RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
LIG1-218ENST00000599322 ANKRD13CQ8N6S4 541 aa16.91■□□□□ 0.3
LIG1-218ENST00000599322 OSBP2Q969R2 916 aa16.91■□□□□ 0.3
LIG1-218ENST00000599322 COA7Q96BR5 231 aa16.91■□□□□ 0.3
LIG1-218ENST00000599322 TMEM106CQ9BVX2 250 aa16.91■□□□□ 0.3
LIG1-218ENST00000599322 ASCC2Q9H1I8 757 aaPredicted RBP16.91■□□□□ 0.3
LIG1-218ENST00000599322 PTCH2Q9Y6C5 1203 aa16.91■□□□□ 0.3
LIG1-218ENST00000599322 NAV1Q8NEY1 1877 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 PATL2C9JE40 543 aaKnown RBP16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 TNPO2O14787 897 aaKnown RBP16.9■□□□□ 0.3
LIG1-218ENST00000599322 EN2P19622 333 aaPredicted RBP16.9■□□□□ 0.3
LIG1-218ENST00000599322 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
LIG1-218ENST00000599322 CDK8P49336 464 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 ZYXQ15942 572 aaKnown RBP16.9■□□□□ 0.3
LIG1-218ENST00000599322 FAM110CQ1W6H9 321 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 SBK1Q52WX2 424 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 CTR9Q6PD62 1173 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 DYNLL2Q96FJ2 89 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 ZNF333Q96JL9 665 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 ARHGAP39Q9C0H5 1083 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
LIG1-218ENST00000599322 SRRDQ9UH36 339 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 ATAD5Q96QE3 1844 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 ADGRA2Q96PE1 1338 aa16.9■□□□□ 0.3
LIG1-218ENST00000599322 CHGBP05060 677 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 JAG1P78504 1218 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 SEPT2Q15019 361 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 C16orf86Q6ZW13 317 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 RILPL2Q969X0 211 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 TRIM47Q96LD4 638 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 NAPBQ9H115 298 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 PCDH10Q9P2E7 1040 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 BIN2Q9UBW5 565 aaPredicted RBP16.89■□□□□ 0.29
LIG1-218ENST00000599322 MYH7P12883 1935 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 MYPNQ86TC9 1320 aa16.89■□□□□ 0.29
LIG1-218ENST00000599322 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
LIG1-218ENST00000599322 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
LIG1-218ENST00000599322 NUCB1Q02818 461 aa16.88■□□□□ 0.29
LIG1-218ENST00000599322 ZMYM1Q5SVZ6 1142 aa16.88■□□□□ 0.29
LIG1-218ENST00000599322 ZNF444Q8N0Y2 327 aaPredicted RBP16.88■□□□□ 0.29
LIG1-218ENST00000599322 C12orf42Q96LP6 360 aa16.88■□□□□ 0.29
LIG1-218ENST00000599322 SIPA1L1O43166 1804 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 CYP2D7A0A087X1C5 515 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 IGHDP01880 384 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 MFAP1P55081 439 aaKnown RBP16.87■□□□□ 0.29
LIG1-218ENST00000599322 ICA1Q05084 483 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 PDE4BQ07343 736 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 SHROOM1Q2M3G4 852 aaPredicted RBP16.87■□□□□ 0.29
LIG1-218ENST00000599322 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 SLC44A5Q8NCS7 719 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 GPRC5AQ8NFJ5 357 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 P2RX7Q99572 595 aaKnown RBP16.87■□□□□ 0.29
LIG1-218ENST00000599322 KANSL2Q9H9L4 492 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 HELLSQ9NRZ9 838 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 EMILIN3Q9NT22 766 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 SALL3Q9BXA9 1300 aa16.87■□□□□ 0.29
LIG1-218ENST00000599322 M0R2C6 588 aa16.86■□□□□ 0.29
LIG1-218ENST00000599322 CTGFP29279 349 aa16.86■□□□□ 0.29
LIG1-218ENST00000599322 HERVK_113P62684 666 aa16.86■□□□□ 0.29
LIG1-218ENST00000599322 UBXN2AP68543 259 aa16.86■□□□□ 0.29
LIG1-218ENST00000599322 CCNA1P78396 465 aa16.86■□□□□ 0.29
LIG1-218ENST00000599322 IRX6P78412 446 aaPredicted RBP16.86■□□□□ 0.29
LIG1-218ENST00000599322 ACER1Q8TDN7 264 aa16.86■□□□□ 0.29
LIG1-218ENST00000599322 HIP1O00291 1037 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 AKR1B1P15121 316 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 GRK4P32298 578 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 STK11IPQ8N1F8 1099 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 SLAIN1Q8ND83 568 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 LPAR1Q92633 364 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 PAGR1Q9BTK6 254 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 GOPCQ9HD26 462 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 HOXC10Q9NYD6 342 aa16.85■□□□□ 0.29
LIG1-218ENST00000599322 DOCK3Q8IZD9 2030 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 RAD21O60216 631 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 VCAM1P19320 739 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 MCMDC2Q4G0Z9 681 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 PPP4R3BQ5MIZ7 849 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 CATSPERGQ6ZRH7 1159 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 SH3TC2Q8TF17 1288 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
LIG1-218ENST00000599322 TANGO6Q9C0B7 1094 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 OSBPL3Q9H4L5 887 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 RPAP3Q9H6T3 665 aaPredicted RBP16.84■□□□□ 0.29
LIG1-218ENST00000599322 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
LIG1-218ENST00000599322 LOC285556D6RIA3 1793 aa16.83■□□□□ 0.28
LIG1-218ENST00000599322 MYCP01106 439 aaPredicted RBP16.83■□□□□ 0.28
LIG1-218ENST00000599322 MAPK4P31152 587 aa16.83■□□□□ 0.28
LIG1-218ENST00000599322 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
LIG1-218ENST00000599322 EVX2Q03828 476 aa16.83■□□□□ 0.28
LIG1-218ENST00000599322 PRKCZQ05513 592 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms