RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 USP17L18D6R9N7 530 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L22D6RA61 530 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L17D6RBQ6 530 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L19D6RCP7 530 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L20D6RJB6 530 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 CYP7A1P22680 504 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 CNGA1P29973 690 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 ATN1P54259 1190 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-216ENST00000591275 CCNA1P78396 465 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L24Q0WX57 530 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 MFSD14CQ5VZR4 134 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 ATF7IPQ6VMQ6 1270 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 MIGA1Q8NAN2 632 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 FAM161BQ96MY7 647 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 GLRX3O76003 335 aaKnown RBP19.46■□□□□ 0.71
DDX39A-216ENST00000591275 RAB3GAP1Q15042 981 aa19.46■□□□□ 0.71
DDX39A-216ENST00000591275 LBHD1Q9BQE6 289 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-216ENST00000591275 GPR108Q9NPR9 543 aa19.46■□□□□ 0.71
DDX39A-216ENST00000591275 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
DDX39A-216ENST00000591275 PTPREP23469 700 aa19.45■□□□□ 0.7
DDX39A-216ENST00000591275 USP5P45974 858 aa19.45■□□□□ 0.7
DDX39A-216ENST00000591275 ACER1Q8TDN7 264 aa19.45■□□□□ 0.7
DDX39A-216ENST00000591275 C12orf42Q96LP6 360 aa19.45■□□□□ 0.7
DDX39A-216ENST00000591275 GUCD1Q96NT3 240 aa19.45■□□□□ 0.7
DDX39A-216ENST00000591275 COL25A1Q9BXS0 654 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-216ENST00000591275 BTBD7Q9P203 1132 aa19.45■□□□□ 0.7
DDX39A-216ENST00000591275 DDX20Q9UHI6 824 aaKnown RBP19.45■□□□□ 0.7
DDX39A-216ENST00000591275 EYSQ5T1H1 3165 aa19.45■□□□□ 0.7
DDX39A-216ENST00000591275 SLC15A5A6NIM6 579 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 POTEB2H3BUK9 544 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 BCAR3O75815 825 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 IDH1O75874 414 aaKnown RBP19.44■□□□□ 0.7
DDX39A-216ENST00000591275 VCAM1P19320 739 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 CYP2C19P33261 490 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 ATP2B2Q01814 1243 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 TATDN1Q6P1N9 297 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 CATSPERGQ6ZRH7 1159 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 NPLOC4Q8TAT6 608 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 TLR7Q9NYK1 1049 aaKnown RBP19.44■□□□□ 0.7
DDX39A-216ENST00000591275 SERPINB13Q9UIV8 391 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 IVNS1ABPQ9Y6Y0 642 aa19.44■□□□□ 0.7
DDX39A-216ENST00000591275 SURF6O75683 361 aaKnown RBP19.43■□□□□ 0.7
DDX39A-216ENST00000591275 USP14P54578 494 aa19.43■□□□□ 0.7
DDX39A-216ENST00000591275 POLA2Q14181 598 aa19.43■□□□□ 0.7
DDX39A-216ENST00000591275 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.43■□□□□ 0.7
DDX39A-216ENST00000591275 DBNLQ9UJU6 430 aaKnown RBP19.43■□□□□ 0.7
DDX39A-216ENST00000591275 VCANP13611 3396 aa19.43■□□□□ 0.7
DDX39A-216ENST00000591275 ABCB5Q2M3G0 1257 aa19.42■□□□□ 0.7
DDX39A-216ENST00000591275 CERKLQ49MI3 558 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-216ENST00000591275 FAM109BQ6ICB4 259 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-216ENST00000591275 MAGEB6Q8N7X4 407 aa19.42■□□□□ 0.7
DDX39A-216ENST00000591275 TRPV1Q8NER1 839 aa19.42■□□□□ 0.7
DDX39A-216ENST00000591275 LPAR1Q92633 364 aa19.42■□□□□ 0.7
DDX39A-216ENST00000591275 ZNF512BQ96KM6 892 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-216ENST00000591275 KIAA1683Q9H0B3 1180 aa19.42■□□□□ 0.7
DDX39A-216ENST00000591275 CCDC8Q9H0W5 538 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-216ENST00000591275 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-216ENST00000591275 PRUNE2Q8WUY3 3088 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 SPDYE16A6NNV3 312 aaPredicted RBP19.41■□□□□ 0.7
DDX39A-216ENST00000591275 MSCO60682 206 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 HOXC6P09630 235 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 RTP1P59025 263 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 GRB14Q14449 540 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 GJC2Q5T442 439 aaPredicted RBP19.41■□□□□ 0.7
DDX39A-216ENST00000591275 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 SSH3Q8TE77 659 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 EHD4Q9H223 541 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 C1orf115Q9H7X2 142 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 PRKAG2Q9UGJ0 569 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 ATP11BQ9Y2G3 1177 aa19.41■□□□□ 0.7
DDX39A-216ENST00000591275 DNM1LO00429 736 aa19.4■□□□□ 0.7
DDX39A-216ENST00000591275 ATP8B2P98198 1209 aa19.4■□□□□ 0.7
DDX39A-216ENST00000591275 ANO1Q5XXA6 986 aa19.4■□□□□ 0.7
DDX39A-216ENST00000591275 LBX2Q6XYB7 198 aa19.4■□□□□ 0.7
DDX39A-216ENST00000591275 CABP5Q9NP86 173 aa19.4■□□□□ 0.7
DDX39A-216ENST00000591275 LTBP2Q14767 1821 aa19.39■□□□□ 0.7
DDX39A-216ENST00000591275 IGSF3O75054 1194 aa19.39■□□□□ 0.69
DDX39A-216ENST00000591275 CYBAP13498 195 aa19.39■□□□□ 0.69
DDX39A-216ENST00000591275 SHMT1P34896 483 aa19.39■□□□□ 0.69
DDX39A-216ENST00000591275 ZNF697Q5TEC3 545 aa19.39■□□□□ 0.69
DDX39A-216ENST00000591275 TTC6Q86TZ1 520 aa19.39■□□□□ 0.69
DDX39A-216ENST00000591275 ANTXR1Q9H6X2 564 aa19.39■□□□□ 0.69
DDX39A-216ENST00000591275 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
DDX39A-216ENST00000591275 GUCY1A2P33402 732 aa19.38■□□□□ 0.69
DDX39A-216ENST00000591275 PLCD1P51178 756 aa19.38■□□□□ 0.69
DDX39A-216ENST00000591275 RLFQ13129 1914 aa19.38■□□□□ 0.69
DDX39A-216ENST00000591275 DPP9Q86TI2 863 aa19.38■□□□□ 0.69
DDX39A-216ENST00000591275 EAF2Q96CJ1 260 aaPredicted RBP19.38■□□□□ 0.69
DDX39A-216ENST00000591275 PRDM5Q9NQX1 630 aaPredicted RBP19.38■□□□□ 0.69
DDX39A-216ENST00000591275 ADORA2AP29274 412 aa19.37■□□□□ 0.69
DDX39A-216ENST00000591275 SEPT2Q15019 361 aa19.37■□□□□ 0.69
DDX39A-216ENST00000591275 SHHQ15465 462 aa19.37■□□□□ 0.69
DDX39A-216ENST00000591275 CERS3Q8IU89 383 aa19.37■□□□□ 0.69
DDX39A-216ENST00000591275 MOV10L1Q9BXT6 1211 aaKnown RBP19.37■□□□□ 0.69
DDX39A-216ENST00000591275 IGHA2P01877 340 aa19.36■□□□□ 0.69
DDX39A-216ENST00000591275 POLR3DP05423 398 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-216ENST00000591275 EVX2Q03828 476 aa19.36■□□□□ 0.69
DDX39A-216ENST00000591275 MAP3K12Q12852 859 aa19.36■□□□□ 0.69
DDX39A-216ENST00000591275 C9orf50Q5SZB4 431 aa19.36■□□□□ 0.69
DDX39A-216ENST00000591275 SLC39A5Q6ZMH5 540 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms