RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 TRIM47Q96LD4 638 aa24■■□□□ 1.43
COPE-204ENST00000593827 ARHGAP39Q9C0H5 1083 aa24■■□□□ 1.43
COPE-204ENST00000593827 PHIPQ8WWQ0 1821 aa24■■□□□ 1.43
COPE-204ENST00000593827 DDX60LQ5H9U9 1706 aaKnown RBP23.99■■□□□ 1.43
COPE-204ENST00000593827 IGHDP01880 384 aa23.99■■□□□ 1.43
COPE-204ENST00000593827 SEPT2Q15019 361 aa23.99■■□□□ 1.43
COPE-204ENST00000593827 RAET1EQ8TD07 263 aa23.99■■□□□ 1.43
COPE-204ENST00000593827 ARMC5Q96C12 935 aa23.99■■□□□ 1.43
COPE-204ENST00000593827 ARHGEF10LQ9HCE6 1279 aa23.99■■□□□ 1.43
COPE-204ENST00000593827 PTCH2Q9Y6C5 1203 aa23.99■■□□□ 1.43
COPE-204ENST00000593827 ATAD5Q96QE3 1844 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L15C9J2P7 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L13C9JLJ4 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L11C9JVI0 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L18D6R9N7 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L22D6RA61 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L17D6RBQ6 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L19D6RCP7 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L20D6RJB6 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 SLC3A2P08195 630 aaKnown RBP23.98■■□□□ 1.43
COPE-204ENST00000593827 USP17L24Q0WX57 530 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 SLC44A5Q8NCS7 719 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 COA7Q96BR5 231 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 MKNK2Q9HBH9 465 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 EMILIN3Q9NT22 766 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 MYH7P12883 1935 aa23.98■■□□□ 1.43
COPE-204ENST00000593827 TRIM6-TRIM34B2RNG4 842 aa23.97■■□□□ 1.43
COPE-204ENST00000593827 M0R2C6 588 aa23.97■■□□□ 1.43
COPE-204ENST00000593827 TNPO2O14787 897 aaKnown RBP23.97■■□□□ 1.43
COPE-204ENST00000593827 ZYXQ15942 572 aaKnown RBP23.97■■□□□ 1.43
COPE-204ENST00000593827 MYPNQ86TC9 1320 aa23.97■■□□□ 1.43
COPE-204ENST00000593827 CYP2D7A0A087X1C5 515 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 MINDY4BA8MYZ0 360 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 SOX10P56693 466 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 HERVK_113P62684 666 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 ICA1Q05084 483 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 NAPBQ9H115 298 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 KANSL2Q9H9L4 492 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 HELLSQ9NRZ9 838 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 PTPRFP10586 1907 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 LOC285556D6RIA3 1793 aa23.96■■□□□ 1.43
COPE-204ENST00000593827 GUCY1A2P33402 732 aa23.95■■□□□ 1.42
COPE-204ENST00000593827 CAP1Q01518 475 aa23.95■■□□□ 1.42
COPE-204ENST00000593827 IFNL3Q8IZI9 196 aa23.95■■□□□ 1.42
COPE-204ENST00000593827 ACER1Q8TDN7 264 aa23.95■■□□□ 1.42
COPE-204ENST00000593827 LPAR1Q92633 364 aa23.95■■□□□ 1.42
COPE-204ENST00000593827 P2RX7Q99572 595 aaKnown RBP23.95■■□□□ 1.42
COPE-204ENST00000593827 TMEM106CQ9BVX2 250 aa23.95■■□□□ 1.42
COPE-204ENST00000593827 OSBPL3Q9H4L5 887 aa23.95■■□□□ 1.42
COPE-204ENST00000593827 MORF4L1Q9UBU8 362 aa23.95■■□□□ 1.42
COPE-204ENST00000593827 AKR1B1P15121 316 aa23.94■■□□□ 1.42
COPE-204ENST00000593827 VCAM1P19320 739 aa23.94■■□□□ 1.42
COPE-204ENST00000593827 EVX2Q03828 476 aa23.94■■□□□ 1.42
COPE-204ENST00000593827 CCAR1Q8IX12 1150 aaKnown RBP23.94■■□□□ 1.42
COPE-204ENST00000593827 GPRC5AQ8NFJ5 357 aa23.94■■□□□ 1.42
COPE-204ENST00000593827 ROBO3Q96MS0 1386 aa23.93■■□□□ 1.42
COPE-204ENST00000593827 ECM2O94769 699 aaPredicted RBP23.93■■□□□ 1.42
COPE-204ENST00000593827 MFAP1P55081 439 aaKnown RBP23.93■■□□□ 1.42
COPE-204ENST00000593827 PDE4BQ07343 736 aa23.93■■□□□ 1.42
COPE-204ENST00000593827 RILPL2Q969X0 211 aa23.93■■□□□ 1.42
COPE-204ENST00000593827 ZNF333Q96JL9 665 aa23.93■■□□□ 1.42
COPE-204ENST00000593827 CTGFP29279 349 aa23.92■■□□□ 1.42
COPE-204ENST00000593827 GRK4P32298 578 aa23.92■■□□□ 1.42
COPE-204ENST00000593827 CCNA1P78396 465 aa23.92■■□□□ 1.42
COPE-204ENST00000593827 CATSPERGQ6ZRH7 1159 aa23.92■■□□□ 1.42
COPE-204ENST00000593827 PLEKHM2Q8IWE5 1019 aa23.92■■□□□ 1.42
COPE-204ENST00000593827 ZNF444Q8N0Y2 327 aaPredicted RBP23.92■■□□□ 1.42
COPE-204ENST00000593827 SLAIN1Q8ND83 568 aa23.92■■□□□ 1.42
COPE-204ENST00000593827 SEC62Q99442 399 aaKnown RBP23.92■■□□□ 1.42
COPE-204ENST00000593827 EPB41L4AQ9HCS5 686 aaPredicted RBP23.92■■□□□ 1.42
COPE-204ENST00000593827 TMX2Q9Y320 296 aa23.92■■□□□ 1.42
COPE-204ENST00000593827 RABGAP1Q9Y3P9 1069 aa23.92■■□□□ 1.42
COPE-204ENST00000593827 HIP1O00291 1037 aa23.91■■□□□ 1.42
COPE-204ENST00000593827 UBXN2AP68543 259 aa23.91■■□□□ 1.42
COPE-204ENST00000593827 PRKCZQ05513 592 aa23.91■■□□□ 1.42
COPE-204ENST00000593827 MCMDC2Q4G0Z9 681 aa23.91■■□□□ 1.42
COPE-204ENST00000593827 RPAP3Q9H6T3 665 aaPredicted RBP23.91■■□□□ 1.42
COPE-204ENST00000593827 HOXC10Q9NYD6 342 aa23.91■■□□□ 1.42
COPE-204ENST00000593827 MAPK4P31152 587 aa23.9■■□□□ 1.42
COPE-204ENST00000593827 IRX6P78412 446 aaPredicted RBP23.9■■□□□ 1.42
COPE-204ENST00000593827 IRF5Q13568 498 aa23.9■■□□□ 1.42
COPE-204ENST00000593827 PPP4R3BQ5MIZ7 849 aa23.9■■□□□ 1.42
COPE-204ENST00000593827 CWC22Q9HCG8 908 aaKnown RBP23.9■■□□□ 1.42
COPE-204ENST00000593827 GOPCQ9HD26 462 aa23.9■■□□□ 1.42
COPE-204ENST00000593827 BIN2Q9UBW5 565 aaPredicted RBP23.9■■□□□ 1.42
COPE-204ENST00000593827 FLT3LGP49771 235 aa23.89■■□□□ 1.41
COPE-204ENST00000593827 ATP2B2Q01814 1243 aa23.89■■□□□ 1.41
COPE-204ENST00000593827 LBX2Q6XYB7 198 aa23.89■■□□□ 1.41
COPE-204ENST00000593827 TANGO6Q9C0B7 1094 aa23.89■■□□□ 1.41
COPE-204ENST00000593827 VCPKMTQ9H867 229 aa23.89■■□□□ 1.41
COPE-204ENST00000593827 HTTP42858 3142 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 A0A1W2PRG0 241 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 RASA1P20936 1047 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 ERVK-9P63128 1117 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 ERVK-24P63145 666 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 COG2Q14746 738 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 PXYLP1Q8TE99 480 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 SH3TC2Q8TF17 1288 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 PAGR1Q9BTK6 254 aa23.88■■□□□ 1.41
COPE-204ENST00000593827 WDR46O15213 610 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms