RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 ATAD5Q96QE3 1844 aa20.98■□□□□ 0.95
H3F3B-207ENST00000589417 GNRH1P01148 92 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 CAP1Q01518 475 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 NMIQ13287 307 aaPredicted RBP20.97■□□□□ 0.95
H3F3B-207ENST00000589417 TTC22Q5TAA0 569 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 FBXO46Q6PJ61 603 aaPredicted RBP20.97■□□□□ 0.95
H3F3B-207ENST00000589417 CCDC129Q6ZRS4 1044 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 SIAH1Q8IUQ4 282 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 ACER1Q8TDN7 264 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 NAPBQ9H115 298 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 EFCC1Q9HA90 598 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 CPA4Q9UI42 421 aa20.97■□□□□ 0.95
H3F3B-207ENST00000589417 LOC285556D6RIA3 1793 aa20.96■□□□□ 0.95
H3F3B-207ENST00000589417 MINDY4BA8MYZ0 360 aa20.96■□□□□ 0.95
H3F3B-207ENST00000589417 RASA1P20936 1047 aa20.96■□□□□ 0.95
H3F3B-207ENST00000589417 OSBPP22059 807 aa20.96■□□□□ 0.95
H3F3B-207ENST00000589417 GCLCP48506 637 aaPredicted RBP20.96■□□□□ 0.95
H3F3B-207ENST00000589417 CENPQQ7L2Z9 268 aaPredicted RBP20.96■□□□□ 0.95
H3F3B-207ENST00000589417 ASCC2Q9H1I8 757 aaPredicted RBP20.96■□□□□ 0.95
H3F3B-207ENST00000589417 KANSL2Q9H9L4 492 aa20.96■□□□□ 0.95
H3F3B-207ENST00000589417 ANAPC4Q9UJX5 808 aa20.96■□□□□ 0.95
H3F3B-207ENST00000589417 ZMYM6O95789 1325 aa20.96■□□□□ 0.95
H3F3B-207ENST00000589417 A0A1W2PRG0 241 aa20.95■□□□□ 0.94
H3F3B-207ENST00000589417 MPHOSPH10O00566 681 aaKnown RBP20.95■□□□□ 0.94
H3F3B-207ENST00000589417 GSPT1P15170 499 aaKnown RBP20.95■□□□□ 0.94
H3F3B-207ENST00000589417 VPS53Q5VIR6 699 aa20.95■□□□□ 0.94
H3F3B-207ENST00000589417 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.95■□□□□ 0.94
H3F3B-207ENST00000589417 TMX2Q9Y320 296 aa20.95■□□□□ 0.94
H3F3B-207ENST00000589417 TRIM17Q9Y577 477 aa20.95■□□□□ 0.94
H3F3B-207ENST00000589417 BAZ2AQ9UIF9 1905 aaKnown RBP20.95■□□□□ 0.94
H3F3B-207ENST00000589417 HSPD1P10809 573 aaKnown RBP20.94■□□□□ 0.94
H3F3B-207ENST00000589417 MFAP1P55081 439 aaKnown RBP20.94■□□□□ 0.94
H3F3B-207ENST00000589417 PPARAQ07869 468 aa20.94■□□□□ 0.94
H3F3B-207ENST00000589417 KIF22Q14807 665 aa20.94■□□□□ 0.94
H3F3B-207ENST00000589417 ZNF589Q86UQ0 364 aaPredicted RBP20.94■□□□□ 0.94
H3F3B-207ENST00000589417 SMCR8Q8TEV9 937 aaPredicted RBP20.94■□□□□ 0.94
H3F3B-207ENST00000589417 MKNK2Q9HBH9 465 aa20.94■□□□□ 0.94
H3F3B-207ENST00000589417 PTPN22Q9Y2R2 807 aa20.94■□□□□ 0.94
H3F3B-207ENST00000589417 CCDC171Q6TFL3 1326 aa20.94■□□□□ 0.94
H3F3B-207ENST00000589417 FGAP02671 866 aa20.93■□□□□ 0.94
H3F3B-207ENST00000589417 SLC3A2P08195 630 aaKnown RBP20.93■□□□□ 0.94
H3F3B-207ENST00000589417 FGRP09769 529 aa20.93■□□□□ 0.94
H3F3B-207ENST00000589417 PRMT2P55345 433 aa20.93■□□□□ 0.94
H3F3B-207ENST00000589417 FAM110CQ1W6H9 321 aa20.93■□□□□ 0.94
H3F3B-207ENST00000589417 FEZ1Q99689 392 aa20.93■□□□□ 0.94
H3F3B-207ENST00000589417 MORF4L1Q9UBU8 362 aa20.93■□□□□ 0.94
H3F3B-207ENST00000589417 IGKV6D-41A0A0C4DH26 115 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L15C9J2P7 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L13C9JLJ4 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L11C9JVI0 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L18D6R9N7 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L22D6RA61 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L17D6RBQ6 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L19D6RCP7 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L20D6RJB6 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 VCAM1P19320 739 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 CTGFP29279 349 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 ICA1Q05084 483 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 PDE4BQ07343 736 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 USP17L24Q0WX57 530 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 CATSPERGQ6ZRH7 1159 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 GTF3C2Q8WUA4 911 aaPredicted RBP20.92■□□□□ 0.94
H3F3B-207ENST00000589417 LPAR1Q92633 364 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 P2RX7Q99572 595 aaKnown RBP20.92■□□□□ 0.94
H3F3B-207ENST00000589417 SH2D4AQ9H788 454 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 ARHGEF10LQ9HCE6 1279 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 DIAPH3Q9NSV4 1193 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 HPS5Q9UPZ3 1129 aa20.92■□□□□ 0.94
H3F3B-207ENST00000589417 IRX3P78415 501 aaPredicted RBP20.91■□□□□ 0.94
H3F3B-207ENST00000589417 LBX2Q6XYB7 198 aa20.91■□□□□ 0.94
H3F3B-207ENST00000589417 ZNF444Q8N0Y2 327 aaPredicted RBP20.91■□□□□ 0.94
H3F3B-207ENST00000589417 ARHGAP39Q9C0H5 1083 aa20.91■□□□□ 0.94
H3F3B-207ENST00000589417 NYAP2Q9P242 653 aa20.91■□□□□ 0.94
H3F3B-207ENST00000589417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.91■□□□□ 0.94
H3F3B-207ENST00000589417 PSMC4P43686 418 aa20.9■□□□□ 0.94
H3F3B-207ENST00000589417 HERVK_113P62684 666 aa20.9■□□□□ 0.94
H3F3B-207ENST00000589417 CWC27Q6UX04 472 aaKnown RBP20.9■□□□□ 0.94
H3F3B-207ENST00000589417 NEDD1Q8NHV4 660 aa20.9■□□□□ 0.94
H3F3B-207ENST00000589417 TRIM47Q96LD4 638 aa20.9■□□□□ 0.94
H3F3B-207ENST00000589417 SYNPO2Q9UMS6 1093 aa20.9■□□□□ 0.94
H3F3B-207ENST00000589417 PLIN4Q96Q06 1357 aa20.89■□□□□ 0.93
H3F3B-207ENST00000589417 EEF2P13639 858 aaKnown RBP20.89■□□□□ 0.93
H3F3B-207ENST00000589417 HOXD10P28358 340 aa20.89■□□□□ 0.93
H3F3B-207ENST00000589417 ANKRD13CQ8N6S4 541 aa20.89■□□□□ 0.93
H3F3B-207ENST00000589417 MKL1Q969V6 931 aa20.89■□□□□ 0.93
H3F3B-207ENST00000589417 VCPKMTQ9H867 229 aa20.89■□□□□ 0.93
H3F3B-207ENST00000589417 HTTP42858 3142 aa20.89■□□□□ 0.93
H3F3B-207ENST00000589417 ORC4O43929 436 aa20.88■□□□□ 0.93
H3F3B-207ENST00000589417 FCGRTP55899 365 aa20.88■□□□□ 0.93
H3F3B-207ENST00000589417 ZYXQ15942 572 aaKnown RBP20.88■□□□□ 0.93
H3F3B-207ENST00000589417 POTEEQ6S8J3 1075 aa20.88■□□□□ 0.93
H3F3B-207ENST00000589417 CLEC10AQ8IUN9 316 aa20.88■□□□□ 0.93
H3F3B-207ENST00000589417 DSCC1Q9BVC3 393 aa20.88■□□□□ 0.93
H3F3B-207ENST00000589417 RBPJLQ9UBG7 517 aa20.88■□□□□ 0.93
H3F3B-207ENST00000589417 SRRDQ9UH36 339 aa20.88■□□□□ 0.93
H3F3B-207ENST00000589417 PRDM1O75626 825 aa20.87■□□□□ 0.93
H3F3B-207ENST00000589417 PCP11498 1178 aaKnown RBP20.87■□□□□ 0.93
H3F3B-207ENST00000589417 KIAA1755Q5JYT7 1200 aa20.87■□□□□ 0.93
H3F3B-207ENST00000589417 RPAP3Q9H6T3 665 aaPredicted RBP20.87■□□□□ 0.93
H3F3B-207ENST00000589417 MTMR4Q9NYA4 1195 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms