RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 PARD6AQ9NPB6 346 aa8.72□□□□□ -1.01
SOX2-OT-219ENST00000593330 RFXAPO00287 272 aa8.71□□□□□ -1.02
SOX2-OT-219ENST00000593330 RALGPS1Q5JS13 557 aa8.71□□□□□ -1.02
SOX2-OT-219ENST00000593330 SPPL2CQ8IUH8 684 aa8.71□□□□□ -1.02
SOX2-OT-219ENST00000593330 ESR1P03372 595 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 HOXA5P20719 270 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 GRK4P32298 578 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 RPS26P62854 115 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 PDE4BQ07343 736 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 ZNF385BQ569K4 471 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 SLC6A19Q695T7 634 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 MRPL41Q8IXM3 137 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 BAHD1Q8TBE0 780 aaPredicted RBP8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 IRF2BPLQ9H1B7 796 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 ZCCHC4Q9H5U6 513 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 KCNH3Q9ULD8 1083 aa8.7□□□□□ -1.02
SOX2-OT-219ENST00000593330 TPP2P29144 1249 aaPredicted RBP8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 SNX17Q15036 470 aa8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 NR0B2Q15466 257 aa8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 TCERG1LQ5VWI1 586 aa8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 ERICH6BQ5W0A0 696 aa8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 TMEM132EQ6IEE7 984 aa8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 RIN3Q8TB24 985 aa8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 ADAMTS10Q9H324 1103 aa8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 CNTNAP4Q9C0A0 1308 aa8.69□□□□□ -1.02
SOX2-OT-219ENST00000593330 CELA3AP09093 270 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 DLG4P78352 724 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 CHRNEQ04844 493 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 RASIP1Q5U651 963 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 TTBK2Q6IQ55 1244 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 XAGE3Q8WTP9 111 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 OSBPL7Q9BZF2 842 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 RNF32Q9H0A6 362 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 C12orf49Q9H741 205 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 DUSP13Q9UII6 198 aa8.68□□□□□ -1.02
SOX2-OT-219ENST00000593330 MAPK8P45983 427 aa8.67□□□□□ -1.02
SOX2-OT-219ENST00000593330 CDH24Q86UP0 819 aa8.67□□□□□ -1.02
SOX2-OT-219ENST00000593330 GAL3ST3Q96A11 431 aa8.67□□□□□ -1.02
SOX2-OT-219ENST00000593330 C1orf115Q9H7X2 142 aa8.67□□□□□ -1.02
SOX2-OT-219ENST00000593330 CNOT6Q9ULM6 557 aaKnown RBP8.67□□□□□ -1.02
SOX2-OT-219ENST00000593330 ERVFC1P60507 584 aa8.66□□□□□ -1.02
SOX2-OT-219ENST00000593330 DUSP4Q13115 394 aa8.66□□□□□ -1.02
SOX2-OT-219ENST00000593330 GAB4Q2WGN9 574 aa8.66□□□□□ -1.02
SOX2-OT-219ENST00000593330 DBX2Q6ZNG2 339 aa8.66□□□□□ -1.02
SOX2-OT-219ENST00000593330 KRTAP9-3Q9BYQ3 159 aa8.66□□□□□ -1.02
SOX2-OT-219ENST00000593330 GPR62Q9BZJ7 368 aa8.66□□□□□ -1.02
SOX2-OT-219ENST00000593330 TTF2Q9UNY4 1162 aaKnown RBP8.66□□□□□ -1.02
SOX2-OT-219ENST00000593330 GNEQ9Y223 722 aaKnown RBP8.66□□□□□ -1.02
SOX2-OT-219ENST00000593330 TEX51A0A1B0GUA7 166 aa8.65□□□□□ -1.02
SOX2-OT-219ENST00000593330 PGRP06401 933 aa8.65□□□□□ -1.02
SOX2-OT-219ENST00000593330 USP17L7P0C7H9 530 aa8.65□□□□□ -1.02
SOX2-OT-219ENST00000593330 EGR3Q06889 387 aa8.65□□□□□ -1.02
SOX2-OT-219ENST00000593330 KCNK12Q9HB15 430 aa8.65□□□□□ -1.02
SOX2-OT-219ENST00000593330 ADAM30Q9UKF2 790 aa8.65□□□□□ -1.02
SOX2-OT-219ENST00000593330 SYN1P17600 705 aa8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 BMP7P18075 431 aa8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 LTKP29376 864 aa8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 PTPN11Q06124 597 aaPredicted RBP8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 FMR1Q06787 632 aaKnown RBP eCLIP8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 TSPYL5Q86VY4 417 aaPredicted RBP8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 TMEM87BQ96K49 555 aa8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 MCOLN1Q9GZU1 580 aa8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 DUSP15Q9H1R2 295 aaPredicted RBP8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 CEP131Q9UPN4 1083 aa8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 YBX2Q9Y2T7 364 aaKnown RBP8.64□□□□□ -1.03
SOX2-OT-219ENST00000593330 ZGLP1P0C6A0 271 aa8.63□□□□□ -1.03
SOX2-OT-219ENST00000593330 ZNF605Q86T29 641 aa8.63□□□□□ -1.03
SOX2-OT-219ENST00000593330 BORCS6Q96GS4 357 aa8.63□□□□□ -1.03
SOX2-OT-219ENST00000593330 INTS4Q96HW7 963 aaKnown RBP8.63□□□□□ -1.03
SOX2-OT-219ENST00000593330 ZNF552Q9H707 407 aaPredicted RBP8.63□□□□□ -1.03
SOX2-OT-219ENST00000593330 GFRA2O00451 464 aa8.62□□□□□ -1.03
SOX2-OT-219ENST00000593330 PDE6BP35913 854 aa8.62□□□□□ -1.03
SOX2-OT-219ENST00000593330 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.62□□□□□ -1.03
SOX2-OT-219ENST00000593330 MCATQ8IVS2 390 aaKnown RBP8.62□□□□□ -1.03
SOX2-OT-219ENST00000593330 ANKS4BQ8N8V4 417 aa8.62□□□□□ -1.03
SOX2-OT-219ENST00000593330 FOXD2O60548 495 aaPredicted RBP8.61□□□□□ -1.03
SOX2-OT-219ENST00000593330 RLBP1P12271 317 aa8.61□□□□□ -1.03
SOX2-OT-219ENST00000593330 NFIXQ14938 502 aa8.61□□□□□ -1.03
SOX2-OT-219ENST00000593330 C20orf173Q96LM9 149 aa8.61□□□□□ -1.03
SOX2-OT-219ENST00000593330 MIR1-1HGQ9H1L0 117 aa8.61□□□□□ -1.03
SOX2-OT-219ENST00000593330 TJP2Q9UDY2 1190 aa8.61□□□□□ -1.03
SOX2-OT-219ENST00000593330 SASH1O94885 1247 aa8.6□□□□□ -1.03
SOX2-OT-219ENST00000593330 TRHRP34981 398 aaPredicted RBP8.6□□□□□ -1.03
SOX2-OT-219ENST00000593330 YARSP54577 528 aaKnown RBP8.6□□□□□ -1.03
SOX2-OT-219ENST00000593330 CCDC85BQ15834 202 aaPredicted RBP8.6□□□□□ -1.03
SOX2-OT-219ENST00000593330 TSNAXIP1Q2TAA8 658 aa8.6□□□□□ -1.03
SOX2-OT-219ENST00000593330 C19orf44Q9H6X5 657 aa8.6□□□□□ -1.03
SOX2-OT-219ENST00000593330 HRKO00198 91 aa8.59□□□□□ -1.03
SOX2-OT-219ENST00000593330 DNAJB8Q8NHS0 232 aa8.59□□□□□ -1.03
SOX2-OT-219ENST00000593330 CYB5D2Q8WUJ1 264 aa8.59□□□□□ -1.03
SOX2-OT-219ENST00000593330 Q96M66 194 aa8.59□□□□□ -1.03
SOX2-OT-219ENST00000593330 KCNC2Q96PR1 638 aa8.59□□□□□ -1.03
SOX2-OT-219ENST00000593330 KCTD3Q9Y597 815 aa8.59□□□□□ -1.03
SOX2-OT-219ENST00000593330 OLFML2BQ68BL8 750 aa8.58□□□□□ -1.04
SOX2-OT-219ENST00000593330 C14orf37Q86TY3 774 aa8.58□□□□□ -1.04
SOX2-OT-219ENST00000593330 DTWD2Q8NBA8 298 aa8.58□□□□□ -1.04
SOX2-OT-219ENST00000593330 ASB16Q96NS5 453 aa8.58□□□□□ -1.04
SOX2-OT-219ENST00000593330 DPH2Q9BQC3 489 aaPredicted RBP8.58□□□□□ -1.04
SOX2-OT-219ENST00000593330 SP110Q9HB58 689 aa8.58□□□□□ -1.04
SOX2-OT-219ENST00000593330 RTEL1Q9NZ71 1219 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms