RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 IRF6O14896 467 aa15.18■□□□□ 0.02
DDX39A-213ENST00000590315 SNAPC2Q13487 334 aa15.18■□□□□ 0.02
DDX39A-213ENST00000590315 MTMR2Q13614 643 aa15.18■□□□□ 0.02
DDX39A-213ENST00000590315 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
DDX39A-213ENST00000590315 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
DDX39A-213ENST00000590315 ISY1Q9ULR0 285 aaKnown RBP15.18■□□□□ 0.02
DDX39A-213ENST00000590315 TAF6LQ9Y6J9 622 aa15.18■□□□□ 0.02
DDX39A-213ENST00000590315 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 CCL15-CCL14A0A0B4J2E2 113 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 MANSC4A6NHS7 340 aaPredicted RBP15.17■□□□□ 0.02
DDX39A-213ENST00000590315 FAM155AB1AL88 458 aaPredicted RBP15.17■□□□□ 0.02
DDX39A-213ENST00000590315 GUCY1A2P33402 732 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 GTF2A2P52657 109 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 KIF23Q02241 960 aaPredicted RBP15.17■□□□□ 0.02
DDX39A-213ENST00000590315 SREBF2Q12772 1141 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 CCL15Q16663 113 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 IQCA1Q86XH1 822 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 NEDD1Q8NHV4 660 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 CEP95Q96GE4 821 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 UBAC1Q9BSL1 405 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 SH2D4AQ9H788 454 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 KANSL2Q9H9L4 492 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
DDX39A-213ENST00000590315 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 STX8Q9UNK0 236 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 MTMR7Q9Y216 660 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 MYH6P13533 1939 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 PARP14Q460N5 1801 aa15.17■□□□□ 0.02
DDX39A-213ENST00000590315 USP17L10C9JJH3 530 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 NMT2O60551 498 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 SEC24BO95487 1268 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 EEF2P13639 858 aaKnown RBP15.16■□□□□ 0.02
DDX39A-213ENST00000590315 HSPA4P34932 840 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 HMGCS2P54868 508 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 KRT32Q14532 448 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 STOX1Q6ZVD7 989 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 LRRC47Q8N1G4 583 aaKnown RBP15.16■□□□□ 0.02
DDX39A-213ENST00000590315 ACER1Q8TDN7 264 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 USP26Q9BXU7 913 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 CLIP2Q9UDT6 1046 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 AFG3L2Q9Y4W6 797 aa15.16■□□□□ 0.02
DDX39A-213ENST00000590315 COL11A1P12107 1806 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-213ENST00000590315 ERICH2A1L162 156 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 FGRP09769 529 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 CETPP11597 493 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 DGKZQ13574 1117 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 PPP4R3BQ5MIZ7 849 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 CHST3Q7LGC8 479 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 CHMP4CQ96CF2 233 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 JAKMIP1Q96N16 626 aaKnown RBP15.15■□□□□ 0.02
DDX39A-213ENST00000590315 ZIC5Q96T25 663 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
DDX39A-213ENST00000590315 CXCL11O14625 94 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
DDX39A-213ENST00000590315 TTLL1O95922 423 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 USP14P54578 494 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 SART3Q15020 963 aaKnown RBP15.14■□□□□ 0.01
DDX39A-213ENST00000590315 USP17L2Q6R6M4 530 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-213ENST00000590315 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 RASEFQ8IZ41 740 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 NEK1Q96PY6 1258 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.01
DDX39A-213ENST00000590315 GOPCQ9HD26 462 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 ZSWIM5Q9P217 1185 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 KCNH4Q9UQ05 1017 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 SNX14Q9Y5W7 946 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 TNKSO95271 1327 aa15.14■□□□□ 0.01
DDX39A-213ENST00000590315 A0A0G2JLL6 359 aaPredicted RBP15.13■□□□□ 0.01
DDX39A-213ENST00000590315 C19orf81C9J6K1 198 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
DDX39A-213ENST00000590315 PRC1O43663 620 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 MCM5P33992 734 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 MAP2K2P36507 400 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 BACE1P56817 501 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 FGD1P98174 961 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 CCDC178Q5BJE1 867 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 OTUD7BQ6GQQ9 843 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 FASTKD5Q7L8L6 764 aaKnown RBP15.13■□□□□ 0.01
DDX39A-213ENST00000590315 PRRT2Q7Z6L0 340 aaPredicted RBP15.13■□□□□ 0.01
DDX39A-213ENST00000590315 NKX2-3Q8TAU0 364 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 MTMR4Q9NYA4 1195 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 NYAP2Q9P242 653 aa15.13■□□□□ 0.01
DDX39A-213ENST00000590315 IGKV6D-41A0A0C4DH26 115 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 CASTP20810 708 aaKnown RBP15.12■□□□□ 0.01
DDX39A-213ENST00000590315 NT5C2P49902 561 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 ADCK5Q3MIX3 580 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 TMEM67Q5HYA8 995 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 BLOC1S2Q6QNY1 142 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 MB21D2Q8IYB1 491 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-213ENST00000590315 SPICE1Q8N0Z3 855 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 BRI3BPQ8WY22 251 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 ZSCAN10Q96SZ4 725 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-213ENST00000590315 BEGAINQ9BUH8 593 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 KAT14Q9H8E8 782 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 IL17RBQ9NRM6 502 aa15.12■□□□□ 0.01
DDX39A-213ENST00000590315 PSMA5P28066 241 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms