RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 SIL1Q9H173 461 aa12.52□□□□□ -0.41
SDF2-209ENST00000591903 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.41
SDF2-209ENST00000591903 FLRT1Q9NZU1 646 aa12.52□□□□□ -0.41
SDF2-209ENST00000591903 UBTFL1P0CB47 393 aaPredicted RBP12.51□□□□□ -0.41
SDF2-209ENST00000591903 CYBAP13498 195 aa12.51□□□□□ -0.41
SDF2-209ENST00000591903 GRB14Q14449 540 aa12.51□□□□□ -0.41
SDF2-209ENST00000591903 TRIM60Q495X7 471 aa12.51□□□□□ -0.41
SDF2-209ENST00000591903 GJC2Q5T442 439 aaPredicted RBP12.51□□□□□ -0.41
SDF2-209ENST00000591903 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
SDF2-209ENST00000591903 ITPRIPQ8IWB1 547 aa12.51□□□□□ -0.41
SDF2-209ENST00000591903 USP38Q8NB14 1042 aa12.51□□□□□ -0.41
SDF2-209ENST00000591903 CLUAP1Q96AJ1 413 aa12.51□□□□□ -0.41
SDF2-209ENST00000591903 TRIM34Q9BYJ4 488 aa12.51□□□□□ -0.41
SDF2-209ENST00000591903 SUPT16HQ9Y5B9 1047 aaKnown RBP12.51□□□□□ -0.41
SDF2-209ENST00000591903 MYO9BQ13459 2157 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.5□□□□□ -0.41
SDF2-209ENST00000591903 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.5□□□□□ -0.41
SDF2-209ENST00000591903 DNAJB2P25686 324 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
SDF2-209ENST00000591903 MTX1Q13505 466 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 GRIN2CQ14957 1233 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 WDR78Q5VTH9 848 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 FOXP4Q8IVH2 680 aaPredicted RBP12.5□□□□□ -0.41
SDF2-209ENST00000591903 TEX11Q8IYF3 940 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 PANK1Q8TE04 598 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 NSUN4Q96CB9 384 aaKnown RBP12.5□□□□□ -0.41
SDF2-209ENST00000591903 GAS2L1Q99501 681 aaPredicted RBP12.5□□□□□ -0.41
SDF2-209ENST00000591903 NOL10Q9BSC4 688 aaKnown RBP12.5□□□□□ -0.41
SDF2-209ENST00000591903 THEGQ9P2T0 379 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 RAPGEFL1Q9UHV5 662 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 TACC3Q9Y6A5 838 aa12.5□□□□□ -0.41
SDF2-209ENST00000591903 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 SEPT4O43236 478 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 IGHA2P01877 340 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 GNAI2P04899 355 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 PLCG2P16885 1265 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 ADORA1P30542 326 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 CYP2C19P33261 490 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 MAP3K12Q12852 859 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 AKNAD1Q5T1N1 836 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 OLFML2BQ68BL8 750 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 POTEEQ6S8J3 1075 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 METTL16Q86W50 562 aaKnown RBP12.49□□□□□ -0.41
SDF2-209ENST00000591903 CRACR2BQ8N4Y2 399 aaPredicted RBP12.49□□□□□ -0.41
SDF2-209ENST00000591903 IL27Q8NEV9 243 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 ZNF384Q8TF68 577 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
SDF2-209ENST00000591903 C12orf42Q96LP6 360 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 ASB2Q96Q27 587 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 ZNF576Q9H609 170 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 ZBTB40Q9NUA8 1239 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 ZBTB21Q9ULJ3 1066 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 AKAP2Q9Y2D5 859 aa12.49□□□□□ -0.41
SDF2-209ENST00000591903 ARIH1Q9Y4X5 557 aaPredicted RBP12.49□□□□□ -0.41
SDF2-209ENST00000591903 CNMDO75829 334 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 BAG3O95817 575 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 CLTBP09497 229 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 USP14P54578 494 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 MRPS5P82675 430 aaKnown RBP12.48□□□□□ -0.41
SDF2-209ENST00000591903 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 TRPV1Q8NER1 839 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 UHRF1Q96T88 793 aaPredicted RBP12.48□□□□□ -0.41
SDF2-209ENST00000591903 MEIS3Q99687 375 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 C1QTNF1Q9BXJ1 281 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 TNNQ9UQP3 1299 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 COG6Q9Y2V7 657 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 MYH1P12882 1939 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
SDF2-209ENST00000591903 ZNFX1Q9P2E3 1918 aaKnown RBP12.47□□□□□ -0.41
SDF2-209ENST00000591903 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 STRNO43815 780 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 RAG1P15918 1043 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 ADCYAP1R1P41586 468 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 FPGSQ05932 587 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 ERICH6BQ5W0A0 696 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 CATSPERGQ6ZRH7 1159 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 DPP9Q86TI2 863 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 TIFAQ96CG3 184 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 COPRSQ9NQ92 184 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 SLC5A4Q9NY91 659 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 RAI14Q9P0K7 980 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 NDUFB9Q9Y6M9 179 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 SMCHD1A6NHR9 2005 aa12.47□□□□□ -0.41
SDF2-209ENST00000591903 A0A1B0GUL7 405 aa12.46□□□□□ -0.41
SDF2-209ENST00000591903 GDF11O95390 407 aa12.46□□□□□ -0.41
SDF2-209ENST00000591903 HLA-DOAP06340 250 aa12.46□□□□□ -0.41
SDF2-209ENST00000591903 TIMM10P62072 90 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms