RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 TRIM43BA6NCK2 446 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 SLC15A5A6NIM6 579 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 CYBAP13498 195 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 FOSL2P15408 326 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 EPHB4P54760 987 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 DYNLL1P63167 89 aaKnown RBP15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 ATP2B2Q01814 1243 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 GRB14Q14449 540 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 SLC39A5Q6ZMH5 540 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 TRIM43Q96BQ3 446 aaPredicted RBP15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 CDCA7LQ96GN5 454 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 PDLIM7Q9NR12 457 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 AKAP2Q9Y2D5 859 aa15.74■□□□□ 0.11
PRKCSH-210ENST00000589990 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
PRKCSH-210ENST00000589990 HOXC6P09630 235 aa15.73■□□□□ 0.11
PRKCSH-210ENST00000589990 GORABQ5T7V8 394 aa15.73■□□□□ 0.11
PRKCSH-210ENST00000589990 NAA16Q6N069 864 aaPredicted RBP15.73■□□□□ 0.11
PRKCSH-210ENST00000589990 FOXP4Q8IVH2 680 aaPredicted RBP15.73■□□□□ 0.11
PRKCSH-210ENST00000589990 ACER1Q8TDN7 264 aa15.73■□□□□ 0.11
PRKCSH-210ENST00000589990 FERMT2Q96AC1 680 aa15.73■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L15C9J2P7 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L13C9JLJ4 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L11C9JVI0 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L18D6R9N7 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L22D6RA61 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L17D6RBQ6 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L19D6RCP7 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L20D6RJB6 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 VCAM1P19320 739 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 COL9A1P20849 921 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 PPP4CP60510 307 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 SMAD3P84022 425 aaKnown RBP15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 SLFN5Q08AF3 891 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L24Q0WX57 530 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 PRAMEF19Q5SWL8 479 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 CATSPERGQ6ZRH7 1159 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 GTF3C2Q8WUA4 911 aaPredicted RBP15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 C12orf42Q96LP6 360 aa15.72■□□□□ 0.11
PRKCSH-210ENST00000589990 MYH1P12882 1939 aa15.71■□□□□ 0.11
PRKCSH-210ENST00000589990 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-210ENST00000589990 ADCYAP1R1P41586 468 aa15.71■□□□□ 0.11
PRKCSH-210ENST00000589990 GRIN2CQ14957 1233 aa15.71■□□□□ 0.11
PRKCSH-210ENST00000589990 SNX17Q15036 470 aa15.71■□□□□ 0.11
PRKCSH-210ENST00000589990 FEZ1Q99689 392 aa15.71■□□□□ 0.11
PRKCSH-210ENST00000589990 TRIM34Q9BYJ4 488 aa15.71■□□□□ 0.11
PRKCSH-210ENST00000589990 CHD9Q3L8U1 2897 aa15.71■□□□□ 0.11
PRKCSH-210ENST00000589990 BDP1A6H8Y1 2624 aa15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 E9PSI1 815 aa15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 ANP32CO43423 234 aa15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 MSCO60682 206 aa15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 GLRX3O76003 335 aaKnown RBP15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 BAG3O95817 575 aa15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 CYP2E1P05181 493 aaPredicted RBP15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 CCNA1P78396 465 aa15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 NOL10Q9BSC4 688 aaKnown RBP15.7■□□□□ 0.1
PRKCSH-210ENST00000589990 ZNF236Q9UL36 1845 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 PNMA6EA0A0J9YXQ4 647 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 COBLO75128 1261 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 ADORA2AP29274 412 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 EVX2Q03828 476 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 TLE2Q04725 743 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 MTX1Q13505 466 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 RAB3GAP1Q15042 981 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 RPAP3Q9H6T3 665 aaPredicted RBP15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 PIH1D3Q9NQM4 214 aaKnown RBP15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 GINM1Q9NU53 330 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 IVNS1ABPQ9Y6Y0 642 aa15.69■□□□□ 0.1
PRKCSH-210ENST00000589990 KBTBD13C9JR72 458 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 PLCG2P16885 1265 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 GUCY1A2P33402 732 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 LRRC41Q15345 812 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 TATDN1Q6P1N9 297 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 LBX2Q6XYB7 198 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 ARRDC4Q8NCT1 418 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 RNPC3Q96LT9 517 aaKnown RBP15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 MOV10L1Q9BXT6 1211 aaKnown RBP15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 KIAA1683Q9H0B3 1180 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 TNNQ9UQP3 1299 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 SMCHD1A6NHR9 2005 aa15.68■□□□□ 0.1
PRKCSH-210ENST00000589990 HLA-DOAP06340 250 aa15.67■□□□□ 0.1
PRKCSH-210ENST00000589990 UQCRFS1P1P0C7P4 283 aa15.67■□□□□ 0.1
PRKCSH-210ENST00000589990 DPP9Q86TI2 863 aa15.67■□□□□ 0.1
PRKCSH-210ENST00000589990 MIGA1Q8NAN2 632 aa15.67■□□□□ 0.1
PRKCSH-210ENST00000589990 A0A0G2JMZ2 1700 aa15.67■□□□□ 0.1
PRKCSH-210ENST00000589990 TNFRSF10AO00220 468 aa15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 SEPT4O43236 478 aa15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 ZAP70P43403 619 aa15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 TJAP1Q5JTD0 557 aa15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 KIAA1755Q5JYT7 1200 aa15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 OLFML2BQ68BL8 750 aa15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 SYMPKQ92797 1274 aaKnown RBP15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 API5Q9BZZ5 524 aaKnown RBP15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 REV3LO60673 3130 aa15.66■□□□□ 0.1
PRKCSH-210ENST00000589990 A0A1W2PRG0 241 aa15.65■□□□□ 0.1
PRKCSH-210ENST00000589990 ERCC3P19447 782 aa15.65■□□□□ 0.1
PRKCSH-210ENST00000589990 CYP7A1P22680 504 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms