RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 CSRNP1Q96S65 589 aa13.29□□□□□ -0.28
TUBD1-211ENST00000591548 RNF181Q9P0P0 153 aa13.29□□□□□ -0.28
TUBD1-211ENST00000591548 IGKV6D-41A0A0C4DH26 115 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 DDAH1O94760 285 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 FAM83AQ86UY5 434 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 FAM184AQ8NB25 1140 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 PHKBQ93100 1093 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 CEP95Q96GE4 821 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 TMEM47Q9BQJ4 181 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 PGAP2Q9UHJ9 254 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 STX8Q9UNK0 236 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
TUBD1-211ENST00000591548 CALM1P0DP23 149 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 CALM2P0DP24 149 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 CALM3P0DP25 149 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
TUBD1-211ENST00000591548 IFNAR1P17181 557 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 PPP2R5BQ15173 497 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 C9orf131Q5VYM1 1079 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 CMTR1Q8N1G2 835 aaKnown RBP13.28□□□□□ -0.28
TUBD1-211ENST00000591548 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 KAT14Q9H8E8 782 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
TUBD1-211ENST00000591548 ORC3Q9UBD5 711 aaPredicted RBP13.28□□□□□ -0.28
TUBD1-211ENST00000591548 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
TUBD1-211ENST00000591548 ASTN2O75129 1339 aaPredicted RBP13.27□□□□□ -0.28
TUBD1-211ENST00000591548 MYH8P13535 1937 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 CCDC196A0A1B0GTZ2 297 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 H7C1D1 291 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 CDKL5O76039 1030 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 DDNO94850 711 aaPredicted RBP13.27□□□□□ -0.29
TUBD1-211ENST00000591548 BAG4O95429 457 aaKnown RBP13.27□□□□□ -0.29
TUBD1-211ENST00000591548 MCM4P33991 863 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 NBR1Q14596 966 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 SHROOM1Q2M3G4 852 aaPredicted RBP13.27□□□□□ -0.29
TUBD1-211ENST00000591548 CPLX2Q6PUV4 134 aaKnown RBP13.27□□□□□ -0.29
TUBD1-211ENST00000591548 CDC37L1Q7L3B6 337 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 NBPF11Q86T75 865 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 CHAMP1Q96JM3 812 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
TUBD1-211ENST00000591548 GREB1LQ9C091 1923 aaPredicted RBP13.27□□□□□ -0.29
TUBD1-211ENST00000591548 UBE2Q2LH0YL09 131 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 F13A1P00488 732 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 EPS15P42566 896 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 FUT2Q10981 343 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
TUBD1-211ENST00000591548 GPR162Q16538 588 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 CERKLQ49MI3 558 aaPredicted RBP13.26□□□□□ -0.29
TUBD1-211ENST00000591548 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 CCDC82Q8N4S0 544 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 GBP4Q96PP9 640 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 HERC5Q9UII4 1024 aaKnown RBP13.26□□□□□ -0.29
TUBD1-211ENST00000591548 HACL1Q9UJ83 578 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
TUBD1-211ENST00000591548 MPHOSPH10O00566 681 aaKnown RBP13.25□□□□□ -0.29
TUBD1-211ENST00000591548 PLEKHA8P1O95397 391 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 FMNL1O95466 1100 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-211ENST00000591548 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
TUBD1-211ENST00000591548 FOSBP53539 338 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 JAG1P78504 1218 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 RASA3Q14644 834 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-211ENST00000591548 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 AIFM3Q96NN9 605 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 MAP3K14Q99558 947 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.25□□□□□ -0.29
TUBD1-211ENST00000591548 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
TUBD1-211ENST00000591548 STK36Q9NRP7 1315 aa13.25□□□□□ -0.29
TUBD1-211ENST00000591548 TNNI2P48788 182 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
TUBD1-211ENST00000591548 SSRP1Q08945 709 aaKnown RBP13.24□□□□□ -0.29
TUBD1-211ENST00000591548 TMTC3Q6ZXV5 915 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 GJB4Q9NTQ9 266 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 H3BQV1 296 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 TBC1D12O60347 775 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 GDF11O95390 407 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 TTLL1O95922 423 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 MAP3K10Q02779 954 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 TNFAIP1Q13829 316 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 GRM4Q14833 912 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 FOXD4L6Q3SYB3 417 aaPredicted RBP13.24□□□□□ -0.29
TUBD1-211ENST00000591548 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 FOXD4L3Q6VB84 417 aaPredicted RBP13.24□□□□□ -0.29
TUBD1-211ENST00000591548 RASGRP2Q7LDG7 609 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 STAG2Q8N3U4 1231 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
TUBD1-211ENST00000591548 ALG1Q9BT22 464 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
TUBD1-211ENST00000591548 MAD2L2Q9UI95 211 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms