RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 GPR153Q6NV75 609 aa20.67■□□□□ 0.9
PNKP-210ENST00000597965 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
PNKP-210ENST00000597965 MS4A1P11836 297 aa20.66■□□□□ 0.9
PNKP-210ENST00000597965 MORN1Q5T089 497 aa20.66■□□□□ 0.9
PNKP-210ENST00000597965 USP6NLQ92738 828 aa20.66■□□□□ 0.9
PNKP-210ENST00000597965 GDF15Q99988 308 aa20.66■□□□□ 0.9
PNKP-210ENST00000597965 TLR7Q9NYK1 1049 aaKnown RBP20.66■□□□□ 0.9
PNKP-210ENST00000597965 IVNS1ABPQ9Y6Y0 642 aa20.66■□□□□ 0.9
PNKP-210ENST00000597965 DDX60LQ5H9U9 1706 aaKnown RBP20.66■□□□□ 0.9
PNKP-210ENST00000597965 ALPK3Q96L96 1907 aa20.65■□□□□ 0.9
PNKP-210ENST00000597965 HNRNPUQ00839 825 aaKnown RBP eCLIP20.65■□□□□ 0.9
PNKP-210ENST00000597965 Q3C1V9 767 aa20.65■□□□□ 0.9
PNKP-210ENST00000597965 MFSD14CQ5VZR4 134 aa20.65■□□□□ 0.9
PNKP-210ENST00000597965 CEP85Q6P2H3 762 aa20.65■□□□□ 0.9
PNKP-210ENST00000597965 LBX2Q6XYB7 198 aa20.65■□□□□ 0.9
PNKP-210ENST00000597965 AACSQ86V21 672 aa20.65■□□□□ 0.9
PNKP-210ENST00000597965 EDC3Q96F86 508 aaKnown RBP20.65■□□□□ 0.9
PNKP-210ENST00000597965 PORCNQ9H237 461 aa20.65■□□□□ 0.9
PNKP-210ENST00000597965 MSCO60682 206 aa20.64■□□□□ 0.89
PNKP-210ENST00000597965 POLR3DP05423 398 aaPredicted RBP20.64■□□□□ 0.89
PNKP-210ENST00000597965 CACNB2Q08289 660 aaPredicted RBP20.64■□□□□ 0.89
PNKP-210ENST00000597965 MAP2K5Q13163 448 aa20.64■□□□□ 0.89
PNKP-210ENST00000597965 CATSPERGQ6ZRH7 1159 aa20.64■□□□□ 0.89
PNKP-210ENST00000597965 CRNKL1Q9BZJ0 848 aaKnown RBP20.64■□□□□ 0.89
PNKP-210ENST00000597965 MAGEB6P1A0A0J9YX57 407 aa20.63■□□□□ 0.89
PNKP-210ENST00000597965 SLC15A5A6NIM6 579 aa20.63■□□□□ 0.89
PNKP-210ENST00000597965 ZYXQ15942 572 aaKnown RBP20.63■□□□□ 0.89
PNKP-210ENST00000597965 SHROOM1Q2M3G4 852 aaPredicted RBP20.63■□□□□ 0.89
PNKP-210ENST00000597965 LAMA3Q16787 3333 aa20.62■□□□□ 0.89
PNKP-210ENST00000597965 RLBP1P12271 317 aa20.62■□□□□ 0.89
PNKP-210ENST00000597965 VCAM1P19320 739 aa20.62■□□□□ 0.89
PNKP-210ENST00000597965 MNX1P50219 401 aaPredicted RBP20.62■□□□□ 0.89
PNKP-210ENST00000597965 WDR78Q5VTH9 848 aa20.62■□□□□ 0.89
PNKP-210ENST00000597965 CLASRPQ8N2M8 674 aaKnown RBP20.62■□□□□ 0.89
PNKP-210ENST00000597965 ZMYND8Q9ULU4 1186 aaPredicted RBP20.62■□□□□ 0.89
PNKP-210ENST00000597965 EXOC6BQ9Y2D4 811 aa20.62■□□□□ 0.89
PNKP-210ENST00000597965 PEX10O60683 326 aa20.61■□□□□ 0.89
PNKP-210ENST00000597965 SLC9C2Q5TAH2 1124 aa20.61■□□□□ 0.89
PNKP-210ENST00000597965 ANTXR1Q9H6X2 564 aa20.61■□□□□ 0.89
PNKP-210ENST00000597965 HOXC10Q9NYD6 342 aa20.61■□□□□ 0.89
PNKP-210ENST00000597965 HMMRO75330 724 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 COL6A1P12109 1028 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 PTPREP23469 700 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 ATP2B2Q01814 1243 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 CCL14Q16627 93 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 LRIT3Q3SXY7 679 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 LHX8Q68G74 356 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 TDHQ8IZJ6 230 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.6■□□□□ 0.89
PNKP-210ENST00000597965 RIOK1Q9BRS2 568 aaKnown RBP20.6■□□□□ 0.89
PNKP-210ENST00000597965 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
PNKP-210ENST00000597965 MCM9Q9NXL9 1143 aa20.6■□□□□ 0.89
PNKP-210ENST00000597965 PFASO15067 1338 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 STRNO43815 780 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 HOXC6P09630 235 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 CCND3P30281 292 aaPredicted RBP20.59■□□□□ 0.89
PNKP-210ENST00000597965 SHMT1P34896 483 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 PLCD1P51178 756 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 COG2Q14746 738 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 RHPN1Q8TCX5 695 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 KIF1BPQ96EK5 621 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 CHMP4BQ9H444 224 aaKnown RBP20.59■□□□□ 0.89
PNKP-210ENST00000597965 SLC5A4Q9NY91 659 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 SWAP70Q9UH65 585 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 NDUFB9Q9Y6M9 179 aa20.59■□□□□ 0.89
PNKP-210ENST00000597965 CNMDO75829 334 aa20.58■□□□□ 0.89
PNKP-210ENST00000597965 IFIT2P09913 472 aaKnown RBP20.58■□□□□ 0.89
PNKP-210ENST00000597965 SYN1P17600 705 aa20.58■□□□□ 0.89
PNKP-210ENST00000597965 MAGEA10P43363 369 aaPredicted RBP20.58■□□□□ 0.89
PNKP-210ENST00000597965 GRB14Q14449 540 aa20.58■□□□□ 0.89
PNKP-210ENST00000597965 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.89
PNKP-210ENST00000597965 AMOTL1Q8IY63 956 aa20.58■□□□□ 0.89
PNKP-210ENST00000597965 MB21D1Q8N884 522 aa20.58■□□□□ 0.89
PNKP-210ENST00000597965 UBE2OQ9C0C9 1292 aaKnown RBP20.58■□□□□ 0.89
PNKP-210ENST00000597965 SH2D4AQ9H788 454 aa20.58■□□□□ 0.89
PNKP-210ENST00000597965 SPDYE16A6NNV3 312 aaPredicted RBP20.57■□□□□ 0.88
PNKP-210ENST00000597965 MPHOSPH10O00566 681 aaKnown RBP20.57■□□□□ 0.88
PNKP-210ENST00000597965 SOX1O00570 391 aaPredicted RBP20.57■□□□□ 0.88
PNKP-210ENST00000597965 PDE6AP16499 860 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 GABPAQ06546 454 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 POTEEQ6S8J3 1075 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 TMEM179Q6ZVK1 233 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 SLC17A8Q8NDX2 589 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 NAV1Q8NEY1 1877 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 ACER1Q8TDN7 264 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 LPAR1Q92633 364 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 LRCH3Q96II8 777 aa20.57■□□□□ 0.88
PNKP-210ENST00000597965 DPP9Q86TI2 863 aa20.56■□□□□ 0.88
PNKP-210ENST00000597965 DDRGK1Q96HY6 314 aa20.56■□□□□ 0.88
PNKP-210ENST00000597965 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.56■□□□□ 0.88
PNKP-210ENST00000597965 IL1RAPL2Q9NP60 686 aa20.56■□□□□ 0.88
PNKP-210ENST00000597965 DDX20Q9UHI6 824 aaKnown RBP20.56■□□□□ 0.88
PNKP-210ENST00000597965 ZNF532Q9HCE3 1301 aa20.55■□□□□ 0.88
PNKP-210ENST00000597965 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
PNKP-210ENST00000597965 CNGA1P29973 690 aa20.55■□□□□ 0.88
PNKP-210ENST00000597965 SEPT2Q15019 361 aa20.55■□□□□ 0.88
PNKP-210ENST00000597965 SHCBP1Q8NEM2 672 aa20.55■□□□□ 0.88
PNKP-210ENST00000597965 TANGO6Q9C0B7 1094 aa20.55■□□□□ 0.88
PNKP-210ENST00000597965 ARHGEF10LQ9HCE6 1279 aa20.55■□□□□ 0.88
PNKP-210ENST00000597965 BTBD7Q9P203 1132 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms