RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 LAMA4Q16363 1823 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 RLFQ13129 1914 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 OSBPP22059 807 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 PSMC4P43686 418 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 GCLCP48506 637 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 CDK8P49336 464 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 RGS19P49795 217 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 USP14P54578 494 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 SEPT2Q15019 361 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 RAB3GAP1Q15042 981 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 FAM110CQ1W6H9 321 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 B4GALNT3Q6L9W6 998 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L2Q6R6M4 530 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 TMEM179Q6ZVK1 233 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 ACER1Q8TDN7 264 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 ARMC5Q96C12 935 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 TRIM47Q96LD4 638 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 CCDC17Q96LX7 622 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 SEC62Q99442 399 aaKnown RBP9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 FEZ1Q99689 392 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 ASCC2Q9H1I8 757 aaPredicted RBP9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 PTCH2Q9Y6C5 1203 aa9.56□□□□□ -0.88
CHMP2A-205ENST00000600006 MYH4Q9Y623 1939 aa9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 PATL2C9JE40 543 aaKnown RBP9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 MPHOSPH10O00566 681 aaKnown RBP9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 AKR1B1P15121 316 aa9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 TDO2P48775 406 aa9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 FCGRTP55899 365 aa9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 IRX3P78415 501 aaPredicted RBP9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 PLEKHM2Q8IWE5 1019 aa9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 IFNL3Q8IZI9 196 aa9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 MORF4L1Q9UBU8 362 aa9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 SRRDQ9UH36 339 aa9.55□□□□□ -0.88
CHMP2A-205ENST00000600006 A0A1W2PRG0 241 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 FOXP2O15409 715 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 FMNL1O95466 1100 aaPredicted RBP9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 VCAM1P19320 739 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 SOX10P56693 466 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 HERVK_113P62684 666 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 ICA1Q05084 483 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 ZYXQ15942 572 aaKnown RBP9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 ANKRD13CQ8N6S4 541 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 GTF3C2Q8WUA4 911 aaPredicted RBP9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 NACAP1Q9BZK3 213 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 HELLSQ9NRZ9 838 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 DOCK3Q8IZD9 2030 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 MYPNQ86TC9 1320 aa9.54□□□□□ -0.88
CHMP2A-205ENST00000600006 PLIN4Q96Q06 1357 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 A0A0D9SFI3 127 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 MINDY4BA8MYZ0 360 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 RASA1P20936 1047 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 HOXD10P28358 340 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 PRKCZQ05513 592 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 CCDC129Q6ZRS4 1044 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 CLEC10AQ8IUN9 316 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 SIAH1Q8IUQ4 282 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 ZNF333Q96JL9 665 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 P2RX7Q99572 595 aaKnown RBP9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 NAPBQ9H115 298 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 SH2D4AQ9H788 454 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 TMX2Q9Y320 296 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 ZNF236Q9UL36 1845 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 HTTP42858 3142 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 ZMYM6O95789 1325 aa9.53□□□□□ -0.88
CHMP2A-205ENST00000600006 COL11A1P12107 1806 aaPredicted RBP9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 TRIM6-TRIM34B2RNG4 842 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 TNPO2O14787 897 aaKnown RBP9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 APPP05067 770 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 PDE4AP27815 886 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 NMIQ13287 307 aaPredicted RBP9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 IRF5Q13568 498 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 SLC9C1Q4G0N8 1177 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 VPS53Q5VIR6 699 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 LBX2Q6XYB7 198 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 CATSPERGQ6ZRH7 1159 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 LPAR1Q92633 364 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 FAM227BQ96M60 508 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 RPAP3Q9H6T3 665 aaPredicted RBP9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 KANSL2Q9H9L4 492 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 ZNF287Q9HBT7 754 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 TXNRD2Q9NNW7 524 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 RBPJLQ9UBG7 517 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 GABRQQ9UN88 632 aa9.52□□□□□ -0.89
CHMP2A-205ENST00000600006 IGKV6D-41A0A0C4DH26 115 aa9.51□□□□□ -0.89
CHMP2A-205ENST00000600006 SPDYE16A6NNV3 312 aaPredicted RBP9.51□□□□□ -0.89
CHMP2A-205ENST00000600006 FLT3LGP49771 235 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms