RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 PRRT2Q7Z6L0 340 aaPredicted RBP11.79□□□□□ -0.52
TPM4-216ENST00000592822 ACER1Q8TDN7 264 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 STAG1Q8WVM7 1258 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 TAF6LQ9Y6J9 622 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 NEDD4P46934 1319 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 IGKV6D-41A0A0C4DH26 115 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 RANBP6O60518 1105 aaKnown RBP11.78□□□□□ -0.52
TPM4-216ENST00000592822 BACE1P56817 501 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
TPM4-216ENST00000592822 DGKZQ13574 1117 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 MTMR2Q13614 643 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 NECTIN1Q15223 517 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 RRP12Q5JTH9 1297 aaKnown RBP11.78□□□□□ -0.52
TPM4-216ENST00000592822 GPAT2Q6NUI2 795 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 NEDD1Q8NHV4 660 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
TPM4-216ENST00000592822 KANSL2Q9H9L4 492 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 TOMM22Q9NS69 142 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 WBP1LQ9NX94 342 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 PLIN4Q96Q06 1357 aa11.78□□□□□ -0.52
TPM4-216ENST00000592822 BTBD19C9JJ37 291 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 USP17L10C9JJH3 530 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 SLC27A2O14975 620 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 TSPY3P0CV98 308 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 TSPY8P0CW00 308 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 EEF2P13639 858 aaKnown RBP11.77□□□□□ -0.53
TPM4-216ENST00000592822 HMGCS2P54868 508 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 ICA1Q05084 483 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 SH3D19Q5HYK7 790 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 CREB3L3Q68CJ9 461 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 FAM43AQ8N2R8 423 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 KIAA1683Q9H0B3 1180 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 RNF186Q9NXI6 227 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 MYH4Q9Y623 1939 aa11.77□□□□□ -0.53
TPM4-216ENST00000592822 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 B4E1Z4 1266 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 C19orf81C9J6K1 198 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 E7EWF7 191 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 NMT2O60551 498 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 ZYXQ15942 572 aaKnown RBP11.76□□□□□ -0.53
TPM4-216ENST00000592822 TREML2Q5T2D2 321 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 GADL1Q6ZQY3 521 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 STOX1Q6ZVD7 989 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 FASTKD5Q7L8L6 764 aaKnown RBP11.76□□□□□ -0.53
TPM4-216ENST00000592822 ANKRD23Q86SG2 305 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
TPM4-216ENST00000592822 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 FEZ1Q99689 392 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 MTMR4Q9NYA4 1195 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 TMX2Q9Y320 296 aa11.76□□□□□ -0.53
TPM4-216ENST00000592822 PDHXO00330 501 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 KDM4AO75164 1064 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 TRPA1O75762 1119 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 REC8O95072 547 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 NOVP48745 357 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 ATP2B2Q01814 1243 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 KIAA1755Q5JYT7 1200 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 USP17L2Q6R6M4 530 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 ESR2Q92731 530 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 CNNM2Q9H8M5 875 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 ARHGEF10LQ9HCE6 1279 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 ZCCHC17Q9NP64 241 aaKnown RBP11.75□□□□□ -0.53
TPM4-216ENST00000592822 TCP11L1Q9NUJ3 509 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 TMOD4Q9NZQ9 345 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 ZSWIM5Q9P217 1185 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 NYAP2Q9P242 653 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
TPM4-216ENST00000592822 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
TPM4-216ENST00000592822 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
TPM4-216ENST00000592822 USP14P54578 494 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 OTUD7BQ6GQQ9 843 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 CYB5R4Q7L1T6 521 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 MKL1Q969V6 931 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 C12orf42Q96LP6 360 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 USP26Q9BXU7 913 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 KRT23Q9C075 422 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 R3HDMLQ9H3Y0 253 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 SH2D4AQ9H788 454 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 SAGE1Q9NXZ1 904 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 AGTPBP1Q9UPW5 1226 aa11.74□□□□□ -0.53
TPM4-216ENST00000592822 FOXN1O15353 648 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 EPB41L2O43491 1005 aaKnown RBP11.73□□□□□ -0.53
TPM4-216ENST00000592822 CA12O43570 354 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 TTLL1O95922 423 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 ALDH1A1P00352 501 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 HSPA4P34932 840 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 NT5C2P49902 561 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 CRHR2Q13324 411 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 COL9A3Q14050 684 aaPredicted RBP11.73□□□□□ -0.53
TPM4-216ENST00000592822 C8orf34Q49A92 452 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 RNF20Q5VTR2 975 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 KCNB2Q92953 911 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 ZKSCAN3Q9BRR0 538 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms