RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 USP17L10C9JJH3 530 aa21.56■■□□□ 1.04
IRF3-216ENST00000597180 PDHXO00330 501 aa21.56■■□□□ 1.04
IRF3-216ENST00000597180 HMGCS2P54868 508 aa21.56■■□□□ 1.04
IRF3-216ENST00000597180 RUFY2Q8WXA3 655 aa21.56■■□□□ 1.04
IRF3-216ENST00000597180 MKNK2Q9HBH9 465 aa21.56■■□□□ 1.04
IRF3-216ENST00000597180 ZFYVE28Q9HCC9 887 aa21.56■■□□□ 1.04
IRF3-216ENST00000597180 AGTPBP1Q9UPW5 1226 aa21.56■■□□□ 1.04
IRF3-216ENST00000597180 GPR25O00155 361 aa21.55■■□□□ 1.04
IRF3-216ENST00000597180 PDE4BQ07343 736 aa21.55■■□□□ 1.04
IRF3-216ENST00000597180 STK11IPQ8N1F8 1099 aa21.55■■□□□ 1.04
IRF3-216ENST00000597180 DSCC1Q9BVC3 393 aa21.55■■□□□ 1.04
IRF3-216ENST00000597180 TREML2Q5T2D2 321 aa21.54■■□□□ 1.04
IRF3-216ENST00000597180 ACER1Q8TDN7 264 aa21.54■■□□□ 1.04
IRF3-216ENST00000597180 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.54■■□□□ 1.04
IRF3-216ENST00000597180 KIAA1683Q9H0B3 1180 aa21.54■■□□□ 1.04
IRF3-216ENST00000597180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.54■■□□□ 1.04
IRF3-216ENST00000597180 ADGRA2Q96PE1 1338 aa21.54■■□□□ 1.04
IRF3-216ENST00000597180 PLIN4Q96Q06 1357 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 FGRP09769 529 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 CTDSPL2Q05D32 466 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 DGKZQ13574 1117 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 USP17L2Q6R6M4 530 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 C12orf42Q96LP6 360 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 KANSL2Q9H9L4 492 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 EMILIN3Q9NT22 766 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 TMOD4Q9NZQ9 345 aa21.53■■□□□ 1.04
IRF3-216ENST00000597180 SGSM2O43147 1006 aa21.52■■□□□ 1.04
IRF3-216ENST00000597180 TLR2O60603 784 aa21.52■■□□□ 1.04
IRF3-216ENST00000597180 PRDM1O75626 825 aa21.52■■□□□ 1.04
IRF3-216ENST00000597180 USP14P54578 494 aa21.52■■□□□ 1.04
IRF3-216ENST00000597180 ICA1Q05084 483 aa21.52■■□□□ 1.04
IRF3-216ENST00000597180 SIAH1Q8IUQ4 282 aa21.52■■□□□ 1.04
IRF3-216ENST00000597180 ZNF444Q8N0Y2 327 aaPredicted RBP21.52■■□□□ 1.04
IRF3-216ENST00000597180 ZNF296Q8WUU4 475 aaPredicted RBP21.52■■□□□ 1.04
IRF3-216ENST00000597180 PARK7Q99497 189 aaKnown RBP21.52■■□□□ 1.04
IRF3-216ENST00000597180 FEZ1Q99689 392 aa21.52■■□□□ 1.04
IRF3-216ENST00000597180 A0A1W2PRG0 241 aa21.51■■□□□ 1.03
IRF3-216ENST00000597180 COL13A1Q5TAT6 717 aaPredicted RBP21.51■■□□□ 1.03
IRF3-216ENST00000597180 CLEC10AQ8IUN9 316 aa21.51■■□□□ 1.03
IRF3-216ENST00000597180 TACC3Q9Y6A5 838 aa21.51■■□□□ 1.03
IRF3-216ENST00000597180 PARP14Q460N5 1801 aa21.5■■□□□ 1.03
IRF3-216ENST00000597180 MGAMO43451 1857 aa21.5■■□□□ 1.03
IRF3-216ENST00000597180 IGKV6D-41A0A0C4DH26 115 aa21.5■■□□□ 1.03
IRF3-216ENST00000597180 ORC4O43929 436 aa21.5■■□□□ 1.03
IRF3-216ENST00000597180 FKTNO75072 461 aa21.5■■□□□ 1.03
IRF3-216ENST00000597180 HOXA7P31268 230 aaPredicted RBP21.5■■□□□ 1.03
IRF3-216ENST00000597180 PABPC4Q13310 644 aaKnown RBP eCLIP21.5■■□□□ 1.03
IRF3-216ENST00000597180 NBPF3Q9H094 633 aa21.5■■□□□ 1.03
IRF3-216ENST00000597180 ARHGEF10LQ9HCE6 1279 aa21.5■■□□□ 1.03
IRF3-216ENST00000597180 PNMA3Q9UL41 463 aa21.5■■□□□ 1.03
IRF3-216ENST00000597180 CYP2C8P10632 490 aa21.49■■□□□ 1.03
IRF3-216ENST00000597180 PCP11498 1178 aaKnown RBP21.49■■□□□ 1.03
IRF3-216ENST00000597180 EEF2P13639 858 aaKnown RBP21.49■■□□□ 1.03
IRF3-216ENST00000597180 C17orf99Q6UX52 265 aa21.49■■□□□ 1.03
IRF3-216ENST00000597180 NEDD1Q8NHV4 660 aa21.49■■□□□ 1.03
IRF3-216ENST00000597180 SH2D4AQ9H788 454 aa21.49■■□□□ 1.03
IRF3-216ENST00000597180 CTNNA3Q9UI47 895 aa21.49■■□□□ 1.03
IRF3-216ENST00000597180 TMX2Q9Y320 296 aa21.49■■□□□ 1.03
IRF3-216ENST00000597180 RLFQ13129 1914 aa21.49■■□□□ 1.03
IRF3-216ENST00000597180 HAND2P61296 217 aa21.48■■□□□ 1.03
IRF3-216ENST00000597180 ZYXQ15942 572 aaKnown RBP21.48■■□□□ 1.03
IRF3-216ENST00000597180 STAG1Q8WVM7 1258 aa21.48■■□□□ 1.03
IRF3-216ENST00000597180 INCENPQ9NQS7 918 aa21.48■■□□□ 1.03
IRF3-216ENST00000597180 ZSWIM8A7E2V4 1837 aa21.48■■□□□ 1.03
IRF3-216ENST00000597180 ZNF213O14771 459 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 TSPY3P0CV98 308 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 TSPY8P0CW00 308 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 OSBPP22059 807 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 TFAP4Q01664 338 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 SP3Q02447 781 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 FAM47AQ5JRC9 791 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 AKNAD1Q5T1N1 836 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 TBC1D10CQ8IV04 446 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 ESYT1Q9BSJ8 1104 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 ASCC2Q9H1I8 757 aaPredicted RBP21.47■■□□□ 1.03
IRF3-216ENST00000597180 NYAP2Q9P242 653 aa21.47■■□□□ 1.03
IRF3-216ENST00000597180 BCRP11274 1271 aa21.46■■□□□ 1.03
IRF3-216ENST00000597180 VCAM1P19320 739 aa21.46■■□□□ 1.03
IRF3-216ENST00000597180 PTH1RQ03431 593 aa21.46■■□□□ 1.03
IRF3-216ENST00000597180 IMMTQ16891 758 aaKnown RBP21.46■■□□□ 1.03
IRF3-216ENST00000597180 LPAR1Q92633 364 aa21.46■■□□□ 1.03
IRF3-216ENST00000597180 CEP95Q96GE4 821 aa21.46■■□□□ 1.03
IRF3-216ENST00000597180 RNF41Q9H4P4 317 aaPredicted RBP21.46■■□□□ 1.03
IRF3-216ENST00000597180 VCPKMTQ9H867 229 aa21.46■■□□□ 1.03
IRF3-216ENST00000597180 MTMR4Q9NYA4 1195 aa21.46■■□□□ 1.03
IRF3-216ENST00000597180 CPA4Q9UI42 421 aa21.46■■□□□ 1.03
IRF3-216ENST00000597180 CDC45O75419 566 aa21.45■■□□□ 1.02
IRF3-216ENST00000597180 KIAA1755Q5JYT7 1200 aa21.45■■□□□ 1.02
IRF3-216ENST00000597180 MFSD6Q6ZSS7 791 aa21.45■■□□□ 1.02
IRF3-216ENST00000597180 SMCR8Q8TEV9 937 aaPredicted RBP21.45■■□□□ 1.02
IRF3-216ENST00000597180 ERO1AQ96HE7 468 aa21.45■■□□□ 1.02
IRF3-216ENST00000597180 TSPY2A6NKD2 308 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L15C9J2P7 530 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L13C9JLJ4 530 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L11C9JVI0 530 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L18D6R9N7 530 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L22D6RA61 530 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L17D6RBQ6 530 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L19D6RCP7 530 aa21.44■■□□□ 1.02
IRF3-216ENST00000597180 USP17L20D6RJB6 530 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms