RNA–Protein interactions for RNA: ENST00000592628.5

TCF3-217, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-217ENST00000592628 CCDC17Q96LX7 622 aa18.29■□□□□ 0.52
TCF3-217ENST00000592628 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
TCF3-217ENST00000592628 KAT14Q9H8E8 782 aa18.29■□□□□ 0.52
TCF3-217ENST00000592628 STX8Q9UNK0 236 aa18.29■□□□□ 0.52
TCF3-217ENST00000592628 IGKV6D-41A0A0C4DH26 115 aa18.28■□□□□ 0.52
TCF3-217ENST00000592628 BRD1O95696 1058 aa18.28■□□□□ 0.52
TCF3-217ENST00000592628 NOVP48745 357 aa18.28■□□□□ 0.52
TCF3-217ENST00000592628 HIRAP54198 1017 aaPredicted RBP18.28■□□□□ 0.52
TCF3-217ENST00000592628 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
TCF3-217ENST00000592628 NTRK3Q16288 839 aa18.28■□□□□ 0.52
TCF3-217ENST00000592628 LARP1BQ659C4 914 aaKnown RBP18.28■□□□□ 0.52
TCF3-217ENST00000592628 TNPO1Q92973 898 aaKnown RBP18.28■□□□□ 0.52
TCF3-217ENST00000592628 TMEM47Q9BQJ4 181 aa18.28■□□□□ 0.52
TCF3-217ENST00000592628 HERC5Q9UII4 1024 aaKnown RBP18.28■□□□□ 0.52
TCF3-217ENST00000592628 MPHOSPH10O00566 681 aaKnown RBP18.27■□□□□ 0.52
TCF3-217ENST00000592628 STX6O43752 255 aa18.27■□□□□ 0.52
TCF3-217ENST00000592628 DDAH1O94760 285 aa18.27■□□□□ 0.52
TCF3-217ENST00000592628 FDPSP14324 419 aaKnown RBP18.27■□□□□ 0.52
TCF3-217ENST00000592628 TNFAIP1Q13829 316 aa18.27■□□□□ 0.52
TCF3-217ENST00000592628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.27■□□□□ 0.526e-6■■■□□ 15.9
TCF3-217ENST00000592628 MTMR4Q9NYA4 1195 aa18.27■□□□□ 0.52
TCF3-217ENST00000592628 CALM1P0DP23 149 aa18.27■□□□□ 0.51
TCF3-217ENST00000592628 CALM2P0DP24 149 aa18.27■□□□□ 0.51
TCF3-217ENST00000592628 CALM3P0DP25 149 aa18.27■□□□□ 0.51
TCF3-217ENST00000592628 SHROOM1Q2M3G4 852 aaPredicted RBP18.27■□□□□ 0.51
TCF3-217ENST00000592628 FOXD4L5Q5VV16 416 aaPredicted RBP18.27■□□□□ 0.51
TCF3-217ENST00000592628 DPY19L2Q6NUT2 758 aa18.27■□□□□ 0.51
TCF3-217ENST00000592628 FAM184AQ8NB25 1140 aa18.27■□□□□ 0.51
TCF3-217ENST00000592628 PNMA1Q8ND90 353 aa18.27■□□□□ 0.51
TCF3-217ENST00000592628 FOXD4L4Q8WXT5 416 aaPredicted RBP18.27■□□□□ 0.51
TCF3-217ENST00000592628 POLR2AP24928 1970 aaKnown RBP18.27■□□□□ 0.51
TCF3-217ENST00000592628 CCDC196A0A1B0GTZ2 297 aa18.26■□□□□ 0.51
TCF3-217ENST00000592628 LMOD1P29536 600 aaPredicted RBP18.26■□□□□ 0.51
TCF3-217ENST00000592628 RRP1BQ14684 758 aaKnown RBP18.26■□□□□ 0.51
TCF3-217ENST00000592628 PPP2R5BQ15173 497 aa18.26■□□□□ 0.51
TCF3-217ENST00000592628 ANGEL2Q5VTE6 544 aaKnown RBP18.26■□□□□ 0.51
TCF3-217ENST00000592628 CPLX2Q6PUV4 134 aaKnown RBP18.26■□□□□ 0.51
TCF3-217ENST00000592628 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
TCF3-217ENST00000592628 TBC1D12O60347 775 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 CDKL5O76039 1030 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 GDF11O95390 407 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 PDCP20941 246 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 MIGA2Q7L4E1 593 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 CLEC10AQ8IUN9 316 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 PHKBQ93100 1093 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 DEFB129Q9H1M3 183 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 ADARB2Q9NS39 739 aaKnown RBP18.25■□□□□ 0.51
TCF3-217ENST00000592628 WDR33Q9C0J8 1336 aaKnown RBP18.25■□□□□ 0.51
TCF3-217ENST00000592628 MYH4Q9Y623 1939 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
TCF3-217ENST00000592628 IFNAR1P17181 557 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 CMTR1Q8N1G2 835 aaKnown RBP18.25■□□□□ 0.51
TCF3-217ENST00000592628 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
TCF3-217ENST00000592628 ORC3Q9UBD5 711 aaPredicted RBP18.25■□□□□ 0.51
TCF3-217ENST00000592628 MTMR6Q9Y217 621 aa18.25■□□□□ 0.51
TCF3-217ENST00000592628 JAG1P78504 1218 aa18.24■□□□□ 0.51
TCF3-217ENST00000592628 MAP3K10Q02779 954 aa18.24■□□□□ 0.51
TCF3-217ENST00000592628 ABCB5Q2M3G0 1257 aa18.24■□□□□ 0.51
TCF3-217ENST00000592628 CTCFLQ8NI51 663 aaPredicted RBP18.24■□□□□ 0.51
TCF3-217ENST00000592628 GGA3Q9NZ52 723 aa18.24■□□□□ 0.51
TCF3-217ENST00000592628 CLIP2Q9UDT6 1046 aa18.24■□□□□ 0.51
TCF3-217ENST00000592628 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
TCF3-217ENST00000592628 TTLL1O95922 423 aa18.23■□□□□ 0.51
TCF3-217ENST00000592628 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
TCF3-217ENST00000592628 GUCY1A2P33402 732 aa18.23■□□□□ 0.51
TCF3-217ENST00000592628 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
TCF3-217ENST00000592628 APOBEC3FQ8IUX4 373 aaKnown RBP18.23■□□□□ 0.51
TCF3-217ENST00000592628 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
TCF3-217ENST00000592628 L3MBTL3Q96JM7 780 aaPredicted RBP18.23■□□□□ 0.51
TCF3-217ENST00000592628 MAP3K14Q99558 947 aa18.23■□□□□ 0.51
TCF3-217ENST00000592628 KIF3AQ9Y496 699 aa18.23■□□□□ 0.51
TCF3-217ENST00000592628 MYH6P13533 1939 aa18.23■□□□□ 0.51
TCF3-217ENST00000592628 VPS37CA5D8V6 355 aaPredicted RBP18.22■□□□□ 0.51
TCF3-217ENST00000592628 GLTPD2A6NH11 291 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 PLEKHA8P1O95397 391 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 PDIA4P13667 645 aaKnown RBP18.22■□□□□ 0.51
TCF3-217ENST00000592628 SSRP1Q08945 709 aaKnown RBP18.22■□□□□ 0.51
TCF3-217ENST00000592628 SEPT2Q15019 361 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 TMEM179Q6ZVK1 233 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 MTMR7Q9Y216 660 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 FMNL1O95466 1100 aaPredicted RBP18.22■□□□□ 0.51
TCF3-217ENST00000592628 GH2P01242 217 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 FOSBP53539 338 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 GRM4Q14833 912 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 TMTC3Q6ZXV5 915 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 CDC37L1Q7L3B6 337 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
TCF3-217ENST00000592628 CABP5Q9NP86 173 aa18.22■□□□□ 0.51
TCF3-217ENST00000592628 BAZ2BQ9UIF8 2168 aaKnown RBP18.22■□□□□ 0.51
TCF3-217ENST00000592628 STK36Q9NRP7 1315 aa18.21■□□□□ 0.51
TCF3-217ENST00000592628 UBE2Q2LH0YL09 131 aa18.21■□□□□ 0.51
TCF3-217ENST00000592628 FUT2Q10981 343 aa18.21■□□□□ 0.51
TCF3-217ENST00000592628 NFKBIBQ15653 356 aa18.21■□□□□ 0.51
TCF3-217ENST00000592628 NBPF12Q5TAG4 269 aaPredicted RBP18.21■□□□□ 0.51
TCF3-217ENST00000592628 STAG2Q8N3U4 1231 aa18.21■□□□□ 0.51
TCF3-217ENST00000592628 SRBD1Q8N5C6 995 aaKnown RBP18.21■□□□□ 0.51
TCF3-217ENST00000592628 KANSL2Q9H9L4 492 aa18.21■□□□□ 0.51
TCF3-217ENST00000592628 MAD2L2Q9UI95 211 aa18.21■□□□□ 0.51
TCF3-217ENST00000592628 F13A1P00488 732 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms