RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 GPRC5AQ8NFJ5 357 aa21.83■■□□□ 1.09
H3F3B-209ENST00000589949 CRNKL1Q9BZJ0 848 aaKnown RBP21.83■■□□□ 1.09
H3F3B-209ENST00000589949 CRISPLD2Q9H0B8 497 aa21.83■■□□□ 1.09
H3F3B-209ENST00000589949 CNMDO75829 334 aa21.82■■□□□ 1.08
H3F3B-209ENST00000589949 ADD2P35612 726 aa21.82■■□□□ 1.08
H3F3B-209ENST00000589949 PDE3AQ14432 1141 aa21.82■■□□□ 1.08
H3F3B-209ENST00000589949 SEPT2Q15019 361 aa21.82■■□□□ 1.08
H3F3B-209ENST00000589949 TRIB2Q92519 343 aa21.82■■□□□ 1.08
H3F3B-209ENST00000589949 HAUS7Q99871 368 aa21.82■■□□□ 1.08
H3F3B-209ENST00000589949 KIAA1683Q9H0B3 1180 aa21.82■■□□□ 1.08
H3F3B-209ENST00000589949 MCM9Q9NXL9 1143 aa21.82■■□□□ 1.08
H3F3B-209ENST00000589949 HMGCRP04035 888 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 CYP2B6P20813 491 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 ERVK-9P63128 1117 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 ERVK-24P63145 666 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 USP6NLQ92738 828 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 DPF3Q92784 378 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 DYNLL2Q96FJ2 89 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 FEZ1Q99689 392 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 PAGR1Q9BTK6 254 aa21.81■■□□□ 1.08
H3F3B-209ENST00000589949 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.81■■□□□ 1.086e-12■■■□□ 15.4
H3F3B-209ENST00000589949 A0A1W2PRG0 241 aa21.8■■□□□ 1.08
H3F3B-209ENST00000589949 MBD4O95243 580 aa21.8■■□□□ 1.08
H3F3B-209ENST00000589949 TFRCP02786 760 aaKnown RBP21.8■■□□□ 1.08
H3F3B-209ENST00000589949 VCAM1P19320 739 aa21.8■■□□□ 1.08
H3F3B-209ENST00000589949 CYP2D7A0A087X1C5 515 aa21.79■■□□□ 1.08
H3F3B-209ENST00000589949 CATSPERGQ6ZRH7 1159 aa21.79■■□□□ 1.08
H3F3B-209ENST00000589949 DIS3LQ8TF46 1054 aaKnown RBP21.79■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L15C9J2P7 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L13C9JLJ4 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L11C9JVI0 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L18D6R9N7 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L22D6RA61 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L17D6RBQ6 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L19D6RCP7 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L20D6RJB6 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 MNX1P50219 401 aaPredicted RBP21.78■■□□□ 1.08
H3F3B-209ENST00000589949 FXR1P51114 621 aaKnown RBP eCLIP21.78■■□□□ 1.08
H3F3B-209ENST00000589949 USP17L24Q0WX57 530 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 KIAA1755Q5JYT7 1200 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 MORN1Q5T089 497 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 MAP3K21Q5TCX8 1036 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 GPR142Q7Z601 462 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 CLEC10AQ8IUN9 316 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 SIAH1Q8IUQ4 282 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 LRRCC1Q9C099 1032 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 CHMP4BQ9H444 224 aaKnown RBP21.78■■□□□ 1.08
H3F3B-209ENST00000589949 CABP5Q9NP86 173 aa21.78■■□□□ 1.08
H3F3B-209ENST00000589949 MAPK4P31152 587 aa21.77■■□□□ 1.08
H3F3B-209ENST00000589949 CCL14Q16627 93 aa21.77■■□□□ 1.08
H3F3B-209ENST00000589949 PAWRQ96IZ0 340 aaKnown RBP21.77■■□□□ 1.08
H3F3B-209ENST00000589949 NUDT12Q9BQG2 462 aa21.77■■□□□ 1.08
H3F3B-209ENST00000589949 BTBD7Q9P203 1132 aa21.77■■□□□ 1.08
H3F3B-209ENST00000589949 RPTORQ8N122 1335 aa21.77■■□□□ 1.07
H3F3B-209ENST00000589949 RANBP2P49792 3224 aaKnown RBP21.76■■□□□ 1.07
H3F3B-209ENST00000589949 XRCC5P13010 732 aaKnown RBP21.76■■□□□ 1.07
H3F3B-209ENST00000589949 USP14P54578 494 aa21.76■■□□□ 1.07
H3F3B-209ENST00000589949 HTATIP2Q9BUP3 242 aa21.76■■□□□ 1.07
H3F3B-209ENST00000589949 RPAP3Q9H6T3 665 aaPredicted RBP21.76■■□□□ 1.07
H3F3B-209ENST00000589949 RABGAP1Q9Y3P9 1069 aa21.76■■□□□ 1.07
H3F3B-209ENST00000589949 BAZ2AQ9UIF9 1905 aaKnown RBP21.75■■□□□ 1.07
H3F3B-209ENST00000589949 SPDYE16A6NNV3 312 aaPredicted RBP21.75■■□□□ 1.07
H3F3B-209ENST00000589949 MPHOSPH10O00566 681 aaKnown RBP21.75■■□□□ 1.07
H3F3B-209ENST00000589949 CHRDL2Q6WN34 429 aa21.75■■□□□ 1.07
H3F3B-209ENST00000589949 PLEKHH3Q7Z736 793 aa21.75■■□□□ 1.07
H3F3B-209ENST00000589949 GTF3C2Q8WUA4 911 aaPredicted RBP21.75■■□□□ 1.07
H3F3B-209ENST00000589949 SOCS4Q8WXH5 440 aa21.75■■□□□ 1.07
H3F3B-209ENST00000589949 PUS7LQ9H0K6 701 aaKnown RBP21.75■■□□□ 1.07
H3F3B-209ENST00000589949 HMX1Q9NP08 348 aaPredicted RBP21.75■■□□□ 1.07
H3F3B-209ENST00000589949 PRKAR2AP13861 404 aaKnown RBP21.74■■□□□ 1.07
H3F3B-209ENST00000589949 AKR1B1P15121 316 aa21.74■■□□□ 1.07
H3F3B-209ENST00000589949 UBE3CQ15386 1083 aa21.74■■□□□ 1.07
H3F3B-209ENST00000589949 C12orf60Q5U649 245 aa21.74■■□□□ 1.07
H3F3B-209ENST00000589949 TSHZ3Q63HK5 1081 aa21.74■■□□□ 1.07
H3F3B-209ENST00000589949 LBX2Q6XYB7 198 aa21.74■■□□□ 1.07
H3F3B-209ENST00000589949 DCTPP1Q9H773 170 aa21.74■■□□□ 1.07
H3F3B-209ENST00000589949 ATP8A2Q9NTI2 1148 aa21.74■■□□□ 1.07
H3F3B-209ENST00000589949 TRIOBPQ9H2D6 2365 aa21.73■■□□□ 1.07
H3F3B-209ENST00000589949 ALPK3Q96L96 1907 aa21.73■■□□□ 1.07
H3F3B-209ENST00000589949 USP17L12C9JPN9 530 aa21.73■■□□□ 1.07
H3F3B-209ENST00000589949 USP17L21D6R901 530 aa21.73■■□□□ 1.07
H3F3B-209ENST00000589949 CACNB2Q08289 660 aaPredicted RBP21.73■■□□□ 1.07
H3F3B-209ENST00000589949 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.73■■□□□ 1.071e-8■■■■■ 50
H3F3B-209ENST00000589949 PRO3102Q9H379 93 aa21.73■■□□□ 1.07
H3F3B-209ENST00000589949 RBM27Q9P2N5 1060 aaKnown RBP21.73■■□□□ 1.07
H3F3B-209ENST00000589949 TMEM179Q6ZVK1 233 aa21.72■■□□□ 1.07
H3F3B-209ENST00000589949 ECHDC1Q9NTX5 307 aa21.72■■□□□ 1.07
H3F3B-209ENST00000589949 FLRT1Q9NZU1 646 aa21.72■■□□□ 1.07
H3F3B-209ENST00000589949 RLFQ13129 1914 aa21.72■■□□□ 1.07
H3F3B-209ENST00000589949 MYH7P12883 1935 aa21.71■■□□□ 1.07
H3F3B-209ENST00000589949 ZKSCAN1P17029 563 aaPredicted RBP21.71■■□□□ 1.07
H3F3B-209ENST00000589949 CCND3P30281 292 aaPredicted RBP21.71■■□□□ 1.07
H3F3B-209ENST00000589949 CDK8P49336 464 aa21.71■■□□□ 1.07
H3F3B-209ENST00000589949 CTR9Q6PD62 1173 aa21.71■■□□□ 1.07
H3F3B-209ENST00000589949 CCAR1Q8IX12 1150 aaKnown RBP21.71■■□□□ 1.07
H3F3B-209ENST00000589949 PCDH10Q9P2E7 1040 aa21.71■■□□□ 1.07
H3F3B-209ENST00000589949 SWAP70Q9UH65 585 aa21.71■■□□□ 1.07
H3F3B-209ENST00000589949 OGDHLQ9ULD0 1010 aa21.71■■□□□ 1.07
H3F3B-209ENST00000589949 PCDHB15Q9Y5E8 787 aa21.71■■□□□ 1.07
H3F3B-209ENST00000589949 SLC4A4Q9Y6R1 1079 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms