RNA–Protein interactions for RNA: ENST00000593336.3

LINC01828-204, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-204ENST00000593336 C9orf78Q9NZ63 289 aaPredicted RBP6.82□□□□□ -1.32
LINC01828-204ENST00000593336 C4BP0C0L5 1744 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 TNS1Q9HBL0 1735 aaKnown RBP6.81□□□□□ -1.32
LINC01828-204ENST00000593336 PNPLA7Q6ZV29 1317 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 MYH14Q7Z406 1995 aaKnown RBP6.81□□□□□ -1.32
LINC01828-204ENST00000593336 A0A0A0MRY4 1105 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 PNMA6EA0A0J9YXQ4 647 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 NTSR2O95665 410 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 PCCAP05165 728 aaPredicted RBP6.81□□□□□ -1.32
LINC01828-204ENST00000593336 SELPP16109 830 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 HMGB2P26583 209 aaKnown RBP6.81□□□□□ -1.32
LINC01828-204ENST00000593336 TM4SF1P30408 202 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 RFC4P35249 363 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 SF3B2Q13435 895 aaKnown RBP6.81□□□□□ -1.32
LINC01828-204ENST00000593336 MTX1Q13505 466 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 SLC15A2Q16348 729 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 HSP90AB3PQ58FF7 597 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 SH3PXD2AQ5TCZ1 1133 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 UBE3BQ7Z3V4 1068 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 NBPF11Q86T75 865 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 LARGE2Q8N3Y3 721 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 ZBTB38Q8NAP3 1195 aaPredicted RBP6.81□□□□□ -1.32
LINC01828-204ENST00000593336 FAM89AQ96GI7 184 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 SUSD3Q96L08 255 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 TFCP2L1Q9NZI6 479 aa6.81□□□□□ -1.32
LINC01828-204ENST00000593336 RFX5P48382 616 aaPredicted RBP6.8□□□□□ -1.32
LINC01828-204ENST00000593336 NFIXQ14938 502 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 RABL6Q3YEC7 729 aaPredicted RBP6.8□□□□□ -1.32
LINC01828-204ENST00000593336 PARP10Q53GL7 1025 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 TBCELQ5QJ74 424 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 PPP1R42Q7Z4L9 355 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 NPM2Q86SE8 214 aaKnown RBP6.8□□□□□ -1.32
LINC01828-204ENST00000593336 TPCN2Q8NHX9 752 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 SSH3Q8TE77 659 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 PHACTR1Q9C0D0 580 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 PDGFDQ9GZP0 370 aaPredicted RBP6.8□□□□□ -1.32
LINC01828-204ENST00000593336 TSPAN10Q9H1Z9 355 aaPredicted RBP6.8□□□□□ -1.32
LINC01828-204ENST00000593336 RWDD1Q9H446 243 aaPredicted RBP6.8□□□□□ -1.32
LINC01828-204ENST00000593336 BICC1Q9H694 974 aaKnown RBP6.8□□□□□ -1.32
LINC01828-204ENST00000593336 DCTPP1Q9H773 170 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 SLC6A14Q9UN76 642 aa6.8□□□□□ -1.32
LINC01828-204ENST00000593336 NIP7Q9Y221 180 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINC01828-204ENST00000593336 CDHR2Q9BYE9 1310 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 NUP188Q5SRE5 1749 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 PALM3A6NDB9 673 aaPredicted RBP6.79□□□□□ -1.32
LINC01828-204ENST00000593336 SFI1A8K8P3 1242 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 CSF1RP07333 972 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 DDR1Q08345 913 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 SLC10A5Q5PT55 438 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 IER5Q5VY09 327 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 CCDC102BQ68D86 513 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 RAB44Q7Z6P3 723 aaPredicted RBP6.79□□□□□ -1.32
LINC01828-204ENST00000593336 SKAP1Q86WV1 359 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 SMC5Q8IY18 1101 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 DTWD1Q8N5C7 304 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 FLAD1Q8NFF5 587 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 UTP14AQ9BVJ6 771 aaKnown RBP6.79□□□□□ -1.32
LINC01828-204ENST00000593336 PLA2G12BQ9BX93 195 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 TRMT112Q9UI30 125 aaKnown RBP6.79□□□□□ -1.32
LINC01828-204ENST00000593336 ZNF652Q9Y2D9 606 aa6.79□□□□□ -1.32
LINC01828-204ENST00000593336 FAM177BA6PVY3 158 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 IRS4O14654 1257 aaPredicted RBP6.78□□□□□ -1.32
LINC01828-204ENST00000593336 PCSK7Q16549 785 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 LMBR1LQ6UX01 489 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 CENPQQ7L2Z9 268 aaPredicted RBP6.78□□□□□ -1.32
LINC01828-204ENST00000593336 BTLAQ7Z6A9 289 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 SIX5Q8N196 739 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 DEPDC4Q8N2C3 294 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 TTLL11Q8NHH1 800 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 BHMTQ93088 406 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 HSH2DQ96JZ2 352 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 SETDB2Q96T68 719 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 KRTAP4-12Q9BQ66 201 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
LINC01828-204ENST00000593336 UBE2OQ9C0C9 1292 aaKnown RBP6.78□□□□□ -1.32
LINC01828-204ENST00000593336 JPH1Q9HDC5 661 aaPredicted RBP6.78□□□□□ -1.32
LINC01828-204ENST00000593336 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 NOP58Q9Y2X3 529 aaKnown RBP6.78□□□□□ -1.32
LINC01828-204ENST00000593336 TAF1LQ8IZX4 1826 aa6.78□□□□□ -1.32
LINC01828-204ENST00000593336 SH3TC1Q8TE82 1336 aa6.77□□□□□ -1.32
LINC01828-204ENST00000593336 RGPD3A6NKT7 1758 aaPredicted RBP6.77□□□□□ -1.33
LINC01828-204ENST00000593336 RGPD4Q7Z3J3 1758 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 ARFGEF2Q9Y6D5 1785 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 USP17L3A6NCW0 530 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 USP17L4A6NCW7 530 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 POLRMTO00411 1230 aaKnown RBP6.77□□□□□ -1.33
LINC01828-204ENST00000593336 SRGAP3O43295 1099 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 PDE8AO60658 829 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 SERPINB2P05120 415 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 HCLS1P14317 486 aaPredicted RBP6.77□□□□□ -1.33
LINC01828-204ENST00000593336 AFF1P51825 1210 aaKnown RBP6.77□□□□□ -1.33
LINC01828-204ENST00000593336 CLDN10P78369 228 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 NUCB1Q02818 461 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 PTPN12Q05209 780 aaKnown RBP6.77□□□□□ -1.33
LINC01828-204ENST00000593336 USP17L2Q6R6M4 530 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 USP17L1Q7RTZ2 530 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 FMR1NBQ8N0W7 255 aaPredicted RBP6.77□□□□□ -1.33
LINC01828-204ENST00000593336 NLGN1Q8N2Q7 840 aa6.77□□□□□ -1.33
LINC01828-204ENST00000593336 ZNF280CQ8ND82 737 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms