RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FBXO33Q7Z6M2 555 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 MYRIPQ8NFW9 859 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 CPLX3Q8WVH0 158 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 BLZF1Q9H2G9 400 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 HEATR3Q7Z4Q2 680 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 AMOTL1Q8IY63 956 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 ZBTB22O15209 634 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 PPP6R2O75170 966 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 DHX8Q14562 1220 aaKnown RBP13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 POSTNQ15063 836 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 SEC23AQ15436 765 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 PTPN14Q15678 1187 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 VPS72Q15906 364 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 UIMC1Q96RL1 719 aa13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 CCDC94Q9BW85 323 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 HOOK1Q9UJC3 728 aaKnown RBP13.19□□□□□ -0.3
ARHGEF1-220ENST00000600274 MYL5Q02045 173 aa13.18□□□□□ -0.3
ARHGEF1-220ENST00000600274 STAG2Q8N3U4 1231 aa13.18□□□□□ -0.3
ARHGEF1-220ENST00000600274 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.18□□□□□ -0.3
ARHGEF1-220ENST00000600274 G3V3G9 751 aa13.18□□□□□ -0.3
ARHGEF1-220ENST00000600274 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
ARHGEF1-220ENST00000600274 SPTLC3Q9NUV7 552 aa13.18□□□□□ -0.3
ARHGEF1-220ENST00000600274 SRCAPQ6ZRS2 3230 aa13.18□□□□□ -0.3
ARHGEF1-220ENST00000600274 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF1-220ENST00000600274 NRDCO43847 1150 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 TRIM37O94972 964 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 CEP135Q66GS9 1140 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 CCDC112Q8NEF3 446 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 MYH3P11055 1940 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 SYMPKQ92797 1274 aaKnown RBP13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 SHISA4Q96DD7 197 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 EEF2KMTQ96G04 330 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 NFE2L3Q9Y4A8 694 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 SPEF2Q9C093 1822 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 TROAPQ12815 778 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 PTGDRQ13258 359 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 FOXP1Q9H334 677 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 FBXO2Q9UK22 296 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
ARHGEF1-220ENST00000600274 TOP1P11387 765 aaKnown RBP13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 PKN1Q16512 942 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 PLCD1P51178 756 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 RBM6P78332 1123 aaKnown RBP13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 MAN1B1Q9UKM7 699 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 ERICH4A6NGS2 130 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 PTPREP23469 700 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 GPSM2P81274 684 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 SARM1Q6SZW1 724 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
ARHGEF1-220ENST00000600274 CNTNAP4Q9C0A0 1308 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 STK36Q9NRP7 1315 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 BAG3O95817 575 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 SPTY2D1Q68D10 685 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 ZNF804AQ7Z570 1209 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 SAMSN1Q9NSI8 373 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 BTDP43251 543 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 GTF2IP78347 998 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 FMR1Q06787 632 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■■□□ 15.1
ARHGEF1-220ENST00000600274 NCAPHQ15003 741 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 HPSEQ9Y251 543 aa13.15□□□□□ -0.3
ARHGEF1-220ENST00000600274 SERPINB2P05120 415 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 BMP6P22004 513 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 ADKP55263 362 aaKnown RBP13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 GRAPQ13588 217 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 MSL1Q68DK7 614 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 PRR5LQ6MZQ0 368 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 MXD3Q9BW11 206 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 MYH7P12883 1935 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 SLURP2P0DP57 97 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 SCG2P13521 617 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 ATP8A2Q9NTI2 1148 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 CGNQ9P2M7 1197 aaKnown RBP13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 BAZ2AQ9UIF9 1905 aaKnown RBP13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 AFF2P51816 1311 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 A0A087X0B3 334 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 CCDC194A0A1B0GVG4 234 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 SCNN1DP51172 638 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 UBA5Q9GZZ9 404 aa13.14□□□□□ -0.31
ARHGEF1-220ENST00000600274 RBM28Q9NW13 759 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 1769.4 ms