RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TBC1D2Q9BYX2 928 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 TSPYL2Q9H2G4 693 aaPredicted RBP7.67□□□□□ -1.18
VPS25-204ENST00000589577 ZNFX1Q9P2E3 1918 aaKnown RBP7.67□□□□□ -1.18
VPS25-204ENST00000589577 SEPT4O43236 478 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 LDHBP07195 334 aaKnown RBP7.66□□□□□ -1.18
VPS25-204ENST00000589577 RHBDL3P58872 404 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 ATP2B2Q01814 1243 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 METTL24Q5JXM2 366 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 ANKRD33Q7Z3H0 272 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 HERVK_113Q902F9 699 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 ANKS1AQ92625 1134 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 SUCLG2Q96I99 432 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 WDR18Q9BV38 432 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS25-204ENST00000589577 TMEM39AQ9NV64 488 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 TBX21Q9UL17 535 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 SALL1Q9NSC2 1324 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 VPS13AQ96RL7 3174 aa7.66□□□□□ -1.18
VPS25-204ENST00000589577 A0A1W2PQ45 241 aaPredicted RBP7.65□□□□□ -1.18
VPS25-204ENST00000589577 A0A1W2PQY0 241 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 TIMP1P01033 207 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 CSF2RAP15509 400 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 RALBP1Q15311 655 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 PUM3Q15397 648 aaKnown RBP7.65□□□□□ -1.18
VPS25-204ENST00000589577 RAB30Q15771 203 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 PARP14Q460N5 1801 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 PRAMEF19Q5SWL8 479 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 OLFML2BQ68BL8 750 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 KRT40Q6A162 431 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 MFSD5Q6N075 450 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 ZNF365Q70YC5 407 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 CCAR1Q8IX12 1150 aaKnown RBP7.65□□□□□ -1.18
VPS25-204ENST00000589577 SLC44A5Q8NCS7 719 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 KLHDC4Q8TBB5 520 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 ZNF384Q8TF68 577 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 CHMP4AQ9BY43 222 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 SLC28A3Q9HAS3 691 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 MTCH2Q9Y6C9 303 aa7.65□□□□□ -1.18
VPS25-204ENST00000589577 ZFHX4Q86UP3 3567 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 EPOPA6NHQ4 379 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 RFXAPO00287 272 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 ACRP10323 421 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 MYOGP15173 224 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 POU3F3P20264 500 aaPredicted RBP7.64□□□□□ -1.19
VPS25-204ENST00000589577 BTDP43251 543 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 SKIV2LQ15477 1246 aaKnown RBP7.64□□□□□ -1.19
VPS25-204ENST00000589577 TWISTNBQ3B726 338 aaPredicted RBP7.64□□□□□ -1.19
VPS25-204ENST00000589577 RABL6Q3YEC7 729 aaPredicted RBP7.64□□□□□ -1.19
VPS25-204ENST00000589577 ANKRD44Q8N8A2 993 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 GTF3C2Q8WUA4 911 aaPredicted RBP7.64□□□□□ -1.19
VPS25-204ENST00000589577 TOX2Q96NM4 488 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 DNAJC18Q9H819 358 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 AS3MTQ9HBK9 375 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 EMILIN3Q9NT22 766 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 TMOD4Q9NZQ9 345 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 BTBD7Q9P203 1132 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 MSRAQ9UJ68 235 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 COG5Q9UP83 839 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 RABGAP1Q9Y3P9 1069 aa7.64□□□□□ -1.19
VPS25-204ENST00000589577 ZFHX2Q9C0A1 2572 aaPredicted RBP7.64□□□□□ -1.19
VPS25-204ENST00000589577 DMDP11532 3685 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 ROBO3Q96MS0 1386 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 KMT2BQ9UMN6 2715 aaPredicted RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 ZNF521Q96K83 1311 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 PTPRSQ13332 1948 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 C19orf81C9J6K1 198 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 APAF1O14727 1248 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 COBLO75128 1261 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 NPM3O75607 178 aaKnown RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 GLRX3O76003 335 aaKnown RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 PGK1P00558 417 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 IFIT1P09914 478 aaKnown RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 NBPF7P0C2Y1 421 aaPredicted RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 RABGGTBP53611 331 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 CALD1Q05682 793 aaKnown RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 PPIGQ13427 754 aaKnown RBP eCLIP7.63□□□□□ -1.192e-12■■□□□ 12.1
VPS25-204ENST00000589577 WDR78Q5VTH9 848 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 LENG1Q96BZ8 264 aaPredicted RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 FAM163AQ96GL9 167 aaPredicted RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 BICC1Q9H694 974 aaKnown RBP7.63□□□□□ -1.19
VPS25-204ENST00000589577 XPNPEP3Q9NQH7 507 aa7.63□□□□□ -1.19
VPS25-204ENST00000589577 COL11A1P12107 1806 aaPredicted RBP7.62□□□□□ -1.19
VPS25-204ENST00000589577 MROH7-TTC4A0A0A0MT08 1334 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 USP17L10C9JJH3 530 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 ADORA2AP29274 412 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 CCNA1P78396 465 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 NCBP3Q53F19 620 aaKnown RBP7.62□□□□□ -1.19
VPS25-204ENST00000589577 PPP2R2DQ66LE6 453 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 PSRC1Q6PGN9 363 aaPredicted RBP7.62□□□□□ -1.19
VPS25-204ENST00000589577 LBX2Q6XYB7 198 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 UIMC1Q96RL1 719 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 KCNH6Q9H252 994 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 CWC22Q9HCG8 908 aaKnown RBP7.62□□□□□ -1.19
VPS25-204ENST00000589577 CACNA1BQ00975 2339 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 DMXL1Q9Y485 3027 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 KMT2EQ8IZD2 1858 aa7.62□□□□□ -1.19
VPS25-204ENST00000589577 WDR87Q6ZQQ6 2873 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 SCN5AQ14524 2016 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 GPR75-ASB3A0A0A6YYF3 556 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms