RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 RGS19P49795 217 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 SEPT2Q15019 361 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 FAM110CQ1W6H9 321 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 SHROOM1Q2M3G4 852 aaPredicted RBP20.77■□□□□ 0.92
IRF3-208ENST00000594387 CTR9Q6PD62 1173 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 GTF3C2Q8WUA4 911 aaPredicted RBP20.77■□□□□ 0.92
IRF3-208ENST00000594387 COA7Q96BR5 231 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 TMEM106CQ9BVX2 250 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 ARHGEF10LQ9HCE6 1279 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 SRRDQ9UH36 339 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 MYPNQ86TC9 1320 aa20.77■□□□□ 0.91
IRF3-208ENST00000594387 TRIM6-TRIM34B2RNG4 842 aa20.76■□□□□ 0.91
IRF3-208ENST00000594387 PATL2C9JE40 543 aaKnown RBP20.76■□□□□ 0.91
IRF3-208ENST00000594387 SBK1Q52WX2 424 aa20.76■□□□□ 0.91
IRF3-208ENST00000594387 CHD1LQ86WJ1 897 aa20.76■□□□□ 0.91
IRF3-208ENST00000594387 CCAR1Q8IX12 1150 aaKnown RBP20.76■□□□□ 0.91
IRF3-208ENST00000594387 TRIM47Q96LD4 638 aa20.76■□□□□ 0.91
IRF3-208ENST00000594387 KIAA1683Q9H0B3 1180 aa20.76■□□□□ 0.91
IRF3-208ENST00000594387 SH2D4AQ9H788 454 aa20.76■□□□□ 0.91
IRF3-208ENST00000594387 MKNK2Q9HBH9 465 aa20.76■□□□□ 0.91
IRF3-208ENST00000594387 CYP2D7A0A087X1C5 515 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 GSG1L2A8MUP6 293 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L15C9J2P7 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L13C9JLJ4 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L11C9JVI0 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L18D6R9N7 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L22D6RA61 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L17D6RBQ6 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L19D6RCP7 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L20D6RJB6 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 IGHDP01880 384 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 USP17L24Q0WX57 530 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 C16orf86Q6ZW13 317 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 SLC44A5Q8NCS7 719 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 EMILIN3Q9NT22 766 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 SALL3Q9BXA9 1300 aa20.75■□□□□ 0.91
IRF3-208ENST00000594387 M0R2C6 588 aa20.74■□□□□ 0.91
IRF3-208ENST00000594387 SLC3A2P08195 630 aaKnown RBP20.74■□□□□ 0.91
IRF3-208ENST00000594387 CAP1Q01518 475 aa20.74■□□□□ 0.91
IRF3-208ENST00000594387 ZMYM1Q5SVZ6 1142 aa20.74■□□□□ 0.91
IRF3-208ENST00000594387 ARMC5Q96C12 935 aa20.74■□□□□ 0.91
IRF3-208ENST00000594387 C12orf42Q96LP6 360 aa20.74■□□□□ 0.91
IRF3-208ENST00000594387 BIN2Q9UBW5 565 aaPredicted RBP20.74■□□□□ 0.91
IRF3-208ENST00000594387 RBBP6Q7Z6E9 1792 aaKnown RBP20.73■□□□□ 0.91
IRF3-208ENST00000594387 HERVK_113P62684 666 aa20.73■□□□□ 0.91
IRF3-208ENST00000594387 NUCB1Q02818 461 aa20.73■□□□□ 0.91
IRF3-208ENST00000594387 TICAM2Q86XR7 235 aa20.73■□□□□ 0.91
IRF3-208ENST00000594387 RILPL2Q969X0 211 aa20.73■□□□□ 0.91
IRF3-208ENST00000594387 P2RX7Q99572 595 aaKnown RBP20.73■□□□□ 0.91
IRF3-208ENST00000594387 NAPBQ9H115 298 aa20.73■□□□□ 0.91
IRF3-208ENST00000594387 AKR1B1P15121 316 aa20.72■□□□□ 0.91
IRF3-208ENST00000594387 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
IRF3-208ENST00000594387 EVX2Q03828 476 aa20.72■□□□□ 0.91
IRF3-208ENST00000594387 ICA1Q05084 483 aa20.72■□□□□ 0.91
IRF3-208ENST00000594387 IFNL3Q8IZI9 196 aa20.72■□□□□ 0.91
IRF3-208ENST00000594387 ZNF444Q8N0Y2 327 aaPredicted RBP20.72■□□□□ 0.91
IRF3-208ENST00000594387 GPRC5AQ8NFJ5 357 aa20.72■□□□□ 0.91
IRF3-208ENST00000594387 ACER1Q8TDN7 264 aa20.72■□□□□ 0.91
IRF3-208ENST00000594387 KANSL2Q9H9L4 492 aa20.72■□□□□ 0.91
IRF3-208ENST00000594387 CWC22Q9HCG8 908 aaKnown RBP20.72■□□□□ 0.91
IRF3-208ENST00000594387 MYH4Q9Y623 1939 aa20.72■□□□□ 0.91
IRF3-208ENST00000594387 CTGFP29279 349 aa20.71■□□□□ 0.91
IRF3-208ENST00000594387 GRK4P32298 578 aa20.71■□□□□ 0.91
IRF3-208ENST00000594387 GUCY1A2P33402 732 aa20.71■□□□□ 0.91
IRF3-208ENST00000594387 UBXN2AP68543 259 aa20.71■□□□□ 0.91
IRF3-208ENST00000594387 ATP2B2Q01814 1243 aa20.71■□□□□ 0.91
IRF3-208ENST00000594387 STK11IPQ8N1F8 1099 aa20.71■□□□□ 0.91
IRF3-208ENST00000594387 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
IRF3-208ENST00000594387 HELLSQ9NRZ9 838 aa20.71■□□□□ 0.91
IRF3-208ENST00000594387 VCAM1P19320 739 aa20.7■□□□□ 0.9
IRF3-208ENST00000594387 PRKCZQ05513 592 aa20.7■□□□□ 0.9
IRF3-208ENST00000594387 PDE4BQ07343 736 aa20.7■□□□□ 0.9
IRF3-208ENST00000594387 CATSPERGQ6ZRH7 1159 aa20.7■□□□□ 0.9
IRF3-208ENST00000594387 PAGR1Q9BTK6 254 aa20.7■□□□□ 0.9
IRF3-208ENST00000594387 RPAP3Q9H6T3 665 aaPredicted RBP20.7■□□□□ 0.9
IRF3-208ENST00000594387 MORF4L1Q9UBU8 362 aa20.7■□□□□ 0.9
IRF3-208ENST00000594387 CCNA1P78396 465 aa20.69■□□□□ 0.9
IRF3-208ENST00000594387 SLAIN1Q8ND83 568 aa20.69■□□□□ 0.9
IRF3-208ENST00000594387 SH3TC2Q8TF17 1288 aa20.69■□□□□ 0.9
IRF3-208ENST00000594387 LPAR1Q92633 364 aa20.69■□□□□ 0.9
IRF3-208ENST00000594387 ZNF333Q96JL9 665 aa20.69■□□□□ 0.9
IRF3-208ENST00000594387 TANGO6Q9C0B7 1094 aa20.69■□□□□ 0.9
IRF3-208ENST00000594387 RAD21O60216 631 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 ADCY3O60266 1144 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 MYCP01106 439 aaPredicted RBP20.68■□□□□ 0.9
IRF3-208ENST00000594387 FLT3LGP49771 235 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 MFAP1P55081 439 aaKnown RBP20.68■□□□□ 0.9
IRF3-208ENST00000594387 MCMDC2Q4G0Z9 681 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 PLEKHM2Q8IWE5 1019 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 GOPCQ9HD26 462 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 HOXC10Q9NYD6 342 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 GABRQQ9UN88 632 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 RABGAP1Q9Y3P9 1069 aa20.68■□□□□ 0.9
IRF3-208ENST00000594387 MAPK4P31152 587 aa20.67■□□□□ 0.9
IRF3-208ENST00000594387 COG2Q14746 738 aa20.67■□□□□ 0.9
IRF3-208ENST00000594387 OSBPL3Q9H4L5 887 aa20.67■□□□□ 0.9
IRF3-208ENST00000594387 TMX2Q9Y320 296 aa20.67■□□□□ 0.9
IRF3-208ENST00000594387 ROBO3Q96MS0 1386 aa20.67■□□□□ 0.9
IRF3-208ENST00000594387 A0A1W2PRG0 241 aa20.66■□□□□ 0.9
IRF3-208ENST00000594387 EEF2P13639 858 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms