RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FAM43AQ8N2R8 423 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 IL17RBQ9NRM6 502 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 RNF186Q9NXI6 227 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 CTNNA3Q9UI47 895 aa16.32■□□□□ 0.2
VRK3-219ENST00000600137 RBM8AQ9Y5S9 174 aaKnown RBP16.32■□□□□ 0.2
VRK3-219ENST00000600137 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
VRK3-219ENST00000600137 PLIN4Q96Q06 1357 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 MPHOSPH10O00566 681 aaKnown RBP16.31■□□□□ 0.2
VRK3-219ENST00000600137 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
VRK3-219ENST00000600137 NOVP48745 357 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 TFAP4Q01664 338 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 SREBF2Q12772 1141 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
VRK3-219ENST00000600137 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 AS3MTQ9HBK9 375 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 LOC285556D6RIA3 1793 aa16.31■□□□□ 0.2
VRK3-219ENST00000600137 NEDD4P46934 1319 aa16.3■□□□□ 0.2
VRK3-219ENST00000600137 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
VRK3-219ENST00000600137 COL9A3Q14050 684 aaPredicted RBP16.3■□□□□ 0.2
VRK3-219ENST00000600137 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
VRK3-219ENST00000600137 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
VRK3-219ENST00000600137 STOX1Q6ZVD7 989 aa16.3■□□□□ 0.2
VRK3-219ENST00000600137 CFHR5Q9BXR6 569 aa16.3■□□□□ 0.2
VRK3-219ENST00000600137 KIAA1683Q9H0B3 1180 aa16.3■□□□□ 0.2
VRK3-219ENST00000600137 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
VRK3-219ENST00000600137 ZNF287Q9HBT7 754 aa16.3■□□□□ 0.2
VRK3-219ENST00000600137 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
VRK3-219ENST00000600137 C19orf81C9J6K1 198 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 PCP11498 1178 aaKnown RBP16.29■□□□□ 0.2
VRK3-219ENST00000600137 HMGCS2P54868 508 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 MTMR2Q13614 643 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 TREML2Q5T2D2 321 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 MKL1Q969V6 931 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 CEP95Q96GE4 821 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 C12orf42Q96LP6 360 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 MTMR4Q9NYA4 1195 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 NYAP2Q9P242 653 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 TMX2Q9Y320 296 aa16.29■□□□□ 0.2
VRK3-219ENST00000600137 SLC27A2O14975 620 aa16.28■□□□□ 0.2
VRK3-219ENST00000600137 FOXN1O15353 648 aa16.28■□□□□ 0.2
VRK3-219ENST00000600137 NMT2O60551 498 aa16.28■□□□□ 0.2
VRK3-219ENST00000600137 TRPA1O75762 1119 aa16.28■□□□□ 0.2
VRK3-219ENST00000600137 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
VRK3-219ENST00000600137 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
VRK3-219ENST00000600137 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
VRK3-219ENST00000600137 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
VRK3-219ENST00000600137 PROCA1Q8NCQ7 364 aaPredicted RBP16.28■□□□□ 0.2
VRK3-219ENST00000600137 KCNB2Q92953 911 aa16.28■□□□□ 0.2
VRK3-219ENST00000600137 TCP11L1Q9NUJ3 509 aa16.28■□□□□ 0.2
VRK3-219ENST00000600137 E7EWF7 191 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 RANBP6O60518 1105 aaKnown RBP16.27■□□□□ 0.2
VRK3-219ENST00000600137 TSPY3P0CV98 308 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 TSPY8P0CW00 308 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 ICA1Q05084 483 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 RCSD1Q6JBY9 416 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 USP17L2Q6R6M4 530 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.2
VRK3-219ENST00000600137 ZCCHC17Q9NP64 241 aaKnown RBP16.27■□□□□ 0.2
VRK3-219ENST00000600137 SAGE1Q9NXZ1 904 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.2
VRK3-219ENST00000600137 MYH4Q9Y623 1939 aa16.27■□□□□ 0.19
VRK3-219ENST00000600137 B4E1Z4 1266 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 PDHXO00330 501 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 CA12O43570 354 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 HOXA7P31268 230 aaPredicted RBP16.26■□□□□ 0.19
VRK3-219ENST00000600137 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 RRP12Q5JTH9 1297 aaKnown RBP16.26■□□□□ 0.19
VRK3-219ENST00000600137 POTEEQ6S8J3 1075 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
VRK3-219ENST00000600137 RLFQ13129 1914 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 ADGRA2Q96PE1 1338 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 TSPY2A6NKD2 308 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 KDM4AO75164 1064 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 SEC24BO95487 1268 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 ALDH1A1P00352 501 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 CRHR2Q13324 411 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 ZYXQ15942 572 aaKnown RBP16.25■□□□□ 0.19
VRK3-219ENST00000600137 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 VCPKMTQ9H867 229 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 TSKSQ9UJT2 592 aa16.25■□□□□ 0.19
VRK3-219ENST00000600137 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
VRK3-219ENST00000600137 TTLL1O95922 423 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
VRK3-219ENST00000600137 HSPA4P34932 840 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 NT5C2P49902 561 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 USP14P54578 494 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
VRK3-219ENST00000600137 OTUD7BQ6GQQ9 843 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms