RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 MCMDC2Q4G0Z9 681 aa12.21□□□□□ -0.45
APOC1-203ENST00000588802 CERS3Q8IU89 383 aa12.21□□□□□ -0.45
APOC1-203ENST00000588802 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
APOC1-203ENST00000588802 SPRYD3Q8NCJ5 442 aa12.21□□□□□ -0.45
APOC1-203ENST00000588802 NKX2-3Q8TAU0 364 aa12.21□□□□□ -0.45
APOC1-203ENST00000588802 RNF208Q9H0X6 261 aa12.21□□□□□ -0.45
APOC1-203ENST00000588802 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.45
APOC1-203ENST00000588802 HELLSQ9NRZ9 838 aa12.21□□□□□ -0.45
APOC1-203ENST00000588802 CENPFP49454 3210 aa12.21□□□□□ -0.46
APOC1-203ENST00000588802 MKI67P46013 3256 aaKnown RBP12.21□□□□□ -0.46
APOC1-203ENST00000588802 ADCY3O60266 1144 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 PEX10O60683 326 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 FLT3LGP49771 235 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 UBXN2AP68543 259 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 MTMR2Q13614 643 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 TTF1Q15361 905 aaPredicted RBP12.2□□□□□ -0.46
APOC1-203ENST00000588802 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
APOC1-203ENST00000588802 OSBP2Q969R2 916 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 IL17RAQ96F46 866 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 DNAJC18Q9H819 358 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 AS3MTQ9HBK9 375 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 GINM1Q9NU53 330 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 HERC5Q9UII4 1024 aaKnown RBP12.2□□□□□ -0.46
APOC1-203ENST00000588802 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 DOCK1Q14185 1865 aa12.2□□□□□ -0.46
APOC1-203ENST00000588802 RBBP6Q7Z6E9 1792 aaKnown RBP12.2□□□□□ -0.46
APOC1-203ENST00000588802 K7ELQ4 463 aaPredicted RBP12.19□□□□□ -0.46
APOC1-203ENST00000588802 SLC27A2O14975 620 aa12.19□□□□□ -0.46
APOC1-203ENST00000588802 ZFYP08048 801 aaPredicted RBP12.19□□□□□ -0.46
APOC1-203ENST00000588802 PDE6AP16499 860 aa12.19□□□□□ -0.46
APOC1-203ENST00000588802 ADD2P35612 726 aa12.19□□□□□ -0.46
APOC1-203ENST00000588802 CREB3L3Q68CJ9 461 aa12.19□□□□□ -0.46
APOC1-203ENST00000588802 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
APOC1-203ENST00000588802 APPBP2Q92624 585 aa12.19□□□□□ -0.46
APOC1-203ENST00000588802 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
APOC1-203ENST00000588802 SHISA4Q96DD7 197 aa12.19□□□□□ -0.46
APOC1-203ENST00000588802 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
APOC1-203ENST00000588802 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.46
APOC1-203ENST00000588802 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
APOC1-203ENST00000588802 ASCC2Q9H1I8 757 aaPredicted RBP12.19□□□□□ -0.46
APOC1-203ENST00000588802 SLKQ9H2G2 1235 aaPredicted RBP12.19□□□□□ -0.46
APOC1-203ENST00000588802 ST18O60284 1047 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 INHAP05111 366 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 HLA-DOAP06340 250 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 NEK4P51957 841 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.462e-8■■■■■ 46.6
APOC1-203ENST00000588802 NECTIN1Q15223 517 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 ZYXQ15942 572 aaKnown RBP12.18□□□□□ -0.46
APOC1-203ENST00000588802 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 FOXP4Q8IVH2 680 aaPredicted RBP12.18□□□□□ -0.46
APOC1-203ENST00000588802 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 DPF3Q92784 378 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 KCNB2Q92953 911 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 COA7Q96BR5 231 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 TMOD4Q9NZQ9 345 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 TAF6LQ9Y6J9 622 aa12.18□□□□□ -0.46
APOC1-203ENST00000588802 BRCA2P51587 3418 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 PHIPQ8WWQ0 1821 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 TCRBV5S4A2TA0A5A2 114 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 GH2P01242 217 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 ASNSP08243 561 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 GCLCP48506 637 aaPredicted RBP12.17□□□□□ -0.46
APOC1-203ENST00000588802 IRX3P78415 501 aaPredicted RBP12.17□□□□□ -0.46
APOC1-203ENST00000588802 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 IRF5Q13568 498 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 ZSCAN25Q6NSZ9 544 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
APOC1-203ENST00000588802 METTL16Q86W50 562 aaKnown RBP12.17□□□□□ -0.46
APOC1-203ENST00000588802 PXYLP1Q8TE99 480 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 JAKMIP1Q96N16 626 aaKnown RBP12.17□□□□□ -0.46
APOC1-203ENST00000588802 P2RX7Q99572 595 aaKnown RBP12.17□□□□□ -0.46
APOC1-203ENST00000588802 PUS7LQ9H0K6 701 aaKnown RBP12.17□□□□□ -0.46
APOC1-203ENST00000588802 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 ZBTB21Q9ULJ3 1066 aa12.17□□□□□ -0.46
APOC1-203ENST00000588802 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
APOC1-203ENST00000588802 FOXP2O15409 715 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 GPAA1O43292 621 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 GJB1P08034 283 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 CPA1P15085 419 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 BACE1P56817 501 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 FAM110CQ1W6H9 321 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 HABP4Q5JVS0 413 aaKnown RBP12.16□□□□□ -0.46
APOC1-203ENST00000588802 U2AF1L4Q8WU68 220 aaKnown RBP12.16□□□□□ -0.46
APOC1-203ENST00000588802 WDR18Q9BV38 432 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
APOC1-203ENST00000588802 MAGEB6P1A0A0J9YX57 407 aa12.15□□□□□ -0.46
APOC1-203ENST00000588802 USP17L10C9JJH3 530 aa12.15□□□□□ -0.46
APOC1-203ENST00000588802 H0YGN5 161 aa12.15□□□□□ -0.46
APOC1-203ENST00000588802 TFRCP02786 760 aaKnown RBP12.15□□□□□ -0.46
APOC1-203ENST00000588802 POLR3DP05423 398 aaPredicted RBP12.15□□□□□ -0.46
APOC1-203ENST00000588802 HSPD1P10809 573 aaKnown RBP12.15□□□□□ -0.46
APOC1-203ENST00000588802 CASTP20810 708 aaKnown RBP12.15□□□□□ -0.46
APOC1-203ENST00000588802 CYP2B6P20813 491 aa12.15□□□□□ -0.46
APOC1-203ENST00000588802 GJA8P48165 433 aa12.15□□□□□ -0.46
APOC1-203ENST00000588802 EVX2Q03828 476 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms