RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 ERVK-9P63128 1117 aa25.91■■□□□ 1.74
NEDD4L-225ENST00000589054 ERVK-24P63145 666 aa25.91■■□□□ 1.74
NEDD4L-225ENST00000589054 ABCB5Q2M3G0 1257 aa25.91■■□□□ 1.74
NEDD4L-225ENST00000589054 TTC6Q86TZ1 520 aa25.91■■□□□ 1.74
NEDD4L-225ENST00000589054 CERS3Q8IU89 383 aa25.91■■□□□ 1.74
NEDD4L-225ENST00000589054 PAGR1Q9BTK6 254 aa25.91■■□□□ 1.74
NEDD4L-225ENST00000589054 TTF1Q15361 905 aaPredicted RBP25.9■■□□□ 1.74
NEDD4L-225ENST00000589054 HTATIP2Q9BUP3 242 aa25.9■■□□□ 1.74
NEDD4L-225ENST00000589054 DDX60LQ5H9U9 1706 aaKnown RBP25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 A0A1W2PRG0 241 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 PRKAB2O43741 272 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 IFIT2P09913 472 aaKnown RBP25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 MS4A1P11836 297 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 SEPT2Q15019 361 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 CCL14Q16627 93 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 MAP3K21Q5TCX8 1036 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 TMED8Q6PL24 325 aaPredicted RBP25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 CATSPERGQ6ZRH7 1159 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 SLC44A5Q8NCS7 719 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 KIAA1683Q9H0B3 1180 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 BOLA2Q9H3K6 86 aa25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 DCP1AQ9NPI6 582 aaPredicted RBP25.89■■□□□ 1.74
NEDD4L-225ENST00000589054 RPTORQ8N122 1335 aa25.88■■□□□ 1.73
NEDD4L-225ENST00000589054 POLR3DP05423 398 aaPredicted RBP25.88■■□□□ 1.73
NEDD4L-225ENST00000589054 VCAM1P19320 739 aa25.88■■□□□ 1.73
NEDD4L-225ENST00000589054 MORN1Q5T089 497 aa25.88■■□□□ 1.73
NEDD4L-225ENST00000589054 GPR142Q7Z601 462 aa25.88■■□□□ 1.73
NEDD4L-225ENST00000589054 ARMT1Q9H993 441 aa25.88■■□□□ 1.73
NEDD4L-225ENST00000589054 MCM9Q9NXL9 1143 aa25.88■■□□□ 1.73
NEDD4L-225ENST00000589054 RCAN3Q9UKA8 241 aa25.88■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L15C9J2P7 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L13C9JLJ4 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L11C9JVI0 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L18D6R9N7 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L22D6RA61 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L17D6RBQ6 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L19D6RCP7 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L20D6RJB6 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 USP17L24Q0WX57 530 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 KIAA1755Q5JYT7 1200 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 DYNLL2Q96FJ2 89 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 FEZ1Q99689 392 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 NUDT12Q9BQG2 462 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 CRNKL1Q9BZJ0 848 aaKnown RBP25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 HMX1Q9NP08 348 aaPredicted RBP25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 BTBD7Q9P203 1132 aa25.87■■□□□ 1.73
NEDD4L-225ENST00000589054 SMARCA5O60264 1052 aaPredicted RBP25.86■■□□□ 1.73
NEDD4L-225ENST00000589054 RAB11FIP3O75154 756 aa25.86■■□□□ 1.73
NEDD4L-225ENST00000589054 HMMRO75330 724 aa25.86■■□□□ 1.73
NEDD4L-225ENST00000589054 XRCC5P13010 732 aaKnown RBP25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 PRKAR2AP13861 404 aaKnown RBP25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 ATP5JP18859 108 aa25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 MAPK4P31152 587 aa25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 ADD2P35612 726 aa25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 CACNB2Q08289 660 aaPredicted RBP25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 PLEKHH3Q7Z736 793 aa25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 SIAH1Q8IUQ4 282 aa25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 PAG1Q9NWQ8 432 aa25.85■■□□□ 1.73
NEDD4L-225ENST00000589054 CYP2D7A0A087X1C5 515 aa25.84■■□□□ 1.73
NEDD4L-225ENST00000589054 CLEC10AQ8IUN9 316 aa25.84■■□□□ 1.73
NEDD4L-225ENST00000589054 CABP5Q9NP86 173 aa25.84■■□□□ 1.73
NEDD4L-225ENST00000589054 RABGAP1Q9Y3P9 1069 aa25.84■■□□□ 1.73
NEDD4L-225ENST00000589054 USP14P54578 494 aa25.83■■□□□ 1.73
NEDD4L-225ENST00000589054 SOCS4Q8WXH5 440 aa25.83■■□□□ 1.73
NEDD4L-225ENST00000589054 HAUS7Q99871 368 aa25.83■■□□□ 1.73
NEDD4L-225ENST00000589054 RPAP3Q9H6T3 665 aaPredicted RBP25.83■■□□□ 1.73
NEDD4L-225ENST00000589054 FLRT1Q9NZU1 646 aa25.83■■□□□ 1.73
NEDD4L-225ENST00000589054 OGDHLQ9ULD0 1010 aa25.83■■□□□ 1.73
NEDD4L-225ENST00000589054 SPDYE16A6NNV3 312 aaPredicted RBP25.82■■□□□ 1.72
NEDD4L-225ENST00000589054 EVI5O60447 810 aa25.82■■□□□ 1.72
NEDD4L-225ENST00000589054 MBD4O95243 580 aa25.82■■□□□ 1.72
NEDD4L-225ENST00000589054 CCND3P30281 292 aaPredicted RBP25.82■■□□□ 1.72
NEDD4L-225ENST00000589054 NECAB2Q7Z6G3 386 aa25.82■■□□□ 1.72
NEDD4L-225ENST00000589054 NR2E3Q9Y5X4 410 aa25.82■■□□□ 1.72
NEDD4L-225ENST00000589054 LBX2Q6XYB7 198 aa25.81■■□□□ 1.72
NEDD4L-225ENST00000589054 GTF3C2Q8WUA4 911 aaPredicted RBP25.81■■□□□ 1.72
NEDD4L-225ENST00000589054 ALPK3Q96L96 1907 aa25.8■■□□□ 1.72
NEDD4L-225ENST00000589054 MPHOSPH10O00566 681 aaKnown RBP25.8■■□□□ 1.72
NEDD4L-225ENST00000589054 AKR1B1P15121 316 aa25.8■■□□□ 1.72
NEDD4L-225ENST00000589054 CAPN2P17655 700 aa25.8■■□□□ 1.72
NEDD4L-225ENST00000589054 PDE3AQ14432 1141 aa25.8■■□□□ 1.72
NEDD4L-225ENST00000589054 LHX8Q68G74 356 aa25.8■■□□□ 1.72
NEDD4L-225ENST00000589054 ANKLE1Q8NAG6 615 aa25.8■■□□□ 1.72
NEDD4L-225ENST00000589054 NAV1Q8NEY1 1877 aa25.8■■□□□ 1.72
NEDD4L-225ENST00000589054 ZKSCAN1P17029 563 aaPredicted RBP25.79■■□□□ 1.72
NEDD4L-225ENST00000589054 RGS2P41220 211 aa25.79■■□□□ 1.72
NEDD4L-225ENST00000589054 MAP2K5Q13163 448 aa25.79■■□□□ 1.72
NEDD4L-225ENST00000589054 STAP2Q9UGK3 403 aa25.79■■□□□ 1.72
NEDD4L-225ENST00000589054 PFASO15067 1338 aa25.79■■□□□ 1.72
NEDD4L-225ENST00000589054 PTPREP23469 700 aa25.78■■□□□ 1.72
NEDD4L-225ENST00000589054 CCAR1Q8IX12 1150 aaKnown RBP25.78■■□□□ 1.72
NEDD4L-225ENST00000589054 NPLOC4Q8TAT6 608 aa25.78■■□□□ 1.72
NEDD4L-225ENST00000589054 APBA2Q99767 749 aa25.78■■□□□ 1.72
NEDD4L-225ENST00000589054 PUS7LQ9H0K6 701 aaKnown RBP25.78■■□□□ 1.72
NEDD4L-225ENST00000589054 LAMA3Q16787 3333 aa25.77■■□□□ 1.72
NEDD4L-225ENST00000589054 C12orf60Q5U649 245 aa25.77■■□□□ 1.72
NEDD4L-225ENST00000589054 NBPF3Q9H094 633 aa25.77■■□□□ 1.72
NEDD4L-225ENST00000589054 USP17L12C9JPN9 530 aa25.76■■□□□ 1.71
NEDD4L-225ENST00000589054 USP17L21D6R901 530 aa25.76■■□□□ 1.71
NEDD4L-225ENST00000589054 IGHA2P01877 340 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms