RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 HERVK_113P62684 666 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
IRF3-226ENST00000600453 SHROOM1Q2M3G4 852 aaPredicted RBP18.79■□□□□ 0.6
IRF3-226ENST00000600453 GIMAP6Q6P9H5 292 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 TMEM179Q6ZVK1 233 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 GPRC5AQ8NFJ5 357 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 APPBP2Q92624 585 aa18.79■□□□□ 0.6
IRF3-226ENST00000600453 NAV1Q8NEY1 1877 aa18.78■□□□□ 0.6
IRF3-226ENST00000600453 ADCY3O60266 1144 aa18.78■□□□□ 0.6
IRF3-226ENST00000600453 SLFNL1Q499Z3 407 aa18.78■□□□□ 0.6
IRF3-226ENST00000600453 ANKRD45Q5TZF3 282 aa18.78■□□□□ 0.6
IRF3-226ENST00000600453 CCAR1Q8IX12 1150 aaKnown RBP18.78■□□□□ 0.6
IRF3-226ENST00000600453 STRBPQ96SI9 672 aaKnown RBP18.78■□□□□ 0.6
IRF3-226ENST00000600453 EN2P19622 333 aaPredicted RBP18.77■□□□□ 0.6
IRF3-226ENST00000600453 MX1P20591 662 aa18.77■□□□□ 0.6
IRF3-226ENST00000600453 SEPT2Q15019 361 aa18.77■□□□□ 0.6
IRF3-226ENST00000600453 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.6
IRF3-226ENST00000600453 SH2D4AQ9H788 454 aa18.77■□□□□ 0.6
IRF3-226ENST00000600453 ARPP21Q9UBL0 812 aaPredicted RBP18.77■□□□□ 0.6
IRF3-226ENST00000600453 GABRQQ9UN88 632 aa18.77■□□□□ 0.6
IRF3-226ENST00000600453 ZSWIM8A7E2V4 1837 aa18.77■□□□□ 0.59
IRF3-226ENST00000600453 DOCK3Q8IZD9 2030 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 RBBP6Q7Z6E9 1792 aaKnown RBP18.76■□□□□ 0.59
IRF3-226ENST00000600453 CYP2D6P10635 497 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 MAPK4P31152 587 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 CDK8P49336 464 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 ZYXQ15942 572 aaKnown RBP18.76■□□□□ 0.59
IRF3-226ENST00000600453 SBK1Q52WX2 424 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 CATSPERGQ6ZRH7 1159 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 C16orf86Q6ZW13 317 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 ARHGEF10LQ9HCE6 1279 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 HOXC10Q9NYD6 342 aa18.76■□□□□ 0.59
IRF3-226ENST00000600453 MYCP01106 439 aaPredicted RBP18.75■□□□□ 0.59
IRF3-226ENST00000600453 GUCY1A2P33402 732 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 CCNA1P78396 465 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 TSHZ3Q63HK5 1081 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 PI4K2BQ8TCG2 481 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 ACER1Q8TDN7 264 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 DYNLL2Q96FJ2 89 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 ZNF287Q9HBT7 754 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 RBPJLQ9UBG7 517 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 RABGAP1Q9Y3P9 1069 aa18.75■□□□□ 0.59
IRF3-226ENST00000600453 GJB1P08034 283 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 VCAM1P19320 739 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 ERVK-9P63128 1117 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 ERVK-24P63145 666 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 TICAM2Q86XR7 235 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 LPAR1Q92633 364 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 OSBP2Q969R2 916 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 FSD1Q9BTV5 496 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 NACAP1Q9BZK3 213 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 RNF208Q9H0X6 261 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
IRF3-226ENST00000600453 BAZ2AQ9UIF9 1905 aaKnown RBP18.74■□□□□ 0.59
IRF3-226ENST00000600453 DDX60LQ5H9U9 1706 aaKnown RBP18.74■□□□□ 0.59
IRF3-226ENST00000600453 GSG1L2A8MUP6 293 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 PATL2C9JE40 543 aaKnown RBP18.73■□□□□ 0.59
IRF3-226ENST00000600453 GPAA1O43292 621 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 CHGBP05060 677 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 APPP05067 770 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 CCL5P13501 91 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 COG2Q14746 738 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 MTFR1Q15390 333 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 LBX2Q6XYB7 198 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 SLC44A5Q8NCS7 719 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 NUDT12Q9BQG2 462 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 CWC22Q9HCG8 908 aaKnown RBP18.73■□□□□ 0.59
IRF3-226ENST00000600453 GJD2Q9UKL4 321 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 HTTP42858 3142 aa18.73■□□□□ 0.59
IRF3-226ENST00000600453 MYH8P13535 1937 aa18.72■□□□□ 0.59
IRF3-226ENST00000600453 ICA1Q05084 483 aa18.72■□□□□ 0.59
IRF3-226ENST00000600453 PRPF38BQ5VTL8 546 aaKnown RBP18.72■□□□□ 0.59
IRF3-226ENST00000600453 TRMT44Q8IYL2 757 aaKnown RBP18.72■□□□□ 0.59
IRF3-226ENST00000600453 SOCS4Q8WXH5 440 aa18.72■□□□□ 0.59
IRF3-226ENST00000600453 PAGR1Q9BTK6 254 aa18.72■□□□□ 0.59
IRF3-226ENST00000600453 RPAP3Q9H6T3 665 aaPredicted RBP18.72■□□□□ 0.59
IRF3-226ENST00000600453 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
IRF3-226ENST00000600453 TXNRD2Q9NNW7 524 aa18.72■□□□□ 0.59
IRF3-226ENST00000600453 STAP2Q9UGK3 403 aa18.72■□□□□ 0.59
IRF3-226ENST00000600453 TMX2Q9Y320 296 aa18.72■□□□□ 0.59
IRF3-226ENST00000600453 CYP2D7A0A087X1C5 515 aa18.71■□□□□ 0.59
IRF3-226ENST00000600453 MINDY4BA8MYZ0 360 aa18.71■□□□□ 0.59
IRF3-226ENST00000600453 XRCC5P13010 732 aaKnown RBP18.71■□□□□ 0.59
IRF3-226ENST00000600453 AKR1B1P15121 316 aa18.71■□□□□ 0.59
IRF3-226ENST00000600453 GJA8P48165 433 aa18.71■□□□□ 0.59
IRF3-226ENST00000600453 TDO2P48775 406 aa18.71■□□□□ 0.59
IRF3-226ENST00000600453 EVX2Q03828 476 aa18.71■□□□□ 0.59
IRF3-226ENST00000600453 Q3C1V9 767 aa18.71■□□□□ 0.59
IRF3-226ENST00000600453 OTUD7AQ8TE49 926 aaPredicted RBP18.71■□□□□ 0.59
IRF3-226ENST00000600453 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
IRF3-226ENST00000600453 A0A1W2PRG0 241 aa18.7■□□□□ 0.58
IRF3-226ENST00000600453 HMGCRP04035 888 aa18.7■□□□□ 0.58
IRF3-226ENST00000600453 INHAP05111 366 aa18.7■□□□□ 0.58
IRF3-226ENST00000600453 SLC3A2P08195 630 aaKnown RBP18.7■□□□□ 0.58
IRF3-226ENST00000600453 ELNP15502 786 aa18.7■□□□□ 0.58
IRF3-226ENST00000600453 PLEKHH3Q7Z736 793 aa18.7■□□□□ 0.58
IRF3-226ENST00000600453 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
IRF3-226ENST00000600453 PDE1AP54750 535 aa18.69■□□□□ 0.58
IRF3-226ENST00000600453 ZMYM1Q5SVZ6 1142 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms