RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 CHMP4CQ96CF2 233 aa18.33■□□□□ 0.52
SMCO4-206ENST00000596676 CEP95Q96GE4 821 aa18.33■□□□□ 0.52
SMCO4-206ENST00000596676 HHIPL1Q96JK4 782 aa18.33■□□□□ 0.52
SMCO4-206ENST00000596676 ZNF287Q9HBT7 754 aa18.33■□□□□ 0.52
SMCO4-206ENST00000596676 GPHNQ9NQX3 736 aaPredicted RBP18.33■□□□□ 0.52
SMCO4-206ENST00000596676 TAOK2Q9UL54 1235 aa18.33■□□□□ 0.52
SMCO4-206ENST00000596676 UNCXA6NJT0 531 aa18.32■□□□□ 0.52
SMCO4-206ENST00000596676 EEF2P13639 858 aaKnown RBP18.32■□□□□ 0.52
SMCO4-206ENST00000596676 PPATQ06203 517 aa18.32■□□□□ 0.52
SMCO4-206ENST00000596676 TSGA10IPQ3SY00 556 aa18.32■□□□□ 0.52
SMCO4-206ENST00000596676 RNF20Q5VTR2 975 aa18.32■□□□□ 0.52
SMCO4-206ENST00000596676 MB21D2Q8IYB1 491 aaPredicted RBP18.32■□□□□ 0.52
SMCO4-206ENST00000596676 ESR2Q92731 530 aa18.32■□□□□ 0.52
SMCO4-206ENST00000596676 TCEANC2Q96MN5 208 aa18.32■□□□□ 0.52
SMCO4-206ENST00000596676 KRT23Q9C075 422 aa18.32■□□□□ 0.52
SMCO4-206ENST00000596676 ICA1Q05084 483 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 PPIL2Q13356 520 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 KIAA1755Q5JYT7 1200 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 ZNF280CQ8ND82 737 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 NCOA7Q8NI08 942 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 WDR18Q9BV38 432 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 LRRC2Q9BYS8 371 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 CNNM2Q9H8M5 875 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 SENP2Q9HC62 589 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 MTMR4Q9NYA4 1195 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 CLIP2Q9UDT6 1046 aa18.31■□□□□ 0.52
SMCO4-206ENST00000596676 WDR33Q9C0J8 1336 aaKnown RBP18.3■□□□□ 0.52
SMCO4-206ENST00000596676 EPB41L2O43491 1005 aaKnown RBP18.3■□□□□ 0.52
SMCO4-206ENST00000596676 PCP11498 1178 aaKnown RBP18.3■□□□□ 0.52
SMCO4-206ENST00000596676 ZKSCAN1P17029 563 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-206ENST00000596676 KIF23Q02241 960 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-206ENST00000596676 TRDNQ13061 729 aa18.3■□□□□ 0.52
SMCO4-206ENST00000596676 MTMR2Q13614 643 aa18.3■□□□□ 0.52
SMCO4-206ENST00000596676 RALYLQ86SE5 291 aaKnown RBP18.3■□□□□ 0.52
SMCO4-206ENST00000596676 CCDC102AQ96A19 550 aa18.3■□□□□ 0.52
SMCO4-206ENST00000596676 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
SMCO4-206ENST00000596676 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
SMCO4-206ENST00000596676 GINM1Q9NU53 330 aa18.3■□□□□ 0.52
SMCO4-206ENST00000596676 PLIN4Q96Q06 1357 aa18.3■□□□□ 0.52
SMCO4-206ENST00000596676 MOGSQ13724 837 aa18.29■□□□□ 0.52
SMCO4-206ENST00000596676 RCSD1Q6JBY9 416 aa18.29■□□□□ 0.52
SMCO4-206ENST00000596676 RASGRP2Q7LDG7 609 aa18.29■□□□□ 0.52
SMCO4-206ENST00000596676 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
SMCO4-206ENST00000596676 DNAJC5GQ8N7S2 189 aa18.29■□□□□ 0.52
SMCO4-206ENST00000596676 NEK1Q96PY6 1258 aa18.29■□□□□ 0.52
SMCO4-206ENST00000596676 KANSL2Q9H9L4 492 aa18.29■□□□□ 0.52
SMCO4-206ENST00000596676 EMILIN3Q9NT22 766 aa18.29■□□□□ 0.52
SMCO4-206ENST00000596676 KCNH4Q9UQ05 1017 aa18.29■□□□□ 0.52
SMCO4-206ENST00000596676 PTPRFP10586 1907 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 PRC1O43663 620 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 MCCP23508 829 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 HMGCS2P54868 508 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 BRI3BPQ8WY22 251 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 PTPN18Q99952 460 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 AS3MTQ9HBK9 375 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 NYAP2Q9P242 653 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 STX8Q9UNK0 236 aa18.28■□□□□ 0.52
SMCO4-206ENST00000596676 MYH4Q9Y623 1939 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 TNKSO95271 1327 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 USP17L10C9JJH3 530 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 CXCL11O14625 94 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 ZBTB48P10074 688 aaPredicted RBP18.27■□□□□ 0.52
SMCO4-206ENST00000596676 BACE1P56817 501 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 EXOSC10Q01780 885 aaKnown RBP18.27■□□□□ 0.52
SMCO4-206ENST00000596676 SEC23AQ15436 765 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 GADL1Q6ZQY3 521 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 ENAHQ8N8S7 591 aaPredicted RBP18.27■□□□□ 0.52
SMCO4-206ENST00000596676 ZSCAN10Q96SZ4 725 aaPredicted RBP18.27■□□□□ 0.52
SMCO4-206ENST00000596676 FEZ1Q99689 392 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 C22orf23Q9BZE7 217 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 UPF3BQ9BZI7 483 aaKnown RBP18.27■□□□□ 0.52
SMCO4-206ENST00000596676 TCP11L1Q9NUJ3 509 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 MTMR7Q9Y216 660 aa18.27■□□□□ 0.52
SMCO4-206ENST00000596676 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 A0A0G2JLL6 359 aaPredicted RBP18.26■□□□□ 0.51
SMCO4-206ENST00000596676 IFIT3O14879 490 aaKnown RBP18.26■□□□□ 0.51
SMCO4-206ENST00000596676 TTLL1O95922 423 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
SMCO4-206ENST00000596676 NOVP48745 357 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 SNAPC2Q13487 334 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 KRT32Q14532 448 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 CCL15Q16663 113 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 PRRT2Q7Z6L0 340 aaPredicted RBP18.26■□□□□ 0.51
SMCO4-206ENST00000596676 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 TMEM47Q9BQJ4 181 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 ARHGEF10LQ9HCE6 1279 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 TMX2Q9Y320 296 aa18.26■□□□□ 0.51
SMCO4-206ENST00000596676 RAD21O60216 631 aa18.25■□□□□ 0.51
SMCO4-206ENST00000596676 MCM5P33992 734 aa18.25■□□□□ 0.51
SMCO4-206ENST00000596676 TREML2Q5T2D2 321 aa18.25■□□□□ 0.51
SMCO4-206ENST00000596676 GPAT2Q6NUI2 795 aa18.25■□□□□ 0.51
SMCO4-206ENST00000596676 MKL1Q969V6 931 aa18.25■□□□□ 0.51
SMCO4-206ENST00000596676 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
SMCO4-206ENST00000596676 KIF2CQ99661 725 aa18.25■□□□□ 0.51
SMCO4-206ENST00000596676 UBAC1Q9BSL1 405 aa18.25■□□□□ 0.51
SMCO4-206ENST00000596676 KIAA1683Q9H0B3 1180 aa18.25■□□□□ 0.51
SMCO4-206ENST00000596676 BTBD19C9JJ37 291 aa18.24■□□□□ 0.51
SMCO4-206ENST00000596676 IGF2BP3O00425 579 aaKnown RBP eCLIP18.24■□□□□ 0.51
SMCO4-206ENST00000596676 GTF2A2P52657 109 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms