RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 MYH8P13535 1937 aa22.41■■□□□ 1.18
POLR2E-207ENST00000590060 ZNF541Q9H0D2 1346 aa22.4■■□□□ 1.18
POLR2E-207ENST00000590060 MPHOSPH10O00566 681 aaKnown RBP22.4■■□□□ 1.18
POLR2E-207ENST00000590060 TOP1P11387 765 aaKnown RBP22.4■■□□□ 1.18
POLR2E-207ENST00000590060 CDC27P30260 824 aa22.4■■□□□ 1.18
POLR2E-207ENST00000590060 GPC2Q8N158 579 aa22.4■■□□□ 1.18
POLR2E-207ENST00000590060 ZBED3Q96IU2 234 aaPredicted RBP22.4■■□□□ 1.18
POLR2E-207ENST00000590060 DDTLA6NHG4 134 aaPredicted RBP22.39■■□□□ 1.17
POLR2E-207ENST00000590060 FMNL1O95466 1100 aaPredicted RBP22.39■■□□□ 1.17
POLR2E-207ENST00000590060 SHMT1P34896 483 aa22.39■■□□□ 1.17
POLR2E-207ENST00000590060 SLC26A6Q9BXS9 759 aa22.39■■□□□ 1.17
POLR2E-207ENST00000590060 ZSCAN16Q9H4T2 348 aaPredicted RBP22.39■■□□□ 1.17
POLR2E-207ENST00000590060 IL17RBQ9NRM6 502 aa22.39■■□□□ 1.17
POLR2E-207ENST00000590060 RBM27Q9P2N5 1060 aaKnown RBP22.39■■□□□ 1.17
POLR2E-207ENST00000590060 CNOT7Q9UIV1 285 aaKnown RBP22.39■■□□□ 1.17
POLR2E-207ENST00000590060 DICER1Q9UPY3 1922 aaKnown RBP22.38■■□□□ 1.17
POLR2E-207ENST00000590060 WNT10BO00744 389 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 XBP1P17861 261 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 PRELPP51888 382 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 TROAPQ12815 778 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 KIF4BQ2VIQ3 1234 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 CERKLQ49MI3 558 aaPredicted RBP22.38■■□□□ 1.17
POLR2E-207ENST00000590060 RCSD1Q6JBY9 416 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 CDC37L1Q7L3B6 337 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 ZFPM1Q8IX07 1006 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 ALG1Q9BT22 464 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 ANP32EQ9BTT0 268 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 RNF26Q9BY78 433 aaPredicted RBP22.38■■□□□ 1.17
POLR2E-207ENST00000590060 RNF181Q9P0P0 153 aa22.38■■□□□ 1.17
POLR2E-207ENST00000590060 DEXIO95424 95 aa22.37■■□□□ 1.17
POLR2E-207ENST00000590060 TTLL1O95922 423 aa22.37■■□□□ 1.17
POLR2E-207ENST00000590060 AKR1B1P15121 316 aa22.37■■□□□ 1.17
POLR2E-207ENST00000590060 MCTP1Q6DN14 999 aa22.37■■□□□ 1.17
POLR2E-207ENST00000590060 CEP95Q96GE4 821 aa22.37■■□□□ 1.17
POLR2E-207ENST00000590060 LMOD1P29536 600 aaPredicted RBP22.36■■□□□ 1.17
POLR2E-207ENST00000590060 NTRK3Q16288 839 aa22.36■■□□□ 1.17
POLR2E-207ENST00000590060 TMEM179Q6ZVK1 233 aa22.36■■□□□ 1.17
POLR2E-207ENST00000590060 TMTC3Q6ZXV5 915 aa22.36■■□□□ 1.17
POLR2E-207ENST00000590060 SH3BP5LQ7L8J4 393 aa22.36■■□□□ 1.17
POLR2E-207ENST00000590060 METTL16Q86W50 562 aaKnown RBP22.36■■□□□ 1.17
POLR2E-207ENST00000590060 PHKBQ93100 1093 aa22.36■■□□□ 1.17
POLR2E-207ENST00000590060 TMEM47Q9BQJ4 181 aa22.36■■□□□ 1.17
POLR2E-207ENST00000590060 LZTS2Q9BRK4 669 aa22.36■■□□□ 1.17
POLR2E-207ENST00000590060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.36■■□□□ 1.17
POLR2E-207ENST00000590060 CABP5Q9NP86 173 aa22.36■■□□□ 1.17
POLR2E-207ENST00000590060 FAM217BQ9NTX9 383 aaPredicted RBP22.36■■□□□ 1.17
POLR2E-207ENST00000590060 FOSBP53539 338 aa22.35■■□□□ 1.17
POLR2E-207ENST00000590060 GRM4Q14833 912 aa22.35■■□□□ 1.17
POLR2E-207ENST00000590060 RBM26Q5T8P6 1007 aaKnown RBP22.35■■□□□ 1.17
POLR2E-207ENST00000590060 TATDN1Q6P1N9 297 aa22.35■■□□□ 1.17
POLR2E-207ENST00000590060 MTMR4Q9NYA4 1195 aa22.35■■□□□ 1.17
POLR2E-207ENST00000590060 IGKV6D-41A0A0C4DH26 115 aa22.34■■□□□ 1.17
POLR2E-207ENST00000590060 FDPSP14324 419 aaKnown RBP22.34■■□□□ 1.17
POLR2E-207ENST00000590060 NOVP48745 357 aa22.34■■□□□ 1.17
POLR2E-207ENST00000590060 NBPF9Q3BBW0 867 aa22.34■■□□□ 1.17
POLR2E-207ENST00000590060 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
POLR2E-207ENST00000590060 HOOK2Q96ED9 719 aa22.34■■□□□ 1.17
POLR2E-207ENST00000590060 CNTNAP1P78357 1384 aa22.34■■□□□ 1.17
POLR2E-207ENST00000590060 SIPA1L1O43166 1804 aa22.34■■□□□ 1.17
POLR2E-207ENST00000590060 DTNBO60941 627 aa22.33■■□□□ 1.17
POLR2E-207ENST00000590060 YBX3P16989 372 aaKnown RBP eCLIP22.33■■□□□ 1.172e-7■■□□□ 13.6
POLR2E-207ENST00000590060 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.17
POLR2E-207ENST00000590060 KRT85P78386 507 aa22.33■■□□□ 1.17
POLR2E-207ENST00000590060 GNL2Q13823 731 aaKnown RBP22.33■■□□□ 1.17
POLR2E-207ENST00000590060 SAFBQ15424 915 aaKnown RBP eCLIP22.33■■□□□ 1.17
POLR2E-207ENST00000590060 ABCB5Q2M3G0 1257 aa22.33■■□□□ 1.17
POLR2E-207ENST00000590060 SKOR2Q2VWA4 1001 aaPredicted RBP22.33■■□□□ 1.17
POLR2E-207ENST00000590060 TBC1D10BQ4KMP7 808 aaPredicted RBP22.33■■□□□ 1.17
POLR2E-207ENST00000590060 DNAJC18Q9H819 358 aa22.33■■□□□ 1.17
POLR2E-207ENST00000590060 KANSL2Q9H9L4 492 aa22.33■■□□□ 1.17
POLR2E-207ENST00000590060 GPRC5DQ9NZD1 345 aa22.33■■□□□ 1.17
POLR2E-207ENST00000590060 TBC1D12O60347 775 aa22.32■■□□□ 1.16
POLR2E-207ENST00000590060 GRIN3BO60391 1043 aa22.32■■□□□ 1.16
POLR2E-207ENST00000590060 PPFIA3O75145 1194 aa22.32■■□□□ 1.16
POLR2E-207ENST00000590060 PARP1P09874 1014 aaKnown RBP22.32■■□□□ 1.16
POLR2E-207ENST00000590060 GPR162Q16538 588 aa22.32■■□□□ 1.16
POLR2E-207ENST00000590060 FERMT3Q86UX7 667 aa22.32■■□□□ 1.16
POLR2E-207ENST00000590060 FBXO18Q8NFZ0 1043 aa22.32■■□□□ 1.16
POLR2E-207ENST00000590060 ZC3H4Q9UPT8 1303 aaKnown RBP22.31■■□□□ 1.16
POLR2E-207ENST00000590060 PRPF3O43395 683 aaKnown RBP22.31■■□□□ 1.16
POLR2E-207ENST00000590060 ATP2B2Q01814 1243 aa22.31■■□□□ 1.16
POLR2E-207ENST00000590060 C9orf131Q5VYM1 1079 aa22.31■■□□□ 1.16
POLR2E-207ENST00000590060 CNTNAP5Q8WYK1 1306 aa22.31■■□□□ 1.16
POLR2E-207ENST00000590060 SHTN1A0MZ66 631 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 FAM196BA6NMK8 535 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 PLEKHA8P1O95397 391 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 GUCY1B3Q02153 619 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 ICA1Q05084 483 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 RESTQ13127 1097 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 RASA3Q14644 834 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 ASPRV1Q53RT3 343 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 SAMD7Q7Z3H4 446 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 BRAPQ7Z569 592 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 NBPF11Q86T75 865 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 CCDC82Q8N4S0 544 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 ZNF396Q96N95 335 aaPredicted RBP22.3■■□□□ 1.16
POLR2E-207ENST00000590060 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.3■■□□□ 1.16
POLR2E-207ENST00000590060 TMEM39BQ9GZU3 492 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 NYAP2Q9P242 653 aa22.3■■□□□ 1.16
POLR2E-207ENST00000590060 CLIP2Q9UDT6 1046 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms