RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SH3RF3Q8TEJ3 882 aaPredicted RBP17.56■□□□□ 0.4
MBD1-217ENST00000588937 PIBF1Q8WXW3 757 aa17.56■□□□□ 0.4
MBD1-217ENST00000588937 PHF20Q9BVI0 1012 aa17.56■□□□□ 0.4
MBD1-217ENST00000588937 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
MBD1-217ENST00000588937 FAM13BQ9NYF5 915 aa17.56■□□□□ 0.4
MBD1-217ENST00000588937 PLEKHA8P1O95397 391 aa17.55■□□□□ 0.4
MBD1-217ENST00000588937 BMP15O95972 392 aa17.55■□□□□ 0.4
MBD1-217ENST00000588937 TOB1P50616 345 aaPredicted RBP17.55■□□□□ 0.4
MBD1-217ENST00000588937 ZNF579Q8NAF0 562 aaKnown RBP17.55■□□□□ 0.4
MBD1-217ENST00000588937 SPC24Q8NBT2 197 aa17.55■□□□□ 0.4
MBD1-217ENST00000588937 ANKS1AQ92625 1134 aa17.55■□□□□ 0.4
MBD1-217ENST00000588937 TTC12Q9H892 705 aaPredicted RBP17.55■□□□□ 0.4
MBD1-217ENST00000588937 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
MBD1-217ENST00000588937 MKNK2Q9HBH9 465 aa17.55■□□□□ 0.4
MBD1-217ENST00000588937 STK32BQ9NY57 414 aa17.55■□□□□ 0.4
MBD1-217ENST00000588937 V9GY48 417 aaPredicted RBP17.55■□□□□ 0.4
MBD1-217ENST00000588937 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
MBD1-217ENST00000588937 PTPREP23469 700 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 TPM4P67936 248 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 TFAP4Q01664 338 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 DHX40Q8IX18 779 aaKnown RBP17.54■□□□□ 0.4
MBD1-217ENST00000588937 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 TBC1D16Q8TBP0 767 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 TCP11L1Q9NUJ3 509 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 VPS54Q9P1Q0 977 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 ANKRD31Q8N7Z5 1873 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 CNTNAP5Q8WYK1 1306 aa17.54■□□□□ 0.4
MBD1-217ENST00000588937 SMTNL1A8MU46 457 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 TERF1P54274 439 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 NR5A1Q13285 461 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 DIXDC1Q155Q3 683 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 ZNF444Q8N0Y2 327 aaPredicted RBP17.53■□□□□ 0.4
MBD1-217ENST00000588937 TGFBRAP1Q8WUH2 860 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 FAM163AQ96GL9 167 aaPredicted RBP17.53■□□□□ 0.4
MBD1-217ENST00000588937 MRFAP1L1Q96HT8 127 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 ZNF830Q96NB3 372 aaPredicted RBP17.53■□□□□ 0.4
MBD1-217ENST00000588937 GPR101Q96P66 508 aaPredicted RBP17.53■□□□□ 0.4
MBD1-217ENST00000588937 RTFDC1Q9BY42 306 aaPredicted RBP17.53■□□□□ 0.4
MBD1-217ENST00000588937 KCNH3Q9ULD8 1083 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 GNAQP50148 359 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 MPNDQ8N594 471 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 CABP5Q9NP86 173 aa17.53■□□□□ 0.4
MBD1-217ENST00000588937 SRPRBQ9Y5M8 271 aaKnown RBP17.53■□□□□ 0.4
MBD1-217ENST00000588937 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.52■□□□□ 0.4
MBD1-217ENST00000588937 TRIM75PA6NK02 468 aa17.52■□□□□ 0.4
MBD1-217ENST00000588937 C6orf229H3BNL8 230 aa17.52■□□□□ 0.4
MBD1-217ENST00000588937 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
MBD1-217ENST00000588937 NMT2O60551 498 aa17.52■□□□□ 0.4
MBD1-217ENST00000588937 BTDP43251 543 aa17.52■□□□□ 0.4
MBD1-217ENST00000588937 EVX2Q03828 476 aa17.52■□□□□ 0.4
MBD1-217ENST00000588937 SRBD1Q8N5C6 995 aaKnown RBP17.52■□□□□ 0.4
MBD1-217ENST00000588937 CNNM3Q8NE01 707 aa17.52■□□□□ 0.4
MBD1-217ENST00000588937 OXER1Q8TDS5 423 aa17.52■□□□□ 0.4
MBD1-217ENST00000588937 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
MBD1-217ENST00000588937 FBXO2Q9UK22 296 aaPredicted RBP17.52■□□□□ 0.4
MBD1-217ENST00000588937 FAM205AQ6ZU69 1335 aa17.52■□□□□ 0.39
MBD1-217ENST00000588937 TSPY3P0CV98 308 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 TSPY8P0CW00 308 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 SCG2P13521 617 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 GRIK5Q16478 980 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 MFSD14BQ5SR56 506 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 RCSD1Q6JBY9 416 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 KRBA2Q6ZNG9 492 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 AOPEPQ8N6M6 819 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
MBD1-217ENST00000588937 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
MBD1-217ENST00000588937 CLIP2Q9UDT6 1046 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 POLLQ9UGP5 575 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 PCDHB6Q9Y5E3 794 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 LTBP1Q14766 1721 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 NOLC1Q14978 699 aaKnown RBP eCLIP17.51■□□□□ 0.39
MBD1-217ENST00000588937 PFKFB3Q16875 520 aaPredicted RBP17.51■□□□□ 0.39
MBD1-217ENST00000588937 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 SLC51AQ86UW1 340 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 CCDC34Q96HJ3 373 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 SUGT1Q9Y2Z0 365 aa17.51■□□□□ 0.39
MBD1-217ENST00000588937 DPCR1Q3MIW9 517 aa17.5■□□□□ 0.39
MBD1-217ENST00000588937 KANK3Q6NY19 840 aa17.5■□□□□ 0.39
MBD1-217ENST00000588937 TEX11Q8IYF3 940 aa17.5■□□□□ 0.39
MBD1-217ENST00000588937 PNMA1Q8ND90 353 aa17.5■□□□□ 0.39
MBD1-217ENST00000588937 DYNLL2Q96FJ2 89 aa17.5■□□□□ 0.39
MBD1-217ENST00000588937 COA1Q9GZY4 146 aa17.5■□□□□ 0.39
MBD1-217ENST00000588937 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
MBD1-217ENST00000588937 CDK5RAP2Q96SN8 1893 aa17.5■□□□□ 0.39
MBD1-217ENST00000588937 NPR1P16066 1061 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 CALML3P27482 149 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 ALDH1B1P30837 517 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 CCDC186Q7Z3E2 898 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 MAPKAPK5Q8IW41 473 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 SH3GLB2Q9NR46 395 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 IL17RBQ9NRM6 502 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 SPTLC3Q9NUV7 552 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 GAKO14976 1311 aa17.49■□□□□ 0.39
MBD1-217ENST00000588937 IKBKBO14920 756 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 TPM2P07951 284 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 MMP10P09238 476 aa17.48■□□□□ 0.39
MBD1-217ENST00000588937 PTGS1P23219 599 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms