RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 TRPM4Q8TD43 1214 aa27.25■■□□□ 1.95
SYMPK-212ENST00000598896 PGAP2Q9UHJ9 254 aa27.25■■□□□ 1.95
SYMPK-212ENST00000598896 IGKV6D-41A0A0C4DH26 115 aa27.24■■□□□ 1.95
SYMPK-212ENST00000598896 DDAH1O94760 285 aa27.24■■□□□ 1.95
SYMPK-212ENST00000598896 EPS15P42566 896 aa27.24■■□□□ 1.95
SYMPK-212ENST00000598896 NOVP48745 357 aa27.24■■□□□ 1.95
SYMPK-212ENST00000598896 SHROOM1Q2M3G4 852 aaPredicted RBP27.23■■□□□ 1.95
SYMPK-212ENST00000598896 CLEC10AQ8IUN9 316 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 TMEM47Q9BQJ4 181 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 KAT14Q9H8E8 782 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 MTMR6Q9Y217 621 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 FAM184AQ8NB25 1140 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 PNMA1Q8ND90 353 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 TRIM34Q9BYJ4 488 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 HACL1Q9UJ83 578 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 TAOK2Q9UL54 1235 aa27.23■■□□□ 1.95
SYMPK-212ENST00000598896 WDR33Q9C0J8 1336 aaKnown RBP27.23■■□□□ 1.95
SYMPK-212ENST00000598896 NFKBIBQ15653 356 aa27.22■■□□□ 1.95
SYMPK-212ENST00000598896 CMTR1Q8N1G2 835 aaKnown RBP27.22■■□□□ 1.95
SYMPK-212ENST00000598896 PHKBQ93100 1093 aa27.22■■□□□ 1.95
SYMPK-212ENST00000598896 MTMR4Q9NYA4 1195 aa27.22■■□□□ 1.95
SYMPK-212ENST00000598896 PDCP20941 246 aa27.21■■□□□ 1.95
SYMPK-212ENST00000598896 RASA3Q14644 834 aa27.21■■□□□ 1.95
SYMPK-212ENST00000598896 CERKLQ49MI3 558 aaPredicted RBP27.21■■□□□ 1.95
SYMPK-212ENST00000598896 CCDC17Q96LX7 622 aa27.21■■□□□ 1.95
SYMPK-212ENST00000598896 CALM1P0DP23 149 aa27.21■■□□□ 1.95
SYMPK-212ENST00000598896 CALM2P0DP24 149 aa27.21■■□□□ 1.95
SYMPK-212ENST00000598896 CALM3P0DP25 149 aa27.21■■□□□ 1.95
SYMPK-212ENST00000598896 ORC3Q9UBD5 711 aaPredicted RBP27.21■■□□□ 1.95
SYMPK-212ENST00000598896 HERC5Q9UII4 1024 aaKnown RBP27.21■■□□□ 1.95
SYMPK-212ENST00000598896 VPS37CA5D8V6 355 aaPredicted RBP27.2■■□□□ 1.94
SYMPK-212ENST00000598896 MPHOSPH10O00566 681 aaKnown RBP27.2■■□□□ 1.94
SYMPK-212ENST00000598896 CDKL5O76039 1030 aa27.2■■□□□ 1.94
SYMPK-212ENST00000598896 ZSCAN22P10073 491 aaPredicted RBP27.2■■□□□ 1.94
SYMPK-212ENST00000598896 RRP1BQ14684 758 aaKnown RBP27.2■■□□□ 1.94
SYMPK-212ENST00000598896 CDC37L1Q7L3B6 337 aa27.2■■□□□ 1.94
SYMPK-212ENST00000598896 CCDC196A0A1B0GTZ2 297 aa27.19■■□□□ 1.94
SYMPK-212ENST00000598896 IFNAR1P17181 557 aa27.19■■□□□ 1.94
SYMPK-212ENST00000598896 TNNI2P48788 182 aa27.19■■□□□ 1.94
SYMPK-212ENST00000598896 HIRAP54198 1017 aaPredicted RBP27.19■■□□□ 1.94
SYMPK-212ENST00000598896 CPLX2Q6PUV4 134 aaKnown RBP27.19■■□□□ 1.94
SYMPK-212ENST00000598896 TEPSINQ96N21 525 aa27.19■■□□□ 1.94
SYMPK-212ENST00000598896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.19■■□□□ 1.94
SYMPK-212ENST00000598896 UBE2Q2LH0YL09 131 aa27.19■■□□□ 1.94
SYMPK-212ENST00000598896 TNFAIP1Q13829 316 aa27.19■■□□□ 1.94
SYMPK-212ENST00000598896 PPP2R5BQ15173 497 aa27.19■■□□□ 1.94
SYMPK-212ENST00000598896 NBPF11Q86T75 865 aa27.19■■□□□ 1.94
SYMPK-212ENST00000598896 GDF11O95390 407 aa27.18■■□□□ 1.94
SYMPK-212ENST00000598896 PLEKHA8P1O95397 391 aa27.18■■□□□ 1.94
SYMPK-212ENST00000598896 FOSBP53539 338 aa27.18■■□□□ 1.94
SYMPK-212ENST00000598896 JAG1P78504 1218 aa27.18■■□□□ 1.94
SYMPK-212ENST00000598896 RASGRP2Q7LDG7 609 aa27.18■■□□□ 1.94
SYMPK-212ENST00000598896 CCDC82Q8N4S0 544 aa27.18■■□□□ 1.94
SYMPK-212ENST00000598896 CHAMP1Q96JM3 812 aa27.18■■□□□ 1.94
SYMPK-212ENST00000598896 GRIN3BO60391 1043 aa27.17■■□□□ 1.94
SYMPK-212ENST00000598896 TOP1P11387 765 aaKnown RBP27.17■■□□□ 1.94
SYMPK-212ENST00000598896 ANGEL2Q5VTE6 544 aaKnown RBP27.17■■□□□ 1.94
SYMPK-212ENST00000598896 FUT2Q10981 343 aa27.17■■□□□ 1.94
SYMPK-212ENST00000598896 CLEC17AQ6ZS10 378 aa27.17■■□□□ 1.94
SYMPK-212ENST00000598896 MIGA2Q7L4E1 593 aa27.17■■□□□ 1.94
SYMPK-212ENST00000598896 CTCFLQ8NI51 663 aaPredicted RBP27.17■■□□□ 1.94
SYMPK-212ENST00000598896 SLC26A6Q9BXS9 759 aa27.17■■□□□ 1.94
SYMPK-212ENST00000598896 RBM28Q9NW13 759 aaKnown RBP27.17■■□□□ 1.94
SYMPK-212ENST00000598896 KIF3AQ9Y496 699 aa27.17■■□□□ 1.94
SYMPK-212ENST00000598896 FMNL1O95466 1100 aaPredicted RBP27.16■■□□□ 1.94
SYMPK-212ENST00000598896 F13A1P00488 732 aa27.16■■□□□ 1.94
SYMPK-212ENST00000598896 GUCY1A2P33402 732 aa27.16■■□□□ 1.94
SYMPK-212ENST00000598896 TMTC3Q6ZXV5 915 aa27.16■■□□□ 1.94
SYMPK-212ENST00000598896 AIFM3Q96NN9 605 aa27.16■■□□□ 1.94
SYMPK-212ENST00000598896 MYH4Q9Y623 1939 aa27.16■■□□□ 1.94
SYMPK-212ENST00000598896 STK36Q9NRP7 1315 aa27.16■■□□□ 1.94
SYMPK-212ENST00000598896 TBC1D12O60347 775 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 TTLL1O95922 423 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 DEFB129Q9H1M3 183 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 MTMR7Q9Y216 660 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 BAG4O95429 457 aaKnown RBP27.15■■□□□ 1.94
SYMPK-212ENST00000598896 PDIA4P13667 645 aaKnown RBP27.15■■□□□ 1.94
SYMPK-212ENST00000598896 GRM4Q14833 912 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 ABCB5Q2M3G0 1257 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 LRRC47Q8N1G4 583 aaKnown RBP27.15■■□□□ 1.94
SYMPK-212ENST00000598896 MAP3K14Q99558 947 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 GJB4Q9NTQ9 266 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 GGA3Q9NZ52 723 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 CLIP2Q9UDT6 1046 aa27.15■■□□□ 1.94
SYMPK-212ENST00000598896 LMOD1P29536 600 aaPredicted RBP27.14■■□□□ 1.94
SYMPK-212ENST00000598896 MAP3K10Q02779 954 aa27.14■■□□□ 1.94
SYMPK-212ENST00000598896 SSRP1Q08945 709 aaKnown RBP27.14■■□□□ 1.94
SYMPK-212ENST00000598896 SEPT2Q15019 361 aa27.14■■□□□ 1.94
SYMPK-212ENST00000598896 TMEM179Q6ZVK1 233 aa27.14■■□□□ 1.94
SYMPK-212ENST00000598896 STAG2Q8N3U4 1231 aa27.14■■□□□ 1.94
SYMPK-212ENST00000598896 GH2P01242 217 aa27.13■■□□□ 1.93
SYMPK-212ENST00000598896 NBR1Q14596 966 aa27.13■■□□□ 1.93
SYMPK-212ENST00000598896 SRBD1Q8N5C6 995 aaKnown RBP27.13■■□□□ 1.93
SYMPK-212ENST00000598896 MAD2L2Q9UI95 211 aa27.13■■□□□ 1.93
SYMPK-212ENST00000598896 H3BQV1 296 aa27.13■■□□□ 1.93
SYMPK-212ENST00000598896 GUCY1B3Q02153 619 aa27.13■■□□□ 1.93
SYMPK-212ENST00000598896 IFFO2Q5TF58 517 aa27.13■■□□□ 1.93
SYMPK-212ENST00000598896 FERMT3Q86UX7 667 aa27.13■■□□□ 1.93
SYMPK-212ENST00000598896 GBP4Q96PP9 640 aa27.13■■□□□ 1.93
SYMPK-212ENST00000598896 ADARB2Q9NS39 739 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms