RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 HMGCS2P54868 508 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 ATP2B2Q01814 1243 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 EVX2Q03828 476 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.42■□□□□ 0.06
SRRM1-223ENST00000600523 AGTPBP1Q9UPW5 1226 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 SLC45A1Q9Y2W3 748 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
SRRM1-223ENST00000600523 ATAD5Q96QE3 1844 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 TSPY2A6NKD2 308 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 RANBP6O60518 1105 aaKnown RBP15.41■□□□□ 0.06
SRRM1-223ENST00000600523 PRDM1O75626 825 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 TBC1D8O95759 1140 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 RASA1P20936 1047 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 OSBPP22059 807 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 LBX1P52954 281 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 CTDSPL2Q05D32 466 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 SH3D19Q5HYK7 790 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 SKAP1Q86WV1 359 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 FAM43AQ8N2R8 423 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 SMCR8Q8TEV9 937 aaPredicted RBP15.41■□□□□ 0.06
SRRM1-223ENST00000600523 PTPN18Q99952 460 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 CFHR5Q9BXR6 569 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 KIAA1683Q9H0B3 1180 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 MYH8P13535 1937 aa15.41■□□□□ 0.06
SRRM1-223ENST00000600523 FOXP2O15409 715 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 HSPA8P11142 646 aaKnown RBP15.4■□□□□ 0.06
SRRM1-223ENST00000600523 HAND2P61296 217 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 IRX3P78415 501 aaPredicted RBP15.4■□□□□ 0.06
SRRM1-223ENST00000600523 JAG1P78504 1218 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 TRDNQ13061 729 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 ARHGEF6Q15052 776 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 RRP12Q5JTH9 1297 aaKnown RBP15.4■□□□□ 0.06
SRRM1-223ENST00000600523 AKNAD1Q5T1N1 836 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 GOPCQ9HD26 462 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 PRDM10Q9NQV6 1147 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 TSKSQ9UJT2 592 aa15.4■□□□□ 0.06
SRRM1-223ENST00000600523 SMIM22K7EJ46 135 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 ORC4O43929 436 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 TFAP4Q01664 338 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 CRHR2Q13324 411 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 ZYXQ15942 572 aaKnown RBP15.39■□□□□ 0.05
SRRM1-223ENST00000600523 NOM1Q5C9Z4 860 aaKnown RBP15.39■□□□□ 0.05
SRRM1-223ENST00000600523 LPAR1Q92633 364 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 ESR2Q92731 530 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 ESYT1Q9BSJ8 1104 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 CNNM2Q9H8M5 875 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 ANO2Q9NQ90 1003 aa15.39■□□□□ 0.05
SRRM1-223ENST00000600523 RAD21O60216 631 aa15.38■□□□□ 0.05
SRRM1-223ENST00000600523 EIF5BO60841 1220 aaKnown RBP15.38■□□□□ 0.05
SRRM1-223ENST00000600523 FKTNO75072 461 aa15.38■□□□□ 0.05
SRRM1-223ENST00000600523 TTLL1O95922 423 aa15.38■□□□□ 0.05
SRRM1-223ENST00000600523 EEF2P13639 858 aaKnown RBP15.38■□□□□ 0.05
SRRM1-223ENST00000600523 KIF22Q14807 665 aa15.38■□□□□ 0.05
SRRM1-223ENST00000600523 SHROOM1Q2M3G4 852 aaPredicted RBP15.38■□□□□ 0.05
SRRM1-223ENST00000600523 NEDD1Q8NHV4 660 aa15.38■□□□□ 0.05
SRRM1-223ENST00000600523 STAG1Q8WVM7 1258 aa15.38■□□□□ 0.05
SRRM1-223ENST00000600523 KRT23Q9C075 422 aa15.38■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L15C9J2P7 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L13C9JLJ4 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L11C9JVI0 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L18D6R9N7 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L22D6RA61 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L17D6RBQ6 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L19D6RCP7 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L20D6RJB6 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 GPR25O00155 361 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 TLR2O60603 784 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 GUCY1A2P33402 732 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 USP17L24Q0WX57 530 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 CCDC178Q5BJE1 867 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 FAM47AQ5JRC9 791 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 RNF20Q5VTR2 975 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 GPAT2Q6NUI2 795 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 IQCA1Q86XH1 822 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 ACER1Q8TDN7 264 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 GTF3C2Q8WUA4 911 aaPredicted RBP15.37■□□□□ 0.05
SRRM1-223ENST00000600523 C12orf42Q96LP6 360 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 NYAP2Q9P242 653 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 SYNPO2Q9UMS6 1093 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.37■□□□□ 0.05
SRRM1-223ENST00000600523 TMX2Q9Y320 296 aa15.37■□□□□ 0.05
SRRM1-223ENST00000600523 REC8O95072 547 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 FGRP09769 529 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 GCLCP48506 637 aaPredicted RBP15.36■□□□□ 0.05
SRRM1-223ENST00000600523 MOGSQ13724 837 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 TREML2Q5T2D2 321 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 RALYLQ86SE5 291 aaKnown RBP15.36■□□□□ 0.05
SRRM1-223ENST00000600523 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 ERO1AQ96HE7 468 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 VCPKMTQ9H867 229 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 EMILIN3Q9NT22 766 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 MTMR4Q9NYA4 1195 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 CLIP2Q9UDT6 1046 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 STX8Q9UNK0 236 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 PLIN4Q96Q06 1357 aa15.36■□□□□ 0.05
SRRM1-223ENST00000600523 HOXA7P31268 230 aaPredicted RBP15.35■□□□□ 0.05
SRRM1-223ENST00000600523 SP3Q02447 781 aa15.35■□□□□ 0.05
SRRM1-223ENST00000600523 CEP95Q96GE4 821 aa15.35■□□□□ 0.05
SRRM1-223ENST00000600523 TANGO6Q9C0B7 1094 aa15.35■□□□□ 0.05
SRRM1-223ENST00000600523 PHIPQ8WWQ0 1821 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms