RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 MYPNQ86TC9 1320 aa21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 GPAA1O43292 621 aa21.25■□□□□ 0.99
SHKBP1-204ENST00000594862 CYP2D6P10635 497 aa21.25■□□□□ 0.99
SHKBP1-204ENST00000594862 PDE1AP54750 535 aa21.25■□□□□ 0.99
SHKBP1-204ENST00000594862 SHROOM1Q2M3G4 852 aaPredicted RBP21.25■□□□□ 0.99
SHKBP1-204ENST00000594862 SBK1Q52WX2 424 aa21.25■□□□□ 0.99
SHKBP1-204ENST00000594862 ANKRD13CQ8N6S4 541 aa21.25■□□□□ 0.99
SHKBP1-204ENST00000594862 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
SHKBP1-204ENST00000594862 NACAP1Q9BZK3 213 aa21.25■□□□□ 0.99
SHKBP1-204ENST00000594862 TNPO2O14787 897 aaKnown RBP21.24■□□□□ 0.99
SHKBP1-204ENST00000594862 CHGBP05060 677 aa21.24■□□□□ 0.99
SHKBP1-204ENST00000594862 CTR9Q6PD62 1173 aa21.24■□□□□ 0.99
SHKBP1-204ENST00000594862 RAET1EQ8TD07 263 aa21.24■□□□□ 0.99
SHKBP1-204ENST00000594862 COA7Q96BR5 231 aa21.24■□□□□ 0.99
SHKBP1-204ENST00000594862 ZNF287Q9HBT7 754 aa21.24■□□□□ 0.99
SHKBP1-204ENST00000594862 PCDH10Q9P2E7 1040 aa21.24■□□□□ 0.99
SHKBP1-204ENST00000594862 MORF4L1Q9UBU8 362 aa21.24■□□□□ 0.99
SHKBP1-204ENST00000594862 ROBO3Q96MS0 1386 aa21.23■□□□□ 0.99
SHKBP1-204ENST00000594862 CDK8P49336 464 aa21.23■□□□□ 0.99
SHKBP1-204ENST00000594862 SEPT2Q15019 361 aa21.23■□□□□ 0.99
SHKBP1-204ENST00000594862 ZNF333Q96JL9 665 aa21.23■□□□□ 0.99
SHKBP1-204ENST00000594862 ARHGEF10LQ9HCE6 1279 aa21.23■□□□□ 0.99
SHKBP1-204ENST00000594862 EMILIN3Q9NT22 766 aa21.23■□□□□ 0.99
SHKBP1-204ENST00000594862 GSG1L2A8MUP6 293 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L15C9J2P7 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L13C9JLJ4 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L11C9JVI0 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L18D6R9N7 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L22D6RA61 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L17D6RBQ6 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L19D6RCP7 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L20D6RJB6 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 CTGFP29279 349 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 TDO2P48775 406 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 HERVK_113P62684 666 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L24Q0WX57 530 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 ZMYM1Q5SVZ6 1142 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 CHD1LQ86WJ1 897 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 SLC44A5Q8NCS7 719 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 DYNLL2Q96FJ2 89 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 TMEM106CQ9BVX2 250 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 LNPKQ9C0E8 428 aa21.22■□□□□ 0.99
SHKBP1-204ENST00000594862 M0R2C6 588 aa21.21■□□□□ 0.99
SHKBP1-204ENST00000594862 APPP05067 770 aa21.21■□□□□ 0.99
SHKBP1-204ENST00000594862 GUCY1A2P33402 732 aa21.21■□□□□ 0.99
SHKBP1-204ENST00000594862 NUCB1Q02818 461 aa21.21■□□□□ 0.99
SHKBP1-204ENST00000594862 ICA1Q05084 483 aa21.21■□□□□ 0.99
SHKBP1-204ENST00000594862 SLAIN1Q8ND83 568 aa21.21■□□□□ 0.99
SHKBP1-204ENST00000594862 LPAR1Q92633 364 aa21.21■□□□□ 0.99
SHKBP1-204ENST00000594862 BRCA2P51587 3418 aa21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 CYP2D7A0A087X1C5 515 aa21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 PATL2C9JE40 543 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 VCAM1P19320 739 aa21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 GRK4P32298 578 aa21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 PRKCZQ05513 592 aa21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 IRF5Q13568 498 aa21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 ZYXQ15942 572 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 PRPF38BQ5VTL8 546 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 GPRC5AQ8NFJ5 357 aa21.2■□□□□ 0.98
SHKBP1-204ENST00000594862 KIAA0100Q14667 2235 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-204ENST00000594862 SLC3A2P08195 630 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-204ENST00000594862 EVX2Q03828 476 aa21.19■□□□□ 0.98
SHKBP1-204ENST00000594862 ACER1Q8TDN7 264 aa21.19■□□□□ 0.98
SHKBP1-204ENST00000594862 P2RX7Q99572 595 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-204ENST00000594862 KANSL2Q9H9L4 492 aa21.19■□□□□ 0.98
SHKBP1-204ENST00000594862 ECM2O94769 699 aaPredicted RBP21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 AKR1B1P15121 316 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 UBXN2AP68543 259 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 B4GALNT3Q6L9W6 998 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 LBX2Q6XYB7 198 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 PXYLP1Q8TE99 480 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 NAPBQ9H115 298 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 MKNK2Q9HBH9 465 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 HELLSQ9NRZ9 838 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 RABGAP1Q9Y3P9 1069 aa21.18■□□□□ 0.98
SHKBP1-204ENST00000594862 MINDY4BA8MYZ0 360 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 IGHDP01880 384 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 MAPK4P31152 587 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 FLT3LGP49771 235 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 CCNA1P78396 465 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 CATSPERGQ6ZRH7 1159 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 CCAR1Q8IX12 1150 aaKnown RBP21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 IFNL3Q8IZI9 196 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 OSBPL3Q9H4L5 887 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 EPB41L4AQ9HCS5 686 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 TMX2Q9Y320 296 aa21.17■□□□□ 0.98
SHKBP1-204ENST00000594862 GREB1LQ9C091 1923 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-204ENST00000594862 SH3TC2Q8TF17 1288 aa21.16■□□□□ 0.98
SHKBP1-204ENST00000594862 SOCS4Q8WXH5 440 aa21.16■□□□□ 0.98
SHKBP1-204ENST00000594862 RPAP3Q9H6T3 665 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-204ENST00000594862 A0A1W2PRG0 241 aa21.15■□□□□ 0.98
SHKBP1-204ENST00000594862 TRIM6-TRIM34B2RNG4 842 aa21.15■□□□□ 0.98
SHKBP1-204ENST00000594862 ERVK-9P63128 1117 aa21.15■□□□□ 0.98
SHKBP1-204ENST00000594862 ERVK-24P63145 666 aa21.15■□□□□ 0.98
SHKBP1-204ENST00000594862 PDE4BQ07343 736 aa21.15■□□□□ 0.98
SHKBP1-204ENST00000594862 SEC62Q99442 399 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-204ENST00000594862 VCPKMTQ9H867 229 aa21.15■□□□□ 0.98
SHKBP1-204ENST00000594862 GOPCQ9HD26 462 aa21.15■□□□□ 0.98
SHKBP1-204ENST00000594862 WDR46O15213 610 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 ADCY3O60266 1144 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms