RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SUPT20HL1Q3ZLR7 823 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 DCAF15Q66K64 600 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 RCSD1Q6JBY9 416 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 APOA5Q6Q788 366 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 KAT14Q9H8E8 782 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 ZBTB43O43298 467 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 GH2P01242 217 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 POTEJP0CG39 1038 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 ATP2B2Q01814 1243 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 RAB3GAP1Q15042 981 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 MICU3Q86XE3 530 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 CLEC10AQ8IUN9 316 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 CCDC144CPQ8IYA2 1237 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 ZNF654Q8IZM8 581 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 NUP133Q8WUM0 1156 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 NMRK2Q9NPI5 230 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 MTMR4Q9NYA4 1195 aa16.98■□□□□ 0.31
NPC1-207ENST00000588867 PFKFB2O60825 505 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 CUL4AQ13619 759 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 SEPT2Q15019 361 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 CATIPQ7Z7H3 387 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 NCOA5Q9HCD5 579 aaKnown RBP16.97■□□□□ 0.31
NPC1-207ENST00000588867 DTNBO60941 627 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 JAG1P78504 1218 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 SCRN1Q12765 414 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 PRKG1Q13976 671 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 TMEM179Q6ZVK1 233 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 ANKS1AQ92625 1134 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 GTF3C6Q969F1 213 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 TMEM47Q9BQJ4 181 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 GLIS2Q9BZE0 524 aaPredicted RBP16.97■□□□□ 0.31
NPC1-207ENST00000588867 CLIP2Q9UDT6 1046 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 FZD1Q9UP38 647 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 PLIN4Q96Q06 1357 aa16.97■□□□□ 0.31
NPC1-207ENST00000588867 IGKV6D-41A0A0C4DH26 115 aa16.96■□□□□ 0.31
NPC1-207ENST00000588867 CAP2P40123 477 aa16.96■□□□□ 0.31
NPC1-207ENST00000588867 METAP2P50579 478 aaKnown RBP eCLIP16.96■□□□□ 0.31
NPC1-207ENST00000588867 CDC37L1Q7L3B6 337 aa16.96■□□□□ 0.31
NPC1-207ENST00000588867 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
NPC1-207ENST00000588867 ZNF341Q9BYN7 854 aa16.96■□□□□ 0.31
NPC1-207ENST00000588867 KANSL2Q9H9L4 492 aa16.96■□□□□ 0.31
NPC1-207ENST00000588867 MTMR7Q9Y216 660 aa16.96■□□□□ 0.31
NPC1-207ENST00000588867 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.3
NPC1-207ENST00000588867 TTLL1O95922 423 aa16.96■□□□□ 0.3
NPC1-207ENST00000588867 ST3GAL1Q11201 340 aa16.96■□□□□ 0.3
NPC1-207ENST00000588867 MAP1SQ66K74 1059 aaPredicted RBP16.96■□□□□ 0.3
NPC1-207ENST00000588867 PNMA1Q8ND90 353 aa16.96■□□□□ 0.3
NPC1-207ENST00000588867 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.96■□□□□ 0.3
NPC1-207ENST00000588867 GOLGA8AA7E2F4 631 aa16.95■□□□□ 0.3
NPC1-207ENST00000588867 TOP1P11387 765 aaKnown RBP16.95■□□□□ 0.3
NPC1-207ENST00000588867 GUCY1A2P33402 732 aa16.95■□□□□ 0.3
NPC1-207ENST00000588867 EEF2P13639 858 aaKnown RBP16.94■□□□□ 0.3
NPC1-207ENST00000588867 ICA1Q05084 483 aa16.94■□□□□ 0.3
NPC1-207ENST00000588867 CDCA5Q96FF9 252 aa16.94■□□□□ 0.3
NPC1-207ENST00000588867 INTS4Q96HW7 963 aaKnown RBP16.94■□□□□ 0.3
NPC1-207ENST00000588867 ZBTB21Q9ULJ3 1066 aa16.94■□□□□ 0.3
NPC1-207ENST00000588867 CPLX1O14810 134 aa16.94■□□□□ 0.3
NPC1-207ENST00000588867 DHX16O60231 1041 aaKnown RBP16.94■□□□□ 0.3
NPC1-207ENST00000588867 ADD1P35611 737 aaKnown RBP16.94■□□□□ 0.3
NPC1-207ENST00000588867 PPP4R3BQ5MIZ7 849 aa16.94■□□□□ 0.3
NPC1-207ENST00000588867 LRRC47Q8N1G4 583 aaKnown RBP16.94■□□□□ 0.3
NPC1-207ENST00000588867 FANCBQ8NB91 859 aa16.94■□□□□ 0.3
NPC1-207ENST00000588867 WRNIP1Q96S55 665 aa16.94■□□□□ 0.3
NPC1-207ENST00000588867 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.94■□□□□ 0.3
NPC1-207ENST00000588867 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
NPC1-207ENST00000588867 CALM1P0DP23 149 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 CALM2P0DP24 149 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 CALM3P0DP25 149 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 INPP5BP32019 993 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 NF2P35240 595 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 NOVP48745 357 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 TROAPQ12815 778 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 RTN1Q16799 776 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 SMC3Q9UQE7 1217 aa16.93■□□□□ 0.3
NPC1-207ENST00000588867 GREB1LQ9C091 1923 aaPredicted RBP16.93■□□□□ 0.3
NPC1-207ENST00000588867 RAD21O60216 631 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 PPFIA3O75145 1194 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 DDAH1O94760 285 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 ASNSP08243 561 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 CDC27P30260 824 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
NPC1-207ENST00000588867 NYAP2Q9P242 653 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
NPC1-207ENST00000588867 USP2O75604 605 aaPredicted RBP16.92■□□□□ 0.3
NPC1-207ENST00000588867 LDHDQ86WU2 507 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 SIAH1Q8IUQ4 282 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 CTCFLQ8NI51 663 aaPredicted RBP16.92■□□□□ 0.3
NPC1-207ENST00000588867 ZKSCAN4Q969J2 545 aaPredicted RBP16.92■□□□□ 0.3
NPC1-207ENST00000588867 KLRG1Q96E93 195 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 ZNF112Q9UJU3 913 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 SSC5DA1L4H1 1573 aa16.92■□□□□ 0.3
NPC1-207ENST00000588867 MYH4Q9Y623 1939 aa16.91■□□□□ 0.3
NPC1-207ENST00000588867 RCAN1P53805 252 aa16.91■□□□□ 0.3
NPC1-207ENST00000588867 TTLL12Q14166 644 aaPredicted RBP16.91■□□□□ 0.3
NPC1-207ENST00000588867 CCDC84Q86UT8 332 aaPredicted RBP16.91■□□□□ 0.3
NPC1-207ENST00000588867 DDX11Q96FC9 970 aa16.91■□□□□ 0.3
NPC1-207ENST00000588867 FAM217BQ9NTX9 383 aaPredicted RBP16.91■□□□□ 0.3
NPC1-207ENST00000588867 CCDC196A0A1B0GTZ2 297 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms