RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TPM4P67936 248 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 DIXDC1Q155Q3 683 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 C12orf60Q5U649 245 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 CCDC125Q86Z20 511 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 TRIM22Q8IYM9 498 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 SH3RF3Q8TEJ3 882 aaPredicted RBP16.41■□□□□ 0.22
RANBP3-229ENST00000592771 FAM163AQ96GL9 167 aaPredicted RBP16.41■□□□□ 0.22
RANBP3-229ENST00000592771 TIGD1Q96MW7 591 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 UBE2Q2LH0YL09 131 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 DDAH1O94760 285 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 DEXIO95424 95 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 KCNJ6P48051 423 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 FUT2Q10981 343 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 TROAPQ12815 778 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 TRIM29Q14134 588 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 IFIT1BQ5T764 474 aaKnown RBP16.41■□□□□ 0.22
RANBP3-229ENST00000592771 ANO1Q5XXA6 986 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 TBC1D22AQ8WUA7 517 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 C16orf45Q96MC5 204 aaPredicted RBP16.41■□□□□ 0.22
RANBP3-229ENST00000592771 RNF26Q9BY78 433 aaPredicted RBP16.41■□□□□ 0.22
RANBP3-229ENST00000592771 MCM9Q9NXL9 1143 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 GPR75-ASB3A0A0A6YYF3 556 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 CALM1P0DP23 149 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 CALM2P0DP24 149 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 CALM3P0DP25 149 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 CMA1P23946 247 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 PDE4BQ07343 736 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 CEP135Q66GS9 1140 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 CATIPQ7Z7H3 387 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 TSC1Q92574 1164 aa16.4■□□□□ 0.22
RANBP3-229ENST00000592771 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.4■□□□□ 0.22
RANBP3-229ENST00000592771 USP17L8P0C7I0 530 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 SKILP12757 684 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 UTP14CQ5TAP6 766 aaKnown RBP16.39■□□□□ 0.21
RANBP3-229ENST00000592771 NYAP1Q6ZVC0 841 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 CCDC150Q8NCX0 1101 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 NUP133Q8WUM0 1156 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 RBM28Q9NW13 759 aaKnown RBP16.39■□□□□ 0.21
RANBP3-229ENST00000592771 GAKO14976 1311 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 MMP1P03956 469 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 MMP10P09238 476 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 USP5P45974 858 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 NLRP12P59046 1061 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 SLC39A14Q15043 492 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 AOPEPQ8N6M6 819 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 NOL10Q9BSC4 688 aaKnown RBP16.39■□□□□ 0.21
RANBP3-229ENST00000592771 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
RANBP3-229ENST00000592771 QSER1Q2KHR3 1735 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 FOCADQ5VW36 1801 aa16.39■□□□□ 0.21
RANBP3-229ENST00000592771 C6orf229H3BNL8 230 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 MYO1BO43795 1136 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 NRDCO43847 1150 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 PDE6BP35913 854 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 NDUFA8P51970 172 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 CCZ1BP86790 482 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 CCZ1P86791 482 aaPredicted RBP16.38■□□□□ 0.21
RANBP3-229ENST00000592771 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 COA1Q9GZY4 146 aa16.38■□□□□ 0.21
RANBP3-229ENST00000592771 IKBKBO14920 756 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 ALDH1B1P30837 517 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 BTDP43251 543 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 NCBP1Q09161 790 aaKnown RBP16.37■□□□□ 0.21
RANBP3-229ENST00000592771 PTPAQ15257 358 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 AXDND1Q5T1B0 1012 aaPredicted RBP16.37■□□□□ 0.21
RANBP3-229ENST00000592771 ANKS1AQ92625 1134 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 MAP3K14Q99558 947 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 FOXP1Q9H334 677 aaPredicted RBP16.37■□□□□ 0.21
RANBP3-229ENST00000592771 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 A0A1B0GVL5 298 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
RANBP3-229ENST00000592771 PPP6R2O75170 966 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 PLCG2P16885 1265 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 RCSD1Q6JBY9 416 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 TMTC3Q6ZXV5 915 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 SLF2Q8IX21 1173 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 MASTLQ96GX5 879 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 SUGT1Q9Y2Z0 365 aa16.37■□□□□ 0.21
RANBP3-229ENST00000592771 FAM237AA0A1B0GTK4 181 aa16.36■□□□□ 0.21
RANBP3-229ENST00000592771 ZNF202O95125 648 aa16.36■□□□□ 0.21
RANBP3-229ENST00000592771 RHBDL3P58872 404 aa16.36■□□□□ 0.21
RANBP3-229ENST00000592771 PKN1Q16512 942 aa16.36■□□□□ 0.21
RANBP3-229ENST00000592771 NOSTRINQ8IVI9 506 aa16.36■□□□□ 0.21
RANBP3-229ENST00000592771 CCAR2Q8N163 923 aaKnown RBP16.36■□□□□ 0.21
RANBP3-229ENST00000592771 CMTR1Q8N1G2 835 aaKnown RBP16.36■□□□□ 0.21
RANBP3-229ENST00000592771 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
RANBP3-229ENST00000592771 UPF1Q92900 1129 aaKnown RBP eCLIP16.36■□□□□ 0.217e-7■■■■■ 28.7
RANBP3-229ENST00000592771 PKNOX2Q96KN3 472 aa16.36■□□□□ 0.21
RANBP3-229ENST00000592771 PSDA5PKW4 1024 aaPredicted RBP16.35■□□□□ 0.21
RANBP3-229ENST00000592771 TSPY2A6NKD2 308 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 NMT2O60551 498 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
RANBP3-229ENST00000592771 AMOTL1Q8IY63 956 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 DIS3L2Q8IYB7 885 aaKnown RBP16.35■□□□□ 0.21
RANBP3-229ENST00000592771 ELOA2Q8IYF1 753 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms