RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 TMEM67Q5HYA8 995 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 CHADLQ6NUI6 762 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 ENAHQ8N8S7 591 aaPredicted RBP10.29□□□□□ -0.76
SNRPA-202ENST00000596860 CDCA5Q96FF9 252 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNRPA-202ENST00000596860 SH2D4AQ9H788 454 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 LY9Q9HBG7 655 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 IL17RBQ9NRM6 502 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 MTMR4Q9NYA4 1195 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 ZBTB21Q9ULJ3 1066 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 CLEC11AQ9Y240 323 aa10.29□□□□□ -0.76
SNRPA-202ENST00000596860 CCDC196A0A1B0GTZ2 297 aa10.28□□□□□ -0.76
SNRPA-202ENST00000596860 K7ELQ4 463 aaPredicted RBP10.28□□□□□ -0.76
SNRPA-202ENST00000596860 MAP3K9P80192 1104 aa10.28□□□□□ -0.76
SNRPA-202ENST00000596860 IFIT1BQ5T764 474 aaKnown RBP10.28□□□□□ -0.76
SNRPA-202ENST00000596860 RCSD1Q6JBY9 416 aa10.28□□□□□ -0.76
SNRPA-202ENST00000596860 SYNE3Q6ZMZ3 975 aa10.28□□□□□ -0.76
SNRPA-202ENST00000596860 ARMC9Q7Z3E5 817 aa10.28□□□□□ -0.76
SNRPA-202ENST00000596860 SCYL3Q8IZE3 742 aa10.28□□□□□ -0.76
SNRPA-202ENST00000596860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.28□□□□□ -0.761e-35■■□□□ 13.5
SNRPA-202ENST00000596860 INTS4Q96HW7 963 aaKnown RBP10.28□□□□□ -0.76
SNRPA-202ENST00000596860 WDR18Q9BV38 432 aa10.28□□□□□ -0.76
SNRPA-202ENST00000596860 INCENPQ9NQS7 918 aa10.28□□□□□ -0.76
SNRPA-202ENST00000596860 CCDC69A6NI79 296 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 ADM5C9JUS6 153 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 DHX16O60231 1041 aaKnown RBP10.27□□□□□ -0.77
SNRPA-202ENST00000596860 PFKFB2O60825 505 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 USP2O75604 605 aaPredicted RBP10.27□□□□□ -0.77
SNRPA-202ENST00000596860 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.77
SNRPA-202ENST00000596860 PDIA4P13667 645 aaKnown RBP10.27□□□□□ -0.77
SNRPA-202ENST00000596860 SMARCA1P28370 1054 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 GUCY1A2P33402 732 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 ICA1Q05084 483 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 CUL4AQ13619 759 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 SLC4A8Q2Y0W8 1093 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 FAM47AQ5JRC9 791 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 APOA5Q6Q788 366 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 CATIPQ7Z7H3 387 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 CDAN1Q8IWY9 1227 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 ANKRD13AQ8IZ07 590 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 RGS22Q8NE09 1264 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 GMCL1P1Q8NEA9 526 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 BRF1Q92994 677 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 CEP95Q96GE4 821 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 GLIS2Q9BZE0 524 aaPredicted RBP10.27□□□□□ -0.77
SNRPA-202ENST00000596860 AS3MTQ9HBK9 375 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 ARHGEF10LQ9HCE6 1279 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 RBM28Q9NW13 759 aaKnown RBP10.27□□□□□ -0.77
SNRPA-202ENST00000596860 SLC12A7Q9Y666 1083 aa10.27□□□□□ -0.77
SNRPA-202ENST00000596860 USP17L5A8MUK1 530 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 ZBTB43O43298 467 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 GH2P01242 217 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 SNHG28P0DPA3 235 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 CPA1P15085 419 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 GNAQP50148 359 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 USP14P54578 494 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 TROAPQ12815 778 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 LDLRAD1Q5T700 205 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 MIGA2Q7L4E1 593 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 NKX2-3Q8TAU0 364 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 GTF3C6Q969F1 213 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 TMX3Q96JJ7 454 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 WRNIP1Q96S55 665 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 TMEM47Q9BQJ4 181 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 LZTS2Q9BRK4 669 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 LLPHQ9BRT6 129 aaKnown RBP10.26□□□□□ -0.77
SNRPA-202ENST00000596860 KAT14Q9H8E8 782 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 PICK1Q9NRD5 415 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 TPCN1Q9ULQ1 816 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 TMX2Q9Y320 296 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 CSADQ9Y600 493 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 PTPRFP10586 1907 aa10.26□□□□□ -0.77
SNRPA-202ENST00000596860 KLF18A0A0U1RQI7 1052 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 MPHOSPH10O00566 681 aaKnown RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 PLA2G6O60733 806 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 CDKL5O76039 1030 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 POTEJP0CG39 1038 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 PDIA3P30101 505 aaKnown RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 KIF5BP33176 963 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 PPATQ06203 517 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 COL9A3Q14050 684 aaPredicted RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 RRP1BQ14684 758 aaKnown RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 SEPT2Q15019 361 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 MAP1SQ66K74 1059 aaPredicted RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 CPLX2Q6PUV4 134 aaKnown RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 NFXL1Q6ZNB6 911 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 CHST3Q7LGC8 479 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 FAM177A1Q8N128 213 aaPredicted RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 STK11IPQ8N1F8 1099 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 DCAF4Q8WV16 495 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 LPAR1Q92633 364 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 GMCL1Q96IK5 515 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 TCEANC2Q96MN5 208 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 KIAA1683Q9H0B3 1180 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 SLKQ9H2G2 1235 aaPredicted RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 RBM27Q9P2N5 1060 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms