RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 PCDHA7Q9UN72 937 aa16.83■□□□□ 0.28
PAF1-204ENST00000595564 V9GY48 417 aaPredicted RBP16.83■□□□□ 0.28
PAF1-204ENST00000595564 FOCADQ5VW36 1801 aa16.83■□□□□ 0.28
PAF1-204ENST00000595564 SNED1Q8TER0 1413 aa16.83■□□□□ 0.28
PAF1-204ENST00000595564 hCG_1642624A0A1W2PR95 340 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 BTBD18B2RXH4 712 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 SPTLC2O15270 562 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 XBP1P17861 261 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 KIF5BP33176 963 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 PKN1Q16512 942 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 APOBEC3HQ6NTF7 200 aaKnown RBP16.82■□□□□ 0.28
PAF1-204ENST00000595564 CDC42EP5Q6NZY7 148 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 DIS3L2Q8IYB7 885 aaKnown RBP16.82■□□□□ 0.28
PAF1-204ENST00000595564 SRBD1Q8N5C6 995 aaKnown RBP16.82■□□□□ 0.28
PAF1-204ENST00000595564 RNF214Q8ND24 703 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 TNMDQ9H2S6 317 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 ADAMTSL1Q8N6G6 1762 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 CNTNAP5Q8WYK1 1306 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 NOSTRINQ8IVI9 506 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
PAF1-204ENST00000595564 CLSTN2Q9H4D0 955 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 STX8Q9UNK0 236 aa16.82■□□□□ 0.28
PAF1-204ENST00000595564 PPIP5K2O43314 1243 aa16.81■□□□□ 0.28
PAF1-204ENST00000595564 DPEP1P16444 411 aa16.81■□□□□ 0.28
PAF1-204ENST00000595564 CCDC73Q6ZRK6 1079 aa16.81■□□□□ 0.28
PAF1-204ENST00000595564 NEDD1Q8NHV4 660 aa16.81■□□□□ 0.28
PAF1-204ENST00000595564 ZDHHC15Q96MV8 337 aa16.81■□□□□ 0.28
PAF1-204ENST00000595564 FOXP1Q9H334 677 aaPredicted RBP16.81■□□□□ 0.28
PAF1-204ENST00000595564 GOLPH3LQ9H4A5 285 aa16.81■□□□□ 0.28
PAF1-204ENST00000595564 VPS54Q9P1Q0 977 aa16.81■□□□□ 0.28
PAF1-204ENST00000595564 CCDC93Q567U6 631 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 ADALQ6DHV7 355 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 FSIP1Q8NA03 581 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 MRIQ9BWK5 157 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 OSBPL5Q9H0X9 879 aaPredicted RBP16.8■□□□□ 0.28
PAF1-204ENST00000595564 SCN9AQ15858 1988 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 MYH6P13533 1939 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
PAF1-204ENST00000595564 GRM4Q14833 912 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 GRIPAP1Q4V328 841 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 MRPS27Q92552 414 aaKnown RBP16.8■□□□□ 0.28
PAF1-204ENST00000595564 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
PAF1-204ENST00000595564 A0A1W2PQ27 194 aa16.79■□□□□ 0.28
PAF1-204ENST00000595564 A0A1W2PQ64 194 aa16.79■□□□□ 0.28
PAF1-204ENST00000595564 A0A1W2PQD8 194 aa16.79■□□□□ 0.28
PAF1-204ENST00000595564 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
PAF1-204ENST00000595564 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
PAF1-204ENST00000595564 RTKN2Q8IZC4 609 aa16.79■□□□□ 0.28
PAF1-204ENST00000595564 OXER1Q8TDS5 423 aa16.79■□□□□ 0.28
PAF1-204ENST00000595564 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
PAF1-204ENST00000595564 PCDHAC2Q9Y5I4 1007 aa16.79■□□□□ 0.28
PAF1-204ENST00000595564 KCNA3P22001 575 aa16.78■□□□□ 0.28
PAF1-204ENST00000595564 FAM160A1Q05DH4 1040 aa16.78■□□□□ 0.28
PAF1-204ENST00000595564 GABPAQ06546 454 aa16.78■□□□□ 0.28
PAF1-204ENST00000595564 NFIAQ12857 509 aa16.78■□□□□ 0.28
PAF1-204ENST00000595564 NR5A1Q13285 461 aa16.78■□□□□ 0.28
PAF1-204ENST00000595564 CKAP2LQ8IYA6 745 aa16.78■□□□□ 0.28
PAF1-204ENST00000595564 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
PAF1-204ENST00000595564 PHF20Q9BVI0 1012 aa16.78■□□□□ 0.28
PAF1-204ENST00000595564 YDJCA8MPS7 323 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 HLA-DOAP06340 250 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 CCDC192P0DO97 292 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 MARCKSP29966 332 aaPredicted RBP16.77■□□□□ 0.28
PAF1-204ENST00000595564 KRT2P35908 639 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 GNAQP50148 359 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
PAF1-204ENST00000595564 PTPAQ15257 358 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 STAG2Q8N3U4 1231 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 CEP95Q96GE4 821 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 MAD2L2Q9UI95 211 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 SERPINB13Q9UIV8 391 aa16.77■□□□□ 0.28
PAF1-204ENST00000595564 ZNF646O15015 1829 aaPredicted RBP16.77■□□□□ 0.28
PAF1-204ENST00000595564 ZBTB7AO95365 584 aa16.77■□□□□ 0.27
PAF1-204ENST00000595564 SCG2P13521 617 aa16.77■□□□□ 0.27
PAF1-204ENST00000595564 CCDC173Q0VFZ6 552 aa16.77■□□□□ 0.27
PAF1-204ENST00000595564 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.27
PAF1-204ENST00000595564 JMYQ8N9B5 988 aa16.77■□□□□ 0.27
PAF1-204ENST00000595564 ENGASEQ8NFI3 743 aa16.77■□□□□ 0.27
PAF1-204ENST00000595564 PSMD1Q99460 953 aa16.77■□□□□ 0.27
PAF1-204ENST00000595564 SWAP70Q9UH65 585 aa16.77■□□□□ 0.27
PAF1-204ENST00000595564 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.27
PAF1-204ENST00000595564 A0A1B0GVL5 298 aa16.76■□□□□ 0.27
PAF1-204ENST00000595564 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
PAF1-204ENST00000595564 PPP6R2O75170 966 aa16.76■□□□□ 0.27
PAF1-204ENST00000595564 CACNB3P54284 484 aa16.76■□□□□ 0.27
PAF1-204ENST00000595564 PFKFB3Q16875 520 aaPredicted RBP16.76■□□□□ 0.27
PAF1-204ENST00000595564 RILPL1Q5EBL4 403 aa16.76■□□□□ 0.27
PAF1-204ENST00000595564 BRMS1Q9HCU9 246 aa16.76■□□□□ 0.27
PAF1-204ENST00000595564 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
PAF1-204ENST00000595564 AKR1B1P15121 316 aa16.75■□□□□ 0.27
PAF1-204ENST00000595564 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
PAF1-204ENST00000595564 TYRO3Q06418 890 aa16.75■□□□□ 0.27
PAF1-204ENST00000595564 AXDND1Q5T1B0 1012 aaPredicted RBP16.75■□□□□ 0.27
PAF1-204ENST00000595564 ZFPM1Q8IX07 1006 aa16.75■□□□□ 0.27
PAF1-204ENST00000595564 CABP5Q9NP86 173 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms