 FOXP2O15409 715 aa15.25■□□□□ 0.03
USE1-209ENST00000601592 PRDM1O75626 825 aa15.25■□□□□ 0.03
USE1-209ENST00000601592 ICA1Q05084 483 aa15.25■□□□□ 0.03
USE1-209ENST00000601592 SH3D19Q5HYK7 790 aa15.25■□□□□ 0.03
USE1-209ENST00000601592 CTU1Q7Z7A3 348 aaKnown RBP15.25■□□□□ 0.03
USE1-209ENST00000601592 ACER1Q8TDN7 264 aa15.25■□□□□ 0.03
USE1-209ENST00000601592 ERO1AQ96HE7 468 aa15.25■□□□□ 0.03
USE1-209ENST00000601592 ZNF287Q9HBT7 754 aa15.25■□□□□ 0.03
USE1-209ENST00000601592 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
USE1-209ENST00000601592 OSBPP22059 807 aa15.24■□□□□ 0.03
USE1-209ENST00000601592 IRX3P78415 501 aaPredicted RBP15.24■□□□□ 0.03
USE1-209ENST00000601592 CTDSPL2Q05D32 466 aa15.24■□□□□ 0.03
USE1-209ENST00000601592 PDE4BQ07343 736 aa15.24■□□□□ 0.03
USE1-209ENST00000601592 ZNF444Q8N0Y2 327 aaPredicted RBP15.24■□□□□ 0.03
USE1-209ENST00000601592 MCOLN1Q9GZU1 580 aa15.24■□□□□ 0.03
USE1-209ENST00000601592 ARHGEF10LQ9HCE6 1279 aa15.24■□□□□ 0.03
USE1-209ENST00000601592 SLC45A1Q9Y2W3 748 aa15.24■□□□□ 0.03
USE1-209ENST00000601592 RAD21O60216 631 aa15.23■□□□□ 0.03
USE1-209ENST00000601592 RASA1P20936 1047 aa15.23■□□□□ 0.03
USE1-209ENST00000601592 USP14P54578 494 aa15.23■□□□□ 0.03
USE1-209ENST00000601592 KIF22Q14807 665 aa15.23■□□□□ 0.03
USE1-209ENST00000601592 KIAA1683Q9H0B3 1180 aa15.23■□□□□ 0.03
USE1-209ENST00000601592 ASCC2Q9H1I8 757 aaPredicted RBP15.23■□□□□ 0.03
USE1-209ENST00000601592 TOMM22Q9NS69 142 aa15.23■□□□□ 0.03
USE1-209ENST00000601592 EMILIN3Q9NT22 766 aa15.23■□□□□ 0.03
USE1-209ENST00000601592 TRIM17Q9Y577 477 aa15.23■□□□□ 0.03
USE1-209ENST00000601592 ADGRA2Q96PE1 1338 aa15.22■□□□□ 0.03
USE1-209ENST00000601592 FGAP02671 866 aa15.22■□□□□ 0.03
USE1-209ENST00000601592 HAND2P61296 217 aa15.22■□□□□ 0.03
USE1-209ENST00000601592 ALX1Q15699 326 aa15.22■□□□□ 0.03
USE1-209ENST00000601592 C17orf99Q6UX52 265 aa15.22■□□□□ 0.03
USE1-209ENST00000601592 RUFY2Q8WXA3 655 aa15.22■□□□□ 0.03
USE1-209ENST00000601592 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
USE1-209ENST00000601592 A0A1W2PRG0 241 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 CAPN15O75808 1086 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 TSPY3P0CV98 308 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 TSPY8P0CW00 308 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.03
USE1-209ENST00000601592 VCAM1P19320 739 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 FAM47AQ5JRC9 791 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 RRP12Q5JTH9 1297 aaKnown RBP15.21■□□□□ 0.03
USE1-209ENST00000601592 ANKRD13CQ8N6S4 541 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 KANSL2Q9H9L4 492 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 EFCC1Q9HA90 598 aa15.21■□□□□ 0.03
USE1-209ENST00000601592 PARP14Q460N5 1801 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 CHMLP26374 656 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
USE1-209ENST00000601592 ARHGEF6Q15052 776 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 OTOP1Q7RTM1 612 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 SPICE1Q8N0Z3 855 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 C12orf42Q96LP6 360 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 TANGO6Q9C0B7 1094 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 ARHGAP39Q9C0H5 1083 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
USE1-209ENST00000601592 INCENPQ9NQS7 918 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 DOCK3Q8IZD9 2030 aa15.2■□□□□ 0.02
USE1-209ENST00000601592 ZMYM6O95789 1325 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 RAD50Q92878 1312 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 TSPY2A6NKD2 308 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L15C9J2P7 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L13C9JLJ4 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L11C9JVI0 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L18D6R9N7 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L22D6RA61 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L17D6RBQ6 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L19D6RCP7 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L20D6RJB6 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 RANBP6O60518 1105 aaKnown RBP15.19■□□□□ 0.02
USE1-209ENST00000601592 FMNL1O95466 1100 aaPredicted RBP15.19■□□□□ 0.02
USE1-209ENST00000601592 BCRP11274 1271 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
USE1-209ENST00000601592 TFAP4Q01664 338 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 USP17L24Q0WX57 530 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
USE1-209ENST00000601592 ABHD8Q96I13 439 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.19■□□□□ 0.02
USE1-209ENST00000601592 IL25Q9H293 177 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 ANAPC4Q9UJX5 808 aa15.19■□□□□ 0.02
USE1-209ENST00000601592 COL11A1P12107 1806 aaPredicted RBP15.19■□□□□ 0.02
USE1-209ENST00000601592 PSMC4P43686 418 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
USE1-209ENST00000601592 HERVK_113P62684 666 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 CAP1Q01518 475 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms