RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PDE3AQ14432 1141 aa24.81■■□□□ 1.56
TRIM47-207ENST00000593089 POTEEQ6S8J3 1075 aa24.81■■□□□ 1.56
TRIM47-207ENST00000593089 ACER1Q8TDN7 264 aa24.81■■□□□ 1.56
TRIM47-207ENST00000593089 GTF3C2Q8WUA4 911 aaPredicted RBP24.81■■□□□ 1.56
TRIM47-207ENST00000593089 SOCS4Q8WXH5 440 aa24.81■■□□□ 1.56
TRIM47-207ENST00000593089 EDC3Q96F86 508 aaKnown RBP24.81■■□□□ 1.56
TRIM47-207ENST00000593089 C12orf42Q96LP6 360 aa24.81■■□□□ 1.56
TRIM47-207ENST00000593089 PORCNQ9H237 461 aa24.81■■□□□ 1.56
TRIM47-207ENST00000593089 MCM9Q9NXL9 1143 aa24.81■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L15C9J2P7 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L13C9JLJ4 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L11C9JVI0 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L18D6R9N7 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L22D6RA61 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L17D6RBQ6 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L19D6RCP7 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L20D6RJB6 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 EVI5O60447 810 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 RAB11FIP3O75154 756 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP14P54578 494 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 EVX2Q03828 476 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 USP17L24Q0WX57 530 aa24.8■■□□□ 1.56
TRIM47-207ENST00000593089 DIS3LQ8TF46 1054 aaKnown RBP24.8■■□□□ 1.56
TRIM47-207ENST00000593089 RBM27Q9P2N5 1060 aaKnown RBP24.8■■□□□ 1.56
TRIM47-207ENST00000593089 TCRBV5S4A2TA0A5A2 114 aa24.79■■□□□ 1.56
TRIM47-207ENST00000593089 GPR142Q7Z601 462 aa24.79■■□□□ 1.56
TRIM47-207ENST00000593089 LCORLQ8N3X6 602 aa24.79■■□□□ 1.56
TRIM47-207ENST00000593089 SDR42E1Q8WUS8 393 aa24.79■■□□□ 1.56
TRIM47-207ENST00000593089 KIAA1683Q9H0B3 1180 aa24.79■■□□□ 1.56
TRIM47-207ENST00000593089 CWC22Q9HCG8 908 aaKnown RBP24.79■■□□□ 1.56
TRIM47-207ENST00000593089 VCAM1P19320 739 aa24.78■■□□□ 1.56
TRIM47-207ENST00000593089 NECAB2Q7Z6G3 386 aa24.78■■□□□ 1.56
TRIM47-207ENST00000593089 BOLA2Q9H3K6 86 aa24.78■■□□□ 1.56
TRIM47-207ENST00000593089 RCAN3Q9UKA8 241 aa24.78■■□□□ 1.56
TRIM47-207ENST00000593089 ALPK3Q96L96 1907 aa24.78■■□□□ 1.56
TRIM47-207ENST00000593089 MPHOSPH10O00566 681 aaKnown RBP24.77■■□□□ 1.56
TRIM47-207ENST00000593089 XRCC5P13010 732 aaKnown RBP24.77■■□□□ 1.56
TRIM47-207ENST00000593089 PRKAR2AP13861 404 aaKnown RBP24.77■■□□□ 1.56
TRIM47-207ENST00000593089 GUCY1A2P33402 732 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 GABPAQ06546 454 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 SEPT2Q15019 361 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 CATSPERGQ6ZRH7 1159 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 PLEKHH3Q7Z736 793 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 CHMP4BQ9H444 224 aaKnown RBP24.77■■□□□ 1.56
TRIM47-207ENST00000593089 ARMT1Q9H993 441 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 PAG1Q9NWQ8 432 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 RABGAP1Q9Y3P9 1069 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 TRIOBPQ9H2D6 2365 aa24.77■■□□□ 1.56
TRIM47-207ENST00000593089 CNMDO75829 334 aa24.76■■□□□ 1.55
TRIM47-207ENST00000593089 ZKSCAN1P17029 563 aaPredicted RBP24.76■■□□□ 1.55
TRIM47-207ENST00000593089 SLFNL1Q499Z3 407 aa24.76■■□□□ 1.55
TRIM47-207ENST00000593089 ANKLE1Q8NAG6 615 aa24.76■■□□□ 1.55
TRIM47-207ENST00000593089 USP6NLQ92738 828 aa24.76■■□□□ 1.55
TRIM47-207ENST00000593089 DCP1AQ9NPI6 582 aaPredicted RBP24.76■■□□□ 1.55
TRIM47-207ENST00000593089 CYP2D6P10635 497 aa24.75■■□□□ 1.55
TRIM47-207ENST00000593089 RGS2P41220 211 aa24.75■■□□□ 1.55
TRIM47-207ENST00000593089 CCL14Q16627 93 aa24.75■■□□□ 1.55
TRIM47-207ENST00000593089 MORN1Q5T089 497 aa24.75■■□□□ 1.55
TRIM47-207ENST00000593089 MAP3K21Q5TCX8 1036 aa24.75■■□□□ 1.55
TRIM47-207ENST00000593089 RPAP3Q9H6T3 665 aaPredicted RBP24.75■■□□□ 1.55
TRIM47-207ENST00000593089 MYH8P13535 1937 aa24.74■■□□□ 1.55
TRIM47-207ENST00000593089 ADD2P35612 726 aa24.74■■□□□ 1.55
TRIM47-207ENST00000593089 CCNA1P78396 465 aa24.74■■□□□ 1.55
TRIM47-207ENST00000593089 WDR78Q5VTH9 848 aa24.74■■□□□ 1.55
TRIM47-207ENST00000593089 TRMT44Q8IYL2 757 aaKnown RBP24.74■■□□□ 1.55
TRIM47-207ENST00000593089 PRKAB2O43741 272 aa24.73■■□□□ 1.55
TRIM47-207ENST00000593089 MBD4O95243 580 aa24.73■■□□□ 1.55
TRIM47-207ENST00000593089 ATP5JP18859 108 aa24.73■■□□□ 1.55
TRIM47-207ENST00000593089 CACNB2Q08289 660 aaPredicted RBP24.73■■□□□ 1.55
TRIM47-207ENST00000593089 SLC44A5Q8NCS7 719 aa24.73■■□□□ 1.55
TRIM47-207ENST00000593089 APBA2Q99767 749 aa24.73■■□□□ 1.55
TRIM47-207ENST00000593089 BAZ2AQ9UIF9 1905 aaKnown RBP24.73■■□□□ 1.55
TRIM47-207ENST00000593089 C20orf194Q5TEA3 1177 aa24.72■■□□□ 1.55
TRIM47-207ENST00000593089 DYNLL2Q96FJ2 89 aa24.72■■□□□ 1.55
TRIM47-207ENST00000593089 HAUS7Q99871 368 aa24.72■■□□□ 1.55
TRIM47-207ENST00000593089 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.72■■□□□ 1.55
TRIM47-207ENST00000593089 NBPF3Q9H094 633 aa24.72■■□□□ 1.55
TRIM47-207ENST00000593089 PRO3102Q9H379 93 aa24.72■■□□□ 1.55
TRIM47-207ENST00000593089 BTBD7Q9P203 1132 aa24.72■■□□□ 1.55
TRIM47-207ENST00000593089 OGDHLQ9ULD0 1010 aa24.72■■□□□ 1.55
TRIM47-207ENST00000593089 MYH7P12883 1935 aa24.72■■□□□ 1.55
TRIM47-207ENST00000593089 A0A1W2PRG0 241 aa24.71■■□□□ 1.55
TRIM47-207ENST00000593089 SPDYE16A6NNV3 312 aaPredicted RBP24.71■■□□□ 1.55
TRIM47-207ENST00000593089 GLRX3O76003 335 aaKnown RBP24.71■■□□□ 1.55
TRIM47-207ENST00000593089 CCND3P30281 292 aaPredicted RBP24.71■■□□□ 1.55
TRIM47-207ENST00000593089 MNX1P50219 401 aaPredicted RBP24.71■■□□□ 1.55
TRIM47-207ENST00000593089 MAP2K5Q13163 448 aa24.71■■□□□ 1.55
TRIM47-207ENST00000593089 LBX2Q6XYB7 198 aa24.71■■□□□ 1.55
TRIM47-207ENST00000593089 C11orf49Q9H6J7 331 aa24.71■■□□□ 1.55
TRIM47-207ENST00000593089 CHGBP05060 677 aa24.7■■□□□ 1.54
TRIM47-207ENST00000593089 C7orf61Q8IZ16 206 aa24.7■■□□□ 1.54
TRIM47-207ENST00000593089 LRRCC1Q9C099 1032 aa24.7■■□□□ 1.54
TRIM47-207ENST00000593089 SWAP70Q9UH65 585 aa24.7■■□□□ 1.54
TRIM47-207ENST00000593089 SMARCA5O60264 1052 aaPredicted RBP24.69■■□□□ 1.54
TRIM47-207ENST00000593089 TMEM179Q6ZVK1 233 aa24.69■■□□□ 1.54
TRIM47-207ENST00000593089 TANGO6Q9C0B7 1094 aa24.69■■□□□ 1.54
TRIM47-207ENST00000593089 ATP8A2Q9NTI2 1148 aa24.69■■□□□ 1.54
TRIM47-207ENST00000593089 CYP2D7A0A087X1C5 515 aa24.68■■□□□ 1.54
TRIM47-207ENST00000593089 SLC15A5A6NIM6 579 aa24.68■■□□□ 1.54
TRIM47-207ENST00000593089 PTPREP23469 700 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms