RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 XRCC5P13010 732 aaKnown RBP20.58■□□□□ 0.89
SCAF1-204ENST00000601038 GABPAQ06546 454 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L24Q0WX57 530 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 POTEEQ6S8J3 1075 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 SOCS4Q8WXH5 440 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 NR2E3Q9Y5X4 410 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 CYP2B6P20813 491 aa20.57■□□□□ 0.88
SCAF1-204ENST00000601038 FXR1P51114 621 aaKnown RBP eCLIP20.57■□□□□ 0.88
SCAF1-204ENST00000601038 ZYXQ15942 572 aaKnown RBP20.57■□□□□ 0.88
SCAF1-204ENST00000601038 CCAR1Q8IX12 1150 aaKnown RBP20.57■□□□□ 0.88
SCAF1-204ENST00000601038 BCL11AQ9H165 835 aa20.57■□□□□ 0.88
SCAF1-204ENST00000601038 HMX1Q9NP08 348 aaPredicted RBP20.57■□□□□ 0.88
SCAF1-204ENST00000601038 MCM9Q9NXL9 1143 aa20.57■□□□□ 0.88
SCAF1-204ENST00000601038 PLXNB2O15031 1838 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 ATP5JP18859 108 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 GUCY1A2P33402 732 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 TRIM32Q13049 653 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 PDE3AQ14432 1141 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 CATSPERGQ6ZRH7 1159 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 ACER1Q8TDN7 264 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 TRIB2Q92519 343 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 EDC3Q96F86 508 aaKnown RBP20.56■□□□□ 0.88
SCAF1-204ENST00000601038 PAGR1Q9BTK6 254 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 PORCNQ9H237 461 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 BOLA2Q9H3K6 86 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 DCP1AQ9NPI6 582 aaPredicted RBP20.56■□□□□ 0.88
SCAF1-204ENST00000601038 PAG1Q9NWQ8 432 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 RABGAP1Q9Y3P9 1069 aa20.56■□□□□ 0.88
SCAF1-204ENST00000601038 CHRDL2Q6WN34 429 aa20.55■□□□□ 0.88
SCAF1-204ENST00000601038 GPR142Q7Z601 462 aa20.55■□□□□ 0.88
SCAF1-204ENST00000601038 TRMT44Q8IYL2 757 aaKnown RBP20.55■□□□□ 0.88
SCAF1-204ENST00000601038 LCORLQ8N3X6 602 aa20.55■□□□□ 0.88
SCAF1-204ENST00000601038 ANKLE1Q8NAG6 615 aa20.55■□□□□ 0.88
SCAF1-204ENST00000601038 SDR42E1Q8WUS8 393 aa20.55■□□□□ 0.88
SCAF1-204ENST00000601038 USP6NLQ92738 828 aa20.55■□□□□ 0.88
SCAF1-204ENST00000601038 CEP290O15078 2479 aa20.55■□□□□ 0.88
SCAF1-204ENST00000601038 DDX60LQ5H9U9 1706 aaKnown RBP20.54■□□□□ 0.88
SCAF1-204ENST00000601038 VCAM1P19320 739 aa20.54■□□□□ 0.88
SCAF1-204ENST00000601038 ADD2P35612 726 aa20.54■□□□□ 0.88
SCAF1-204ENST00000601038 CCNA1P78396 465 aa20.54■□□□□ 0.88
SCAF1-204ENST00000601038 SEPT2Q15019 361 aa20.54■□□□□ 0.88
SCAF1-204ENST00000601038 MAP3K21Q5TCX8 1036 aa20.54■□□□□ 0.88
SCAF1-204ENST00000601038 PLEKHH3Q7Z736 793 aa20.54■□□□□ 0.88
SCAF1-204ENST00000601038 PAWRQ96IZ0 340 aaKnown RBP20.54■□□□□ 0.88
SCAF1-204ENST00000601038 HAUS7Q99871 368 aa20.54■□□□□ 0.88
SCAF1-204ENST00000601038 EVI5O60447 810 aa20.53■□□□□ 0.88
SCAF1-204ENST00000601038 RGS2P41220 211 aa20.53■□□□□ 0.88
SCAF1-204ENST00000601038 MORN1Q5T089 497 aa20.53■□□□□ 0.88
SCAF1-204ENST00000601038 LBX2Q6XYB7 198 aa20.53■□□□□ 0.88
SCAF1-204ENST00000601038 NECAB2Q7Z6G3 386 aa20.53■□□□□ 0.88
SCAF1-204ENST00000601038 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.53■□□□□ 0.884e-7■■■□□ 16.7
SCAF1-204ENST00000601038 ARMT1Q9H993 441 aa20.53■□□□□ 0.88
SCAF1-204ENST00000601038 NAV1Q8NEY1 1877 aa20.52■□□□□ 0.88
SCAF1-204ENST00000601038 CNMDO75829 334 aa20.52■□□□□ 0.88
SCAF1-204ENST00000601038 PRKAR2AP13861 404 aaKnown RBP20.52■□□□□ 0.88
SCAF1-204ENST00000601038 EVX2Q03828 476 aa20.52■□□□□ 0.88
SCAF1-204ENST00000601038 C20orf194Q5TEA3 1177 aa20.52■□□□□ 0.88
SCAF1-204ENST00000601038 LRRCC1Q9C099 1032 aa20.52■□□□□ 0.88
SCAF1-204ENST00000601038 ATP8A2Q9NTI2 1148 aa20.52■□□□□ 0.88
SCAF1-204ENST00000601038 RBM27Q9P2N5 1060 aaKnown RBP20.52■□□□□ 0.88
SCAF1-204ENST00000601038 SWAP70Q9UH65 585 aa20.52■□□□□ 0.88
SCAF1-204ENST00000601038 MPHOSPH10O00566 681 aaKnown RBP20.51■□□□□ 0.87
SCAF1-204ENST00000601038 GLRX3O76003 335 aaKnown RBP20.51■□□□□ 0.87
SCAF1-204ENST00000601038 ZKSCAN1P17029 563 aaPredicted RBP20.51■□□□□ 0.87
SCAF1-204ENST00000601038 SLFNL1Q499Z3 407 aa20.51■□□□□ 0.87
SCAF1-204ENST00000601038 DIS3LQ8TF46 1054 aaKnown RBP20.51■□□□□ 0.87
SCAF1-204ENST00000601038 APBA2Q99767 749 aa20.51■□□□□ 0.87
SCAF1-204ENST00000601038 RPAP3Q9H6T3 665 aaPredicted RBP20.51■□□□□ 0.87
SCAF1-204ENST00000601038 OGDHLQ9ULD0 1010 aa20.51■□□□□ 0.87
SCAF1-204ENST00000601038 A0A1W2PRG0 241 aa20.5■□□□□ 0.87
SCAF1-204ENST00000601038 PRKAB2O43741 272 aa20.5■□□□□ 0.87
SCAF1-204ENST00000601038 MBD4O95243 580 aa20.5■□□□□ 0.87
SCAF1-204ENST00000601038 CYP2D6P10635 497 aa20.5■□□□□ 0.87
SCAF1-204ENST00000601038 CACNB2Q08289 660 aaPredicted RBP20.5■□□□□ 0.87
SCAF1-204ENST00000601038 UBE3CQ15386 1083 aa20.5■□□□□ 0.87
SCAF1-204ENST00000601038 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
SCAF1-204ENST00000601038 NBPF3Q9H094 633 aa20.5■□□□□ 0.87
SCAF1-204ENST00000601038 PRO3102Q9H379 93 aa20.5■□□□□ 0.87
SCAF1-204ENST00000601038 CWC22Q9HCG8 908 aaKnown RBP20.5■□□□□ 0.87
SCAF1-204ENST00000601038 SPDYE16A6NNV3 312 aaPredicted RBP20.49■□□□□ 0.87
SCAF1-204ENST00000601038 MNX1P50219 401 aaPredicted RBP20.49■□□□□ 0.87
SCAF1-204ENST00000601038 MAP2K5Q13163 448 aa20.49■□□□□ 0.87
SCAF1-204ENST00000601038 COG2Q14746 738 aa20.49■□□□□ 0.87
SCAF1-204ENST00000601038 CCL14Q16627 93 aa20.49■□□□□ 0.87
SCAF1-204ENST00000601038 SLC44A5Q8NCS7 719 aa20.49■□□□□ 0.87
SCAF1-204ENST00000601038 HOXC10Q9NYD6 342 aa20.49■□□□□ 0.87
SCAF1-204ENST00000601038 BTBD7Q9P203 1132 aa20.49■□□□□ 0.87
SCAF1-204ENST00000601038 TRIOBPQ9H2D6 2365 aa20.48■□□□□ 0.87
SCAF1-204ENST00000601038 SLC15A5A6NIM6 579 aa20.48■□□□□ 0.87
SCAF1-204ENST00000601038 DYNLL2Q96FJ2 89 aa20.48■□□□□ 0.87
SCAF1-204ENST00000601038 PTPREP23469 700 aa20.47■□□□□ 0.87
SCAF1-204ENST00000601038 C12orf60Q5U649 245 aa20.47■□□□□ 0.87
SCAF1-204ENST00000601038 WDR78Q5VTH9 848 aa20.47■□□□□ 0.87
SCAF1-204ENST00000601038 ZSCAN25Q6NSZ9 544 aa20.47■□□□□ 0.87
SCAF1-204ENST00000601038 AMOTL1Q8IY63 956 aa20.47■□□□□ 0.87
SCAF1-204ENST00000601038 DDRGK1Q96HY6 314 aa20.47■□□□□ 0.87
SCAF1-204ENST00000601038 CCDC17Q96LX7 622 aa20.47■□□□□ 0.87
SCAF1-204ENST00000601038 IVNS1ABPQ9Y6Y0 642 aa20.47■□□□□ 0.87
SCAF1-204ENST00000601038 USP17L12C9JPN9 530 aa20.46■□□□□ 0.87
SCAF1-204ENST00000601038 USP17L21D6R901 530 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms