RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 MAPK4P31152 587 aa12.3□□□□□ -0.44
VMP1-214ENST00000592106 USP14P54578 494 aa12.3□□□□□ -0.44
VMP1-214ENST00000592106 HERVK_113P62684 666 aa12.3□□□□□ -0.44
VMP1-214ENST00000592106 TRMT44Q8IYL2 757 aaKnown RBP12.3□□□□□ -0.44
VMP1-214ENST00000592106 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
VMP1-214ENST00000592106 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
VMP1-214ENST00000592106 MAGEB6P1A0A0J9YX57 407 aa12.29□□□□□ -0.44
VMP1-214ENST00000592106 H0YGN5 161 aa12.29□□□□□ -0.44
VMP1-214ENST00000592106 RAB11FIP3O75154 756 aa12.29□□□□□ -0.44
VMP1-214ENST00000592106 GH2P01242 217 aa12.29□□□□□ -0.44
VMP1-214ENST00000592106 POLR3DP05423 398 aaPredicted RBP12.29□□□□□ -0.44
VMP1-214ENST00000592106 GPRC5AQ8NFJ5 357 aa12.29□□□□□ -0.44
VMP1-214ENST00000592106 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
VMP1-214ENST00000592106 DEFB118Q96PH6 123 aa12.29□□□□□ -0.44
VMP1-214ENST00000592106 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
VMP1-214ENST00000592106 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.29□□□□□ -0.44
VMP1-214ENST00000592106 PAK6Q9NQU5 681 aaPredicted RBP12.29□□□□□ -0.44
VMP1-214ENST00000592106 NAV1Q8NEY1 1877 aa12.29□□□□□ -0.44
VMP1-214ENST00000592106 APBB1O00213 710 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 CCNA1P78396 465 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 RAB3GAP1Q15042 981 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 CERKLQ49MI3 558 aaPredicted RBP12.28□□□□□ -0.44
VMP1-214ENST00000592106 TATDN1Q6P1N9 297 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 UBE2Q1Q7Z7E8 422 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 ANKLE1Q8NAG6 615 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 C12orf42Q96LP6 360 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 ANTXR1Q9H6X2 564 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
VMP1-214ENST00000592106 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
VMP1-214ENST00000592106 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
VMP1-214ENST00000592106 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 GLRX3O76003 335 aaKnown RBP12.27□□□□□ -0.45
VMP1-214ENST00000592106 ERVK-9P63128 1117 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 ERVK-24P63145 666 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 ZYXQ15942 572 aaKnown RBP12.27□□□□□ -0.45
VMP1-214ENST00000592106 SLC9C2Q5TAH2 1124 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 AMOTL1Q8IY63 956 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.45
VMP1-214ENST00000592106 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.45
VMP1-214ENST00000592106 PAGR1Q9BTK6 254 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.27□□□□□ -0.45
VMP1-214ENST00000592106 COG6Q9Y2V7 657 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 DDX60LQ5H9U9 1706 aaKnown RBP12.27□□□□□ -0.45
VMP1-214ENST00000592106 RPTORQ8N122 1335 aa12.27□□□□□ -0.45
VMP1-214ENST00000592106 GOLIM4O00461 696 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 EVI5O60447 810 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 XRCC5P13010 732 aaKnown RBP12.26□□□□□ -0.45
VMP1-214ENST00000592106 PDE6AP16499 860 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 ZKSCAN1P17029 563 aaPredicted RBP12.26□□□□□ -0.45
VMP1-214ENST00000592106 RGS2P41220 211 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 JAG1P78504 1218 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 NECAB2Q7Z6G3 386 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 DDRGK1Q96HY6 314 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 RIOK1Q9BRS2 568 aaKnown RBP12.26□□□□□ -0.45
VMP1-214ENST00000592106 KIAA1683Q9H0B3 1180 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 GJD2Q9UKL4 321 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 PCDHB8Q9UN66 801 aa12.26□□□□□ -0.45
VMP1-214ENST00000592106 CYP2B6P20813 491 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 FXR1P51114 621 aaKnown RBP eCLIP12.25□□□□□ -0.45
VMP1-214ENST00000592106 SHROOM1Q2M3G4 852 aaPredicted RBP12.25□□□□□ -0.45
VMP1-214ENST00000592106 PLEKHH3Q7Z736 793 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 APBA2Q99767 749 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 CRISPLD2Q9H0B8 497 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 BCL11AQ9H165 835 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 SWAP70Q9UH65 585 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 RCAN3Q9UKA8 241 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 RABGAP1Q9Y3P9 1069 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
VMP1-214ENST00000592106 MPHOSPH10O00566 681 aaKnown RBP12.24□□□□□ -0.45
VMP1-214ENST00000592106 VCAM1P19320 739 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 SHMT1P34896 483 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 TIE1P35590 1138 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 PDAP1Q13442 181 aaKnown RBP12.24□□□□□ -0.45
VMP1-214ENST00000592106 WDR78Q5VTH9 848 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 ZSCAN25Q6NSZ9 544 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 GPR142Q7Z601 462 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 TRIB2Q92519 343 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 TXNRD2Q9NNW7 524 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 PAG1Q9NWQ8 432 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 RBPJLQ9UBG7 517 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 IVNS1ABPQ9Y6Y0 642 aa12.24□□□□□ -0.45
VMP1-214ENST00000592106 DOCK3Q8IZD9 2030 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 PLCD1P51178 756 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 LBX2Q6XYB7 198 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 CATSPERGQ6ZRH7 1159 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 TMEM179Q6ZVK1 233 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 PAWRQ96IZ0 340 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms