RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 ZNF444Q8N0Y2 327 aaPredicted RBP25.13■■□□□ 1.61
R3HDM4-204ENST00000589428 NBPF3Q9H094 633 aa25.13■■□□□ 1.61
R3HDM4-204ENST00000589428 ZNF213O14771 459 aa25.12■■□□□ 1.61
R3HDM4-204ENST00000589428 SPP2Q13103 211 aa25.12■■□□□ 1.61
R3HDM4-204ENST00000589428 ADCK5Q3MIX3 580 aa25.12■■□□□ 1.61
R3HDM4-204ENST00000589428 WDR18Q9BV38 432 aa25.12■■□□□ 1.61
R3HDM4-204ENST00000589428 SEPT2Q15019 361 aa25.12■■□□□ 1.61
R3HDM4-204ENST00000589428 BRI3BPQ8WY22 251 aa25.12■■□□□ 1.61
R3HDM4-204ENST00000589428 TESPA1A2RU30 521 aaPredicted RBP25.11■■□□□ 1.61
R3HDM4-204ENST00000589428 OTUD7BQ6GQQ9 843 aa25.11■■□□□ 1.61
R3HDM4-204ENST00000589428 STOX1Q6ZVD7 989 aa25.11■■□□□ 1.61
R3HDM4-204ENST00000589428 WBP1LQ9NX94 342 aa25.11■■□□□ 1.61
R3HDM4-204ENST00000589428 A0A0G2JLL6 359 aaPredicted RBP25.1■■□□□ 1.61
R3HDM4-204ENST00000589428 PRRT2Q7Z6L0 340 aaPredicted RBP25.1■■□□□ 1.61
R3HDM4-204ENST00000589428 TBC1D10CQ8IV04 446 aa25.1■■□□□ 1.61
R3HDM4-204ENST00000589428 RNF41Q9H4P4 317 aaPredicted RBP25.1■■□□□ 1.61
R3HDM4-204ENST00000589428 TOMM22Q9NS69 142 aa25.1■■□□□ 1.61
R3HDM4-204ENST00000589428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.1■■□□□ 1.614e-7■■□□□ 13.8
R3HDM4-204ENST00000589428 PCP11498 1178 aaKnown RBP25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 GUCY1A2P33402 732 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 RABEP1Q15276 862 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 IFNL1Q8IU54 200 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 JAKMIP1Q96N16 626 aaKnown RBP25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 FEZ1Q99689 392 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 CA12O43570 354 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 TSPY3P0CV98 308 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 TSPY8P0CW00 308 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 ICA1Q05084 483 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 MTMR2Q13614 643 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 MFSD6Q6ZSS7 791 aa25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 FASTKD5Q7L8L6 764 aaKnown RBP25.09■■□□□ 1.61
R3HDM4-204ENST00000589428 PTPRFP10586 1907 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 USP17L10C9JJH3 530 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 E7EWF7 191 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 IGF2BP3O00425 579 aaKnown RBP eCLIP25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 ORC4O43929 436 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 ALDH1A1P00352 501 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 HSPA1AP0DMV8 641 aaKnown RBP25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 HSPA1BP0DMV9 641 aaKnown RBP25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 BACE1P56817 501 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 COL9A3Q14050 684 aaPredicted RBP25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 KRT32Q14532 448 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 AKNAD1Q5T1N1 836 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 GADL1Q6ZQY3 521 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 STAG1Q8WVM7 1258 aa25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 UPF3BQ9BZI7 483 aaKnown RBP25.08■■□□□ 1.61
R3HDM4-204ENST00000589428 ANP32AP39687 249 aaKnown RBP25.07■■□□□ 1.6
R3HDM4-204ENST00000589428 HMGCS2P54868 508 aa25.07■■□□□ 1.6
R3HDM4-204ENST00000589428 TM6SF1Q9BZW5 370 aa25.07■■□□□ 1.6
R3HDM4-204ENST00000589428 KANSL2Q9H9L4 492 aa25.07■■□□□ 1.6
R3HDM4-204ENST00000589428 RANBP6O60518 1105 aaKnown RBP25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 FGRP09769 529 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 CASTP20810 708 aaKnown RBP25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 RRP12Q5JTH9 1297 aaKnown RBP25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 PTPN18Q99952 460 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 ARHGEF10LQ9HCE6 1279 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 RNF186Q9NXI6 227 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 SAGE1Q9NXZ1 904 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 TMOD4Q9NZQ9 345 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 GREB1LQ9C091 1923 aaPredicted RBP25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 PLIN4Q96Q06 1357 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 TSPY2A6NKD2 308 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 C19orf81C9J6K1 198 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 FAM47AQ5JRC9 791 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 CLEC10AQ8IUN9 316 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 SH2D4AQ9H788 454 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 INCENPQ9NQS7 918 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 TACC3Q9Y6A5 838 aa25.06■■□□□ 1.6
R3HDM4-204ENST00000589428 BTBD19C9JJ37 291 aa25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 TRPA1O75762 1119 aa25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 CPA1P15085 419 aa25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 USP14P54578 494 aa25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 TFAP4Q01664 338 aa25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 SH3D19Q5HYK7 790 aa25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 ANKRD23Q86SG2 305 aa25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 PROCA1Q8NCQ7 364 aaPredicted RBP25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 ZSWIM6Q9HCJ5 1215 aa25.05■■□□□ 1.6
R3HDM4-204ENST00000589428 LOC285556D6RIA3 1793 aa25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 ATP2B2Q01814 1243 aa25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 MOGSQ13724 837 aa25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 FAM43AQ8N2R8 423 aa25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 NEDD1Q8NHV4 660 aa25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 ACER1Q8TDN7 264 aa25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 ZCCHC17Q9NP64 241 aaKnown RBP25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 NEDD4P46934 1319 aa25.04■■□□□ 1.6
R3HDM4-204ENST00000589428 PSMA5P28066 241 aa25.03■■□□□ 1.6
R3HDM4-204ENST00000589428 ZYXQ15942 572 aaKnown RBP25.03■■□□□ 1.6
R3HDM4-204ENST00000589428 USP17L2Q6R6M4 530 aa25.03■■□□□ 1.6
R3HDM4-204ENST00000589428 NEK1Q96PY6 1258 aa25.03■■□□□ 1.6
R3HDM4-204ENST00000589428 KIAA1683Q9H0B3 1180 aa25.03■■□□□ 1.6
R3HDM4-204ENST00000589428 NEK4P51957 841 aa25.03■■□□□ 1.6
R3HDM4-204ENST00000589428 AGTPBP1Q9UPW5 1226 aa25.03■■□□□ 1.6
R3HDM4-204ENST00000589428 EEF2P13639 858 aaKnown RBP25.02■■□□□ 1.6
R3HDM4-204ENST00000589428 NT5C2P49902 561 aa25.02■■□□□ 1.6
R3HDM4-204ENST00000589428 ESR2Q92731 530 aa25.02■■□□□ 1.6
R3HDM4-204ENST00000589428 IGKV6D-41A0A0C4DH26 115 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 PDHXO00330 501 aa25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 CD2BP2O95400 341 aaKnown RBP25.01■■□□□ 1.59
R3HDM4-204ENST00000589428 DGKZQ13574 1117 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms