RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 GTPBP3Q969Y2 492 aaKnown RBP12.95□□□□□ -0.34
SMG9-207ENST00000598860 STIM2Q9P246 746 aa12.95□□□□□ -0.34
SMG9-207ENST00000598860 LRFN2Q9ULH4 789 aa12.95□□□□□ -0.34
SMG9-207ENST00000598860 HDAC5Q9UQL6 1122 aa12.95□□□□□ -0.34
SMG9-207ENST00000598860 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 SRGNP10124 158 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 ZNF16P17020 682 aaPredicted RBP12.94□□□□□ -0.34
SMG9-207ENST00000598860 TRIM28Q13263 835 aaKnown RBP12.94□□□□□ -0.34
SMG9-207ENST00000598860 C1orf53Q5VUE5 145 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 ZNF34Q8IZ26 560 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 CCDC191Q8NCU4 936 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 GIPC2Q8TF65 315 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 MASTLQ96GX5 879 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 MYD88Q99836 296 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 TNNQ9UQP3 1299 aa12.94□□□□□ -0.34
SMG9-207ENST00000598860 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
SMG9-207ENST00000598860 EIF1AXP47813 144 aaKnown RBP12.93□□□□□ -0.34
SMG9-207ENST00000598860 LBRQ14739 615 aaKnown RBP12.93□□□□□ -0.34
SMG9-207ENST00000598860 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
SMG9-207ENST00000598860 C20orf194Q5TEA3 1177 aa12.93□□□□□ -0.34
SMG9-207ENST00000598860 PPP1R42Q7Z4L9 355 aa12.93□□□□□ -0.34
SMG9-207ENST00000598860 RGL4Q8IZJ4 473 aa12.93□□□□□ -0.34
SMG9-207ENST00000598860 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
SMG9-207ENST00000598860 KLRG2A4D1S0 409 aaPredicted RBP12.92□□□□□ -0.34
SMG9-207ENST00000598860 GPR25O00155 361 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 GNAI3P08754 354 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 NPR1P16066 1061 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 LCE2AQ5TA79 106 aaPredicted RBP12.92□□□□□ -0.34
SMG9-207ENST00000598860 SUSD4Q5VX71 490 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 C9orf131Q5VYM1 1079 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 DDX60Q8IY21 1712 aaKnown RBP12.92□□□□□ -0.34
SMG9-207ENST00000598860 C7orf43Q8WVR3 580 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 RBCK1Q9BYM8 510 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 CWC25Q9NXE8 425 aaPredicted RBP12.92□□□□□ -0.34
SMG9-207ENST00000598860 GJA3Q9Y6H8 435 aa12.92□□□□□ -0.34
SMG9-207ENST00000598860 NDUFB5O43674 189 aa12.91□□□□□ -0.34
SMG9-207ENST00000598860 IGKV5-2P06315 115 aa12.91□□□□□ -0.34
SMG9-207ENST00000598860 ALKBH2Q6NS38 261 aa12.91□□□□□ -0.34
SMG9-207ENST00000598860 ZNF526Q8TF50 670 aaPredicted RBP12.91□□□□□ -0.34
SMG9-207ENST00000598860 KLRG1Q96E93 195 aa12.91□□□□□ -0.34
SMG9-207ENST00000598860 DLEC1Q9Y238 1755 aa12.91□□□□□ -0.34
SMG9-207ENST00000598860 UBN2Q6ZU65 1347 aa12.9□□□□□ -0.34
SMG9-207ENST00000598860 GRM8O00222 908 aa12.9□□□□□ -0.34
SMG9-207ENST00000598860 UBAP2LQ14157 1087 aaKnown RBP12.9□□□□□ -0.34
SMG9-207ENST00000598860 GCKRQ14397 625 aa12.9□□□□□ -0.34
SMG9-207ENST00000598860 CWF19L2Q2TBE0 894 aaKnown RBP12.9□□□□□ -0.34
SMG9-207ENST00000598860 FOXR1Q6PIV2 292 aa12.9□□□□□ -0.34
SMG9-207ENST00000598860 NLRP8Q86W28 1048 aa12.9□□□□□ -0.34
SMG9-207ENST00000598860 UTP14AQ9BVJ6 771 aaKnown RBP12.9□□□□□ -0.34
SMG9-207ENST00000598860 NEUROD4Q9HD90 331 aa12.9□□□□□ -0.34
SMG9-207ENST00000598860 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.34
SMG9-207ENST00000598860 RNF181Q9P0P0 153 aa12.9□□□□□ -0.34
SMG9-207ENST00000598860 BRPF3Q9ULD4 1205 aa12.9□□□□□ -0.34
SMG9-207ENST00000598860 UTYO14607 1347 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 FZD6O60353 706 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
SMG9-207ENST00000598860 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
SMG9-207ENST00000598860 BRD2P25440 801 aaKnown RBP12.89□□□□□ -0.35
SMG9-207ENST00000598860 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 GMPRP36959 345 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 RTN1Q16799 776 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 FAM26DQ5JW98 314 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 SOGA3Q5TF21 947 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 PRPF40BQ6NWY9 871 aaKnown RBP12.89□□□□□ -0.35
SMG9-207ENST00000598860 LRRC69Q6ZNQ3 347 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 FBXO33Q7Z6M2 555 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
SMG9-207ENST00000598860 ZCCHC2Q9C0B9 1178 aaKnown RBP12.89□□□□□ -0.35
SMG9-207ENST00000598860 GPC6Q9Y625 555 aaPredicted RBP12.89□□□□□ -0.35
SMG9-207ENST00000598860 NTSR2O95665 410 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
SMG9-207ENST00000598860 LMNB1P20700 586 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
SMG9-207ENST00000598860 RASSF7Q02833 373 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 DGKZQ13574 1117 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 SLC10A5Q5PT55 438 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 TMC7Q7Z402 723 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
SMG9-207ENST00000598860 MRRFQ96E11 262 aaKnown RBP12.88□□□□□ -0.35
SMG9-207ENST00000598860 TRERF1Q96PN7 1200 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 USP44Q9H0E7 712 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
SMG9-207ENST00000598860 SBF1O95248 1867 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
SMG9-207ENST00000598860 NFKBIEO00221 500 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 ZBTB39O15060 712 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 COL19A1Q14993 1142 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 CRY2Q49AN0 593 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 FIGNL1Q6PIW4 674 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 ZBTB38Q8NAP3 1195 aaPredicted RBP12.87□□□□□ -0.35
SMG9-207ENST00000598860 EXOC6Q8TAG9 804 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 HSH2DQ96JZ2 352 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 MEIS3Q99687 375 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
SMG9-207ENST00000598860 ZBTB40Q9NUA8 1239 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms