RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 GPAT2Q6NUI2 795 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 GADL1Q6ZQY3 521 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 FEZ1Q99689 392 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 KIAA1683Q9H0B3 1180 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
SNRPA-208ENST00000600456 PDHXO00330 501 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 ZNF213O14771 459 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 PRDM1O75626 825 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 USP14P54578 494 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 ICA1Q05084 483 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNRPA-208ENST00000600456 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
SNRPA-208ENST00000600456 IMMTQ16891 758 aaKnown RBP16.39■□□□□ 0.21
SNRPA-208ENST00000600456 USP17L2Q6R6M4 530 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 STK11IPQ8N1F8 1099 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 C12orf42Q96LP6 360 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 RNF41Q9H4P4 317 aaPredicted RBP16.39■□□□□ 0.21
SNRPA-208ENST00000600456 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 ARHGEF10LQ9HCE6 1279 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
SNRPA-208ENST00000600456 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
SNRPA-208ENST00000600456 TBC1D8O95759 1140 aa16.38■□□□□ 0.21
SNRPA-208ENST00000600456 CRHR2Q13324 411 aa16.38■□□□□ 0.21
SNRPA-208ENST00000600456 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
SNRPA-208ENST00000600456 NEDD1Q8NHV4 660 aa16.38■□□□□ 0.21
SNRPA-208ENST00000600456 STAG1Q8WVM7 1258 aa16.38■□□□□ 0.21
SNRPA-208ENST00000600456 PARK7Q99497 189 aaKnown RBP16.38■□□□□ 0.21
SNRPA-208ENST00000600456 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNRPA-208ENST00000600456 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
SNRPA-208ENST00000600456 MYH8P13535 1937 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 LBX1P52954 281 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 HAND2P61296 217 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 AKNAD1Q5T1N1 836 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 ACER1Q8TDN7 264 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 TSKSQ9UJT2 592 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 SYNPO2Q9UMS6 1093 aa16.37■□□□□ 0.21
SNRPA-208ENST00000600456 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 A0A1W2PRG0 241 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 TFAP4Q01664 338 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 SIAH1Q8IUQ4 282 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 NBPF3Q9H094 633 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 TMX2Q9Y320 296 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 PTPRFP10586 1907 aa16.36■□□□□ 0.21
SNRPA-208ENST00000600456 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
SNRPA-208ENST00000600456 TSPY2A6NKD2 308 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 GPR25O00155 361 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 TLR2O60603 784 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
SNRPA-208ENST00000600456 OSBPP22059 807 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 HOXA7P31268 230 aaPredicted RBP16.35■□□□□ 0.21
SNRPA-208ENST00000600456 PTH1RQ03431 593 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 TREML2Q5T2D2 321 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 TBC1D10CQ8IV04 446 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 LPAR1Q92633 364 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 MTMR4Q9NYA4 1195 aa16.35■□□□□ 0.21
SNRPA-208ENST00000600456 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 RANBP6O60518 1105 aaKnown RBP16.34■□□□□ 0.21
SNRPA-208ENST00000600456 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
SNRPA-208ENST00000600456 FAM47AQ5JRC9 791 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 CLEC10AQ8IUN9 316 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 ESR2Q92731 530 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 LSG1Q9H089 658 aaKnown RBP16.34■□□□□ 0.21
SNRPA-208ENST00000600456 R3HDMLQ9H3Y0 253 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 VCPKMTQ9H867 229 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 TOMM22Q9NS69 142 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 TACC3Q9Y6A5 838 aa16.34■□□□□ 0.21
SNRPA-208ENST00000600456 TTLL1O95922 423 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 VCAM1P19320 739 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 ATP2B2Q01814 1243 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 DGKZQ13574 1117 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 RRP12Q5JTH9 1297 aaKnown RBP16.33■□□□□ 0.2
SNRPA-208ENST00000600456 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
SNRPA-208ENST00000600456 MKL1Q969V6 931 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 KRT23Q9C075 422 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 GOPCQ9HD26 462 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 ANO2Q9NQ90 1003 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 ADGRA2Q96PE1 1338 aa16.33■□□□□ 0.2
SNRPA-208ENST00000600456 USP17L15C9J2P7 530 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 USP17L13C9JLJ4 530 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 USP17L11C9JVI0 530 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 USP17L18D6R9N7 530 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 USP17L22D6RA61 530 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 USP17L17D6RBQ6 530 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 874.3 ms