RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 RLFQ13129 1914 aa22.49■■□□□ 1.19
CCDC43-204ENST00000588687 CERS3Q8IU89 383 aa22.48■■□□□ 1.19
CCDC43-204ENST00000588687 ITPRIPQ8IWB1 547 aa22.48■■□□□ 1.19
CCDC43-204ENST00000588687 PAGR1Q9BTK6 254 aa22.48■■□□□ 1.19
CCDC43-204ENST00000588687 VCAM1P19320 739 aa22.47■■□□□ 1.19
CCDC43-204ENST00000588687 CCND3P30281 292 aaPredicted RBP22.47■■□□□ 1.19
CCDC43-204ENST00000588687 SHMT1P34896 483 aa22.47■■□□□ 1.19
CCDC43-204ENST00000588687 RGS2P41220 211 aa22.47■■□□□ 1.19
CCDC43-204ENST00000588687 PDE3AQ14432 1141 aa22.47■■□□□ 1.19
CCDC43-204ENST00000588687 PLEKHH3Q7Z736 793 aa22.47■■□□□ 1.19
CCDC43-204ENST00000588687 FTSJ3Q8IY81 847 aaKnown RBP22.47■■□□□ 1.19
CCDC43-204ENST00000588687 TRMT44Q8IYL2 757 aaKnown RBP22.47■■□□□ 1.19
CCDC43-204ENST00000588687 KIAA1683Q9H0B3 1180 aa22.47■■□□□ 1.19
CCDC43-204ENST00000588687 GUCY1A2P33402 732 aa22.46■■□□□ 1.19
CCDC43-204ENST00000588687 ZYXQ15942 572 aaKnown RBP22.46■■□□□ 1.19
CCDC43-204ENST00000588687 TMED8Q6PL24 325 aaPredicted RBP22.46■■□□□ 1.19
CCDC43-204ENST00000588687 LBX2Q6XYB7 198 aa22.46■■□□□ 1.19
CCDC43-204ENST00000588687 ACER1Q8TDN7 264 aa22.46■■□□□ 1.19
CCDC43-204ENST00000588687 RABGAP1Q9Y3P9 1069 aa22.46■■□□□ 1.19
CCDC43-204ENST00000588687 IGHA2P01877 340 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 SYN1P17600 705 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 MAGEA10P43363 369 aaPredicted RBP22.45■■□□□ 1.18
CCDC43-204ENST00000588687 USP5P45974 858 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 PLCD1P51178 756 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 EVX2Q03828 476 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 GABPAQ06546 454 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 CATSPERGQ6ZRH7 1159 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 FLRT1Q9NZU1 646 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 EXOC6BQ9Y2D4 811 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 EYSQ5T1H1 3165 aa22.45■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L15C9J2P7 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L13C9JLJ4 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L11C9JVI0 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L18D6R9N7 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L22D6RA61 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L17D6RBQ6 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L19D6RCP7 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L20D6RJB6 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 USP17L24Q0WX57 530 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 MAP2K5Q13163 448 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 FEZ1Q99689 392 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 BTBD7Q9P203 1132 aa22.44■■□□□ 1.18
CCDC43-204ENST00000588687 PARP14Q460N5 1801 aa22.43■■□□□ 1.18
CCDC43-204ENST00000588687 SPDYE16A6NNV3 312 aaPredicted RBP22.43■■□□□ 1.18
CCDC43-204ENST00000588687 MAP3K12Q12852 859 aa22.43■■□□□ 1.18
CCDC43-204ENST00000588687 ABCB5Q2M3G0 1257 aa22.43■■□□□ 1.18
CCDC43-204ENST00000588687 CERKLQ49MI3 558 aaPredicted RBP22.43■■□□□ 1.18
CCDC43-204ENST00000588687 AACSQ86V21 672 aa22.43■■□□□ 1.18
CCDC43-204ENST00000588687 CUL9Q8IWT3 2517 aa22.42■■□□□ 1.18
CCDC43-204ENST00000588687 USP14P54578 494 aa22.42■■□□□ 1.18
CCDC43-204ENST00000588687 RAB3GAP1Q15042 981 aa22.42■■□□□ 1.18
CCDC43-204ENST00000588687 LRRC26Q2I0M4 334 aa22.42■■□□□ 1.18
CCDC43-204ENST00000588687 LRIT3Q3SXY7 679 aa22.42■■□□□ 1.18
CCDC43-204ENST00000588687 GPR153Q6NV75 609 aa22.42■■□□□ 1.18
CCDC43-204ENST00000588687 TTC6Q86TZ1 520 aa22.42■■□□□ 1.18
CCDC43-204ENST00000588687 CDH23Q9H251 3354 aa22.41■■□□□ 1.18
CCDC43-204ENST00000588687 HOXC6P09630 235 aa22.41■■□□□ 1.18
CCDC43-204ENST00000588687 GRB14Q14449 540 aa22.41■■□□□ 1.18
CCDC43-204ENST00000588687 LTBP2Q14767 1821 aa22.41■■□□□ 1.18
CCDC43-204ENST00000588687 MYH8P13535 1937 aa22.4■■□□□ 1.18
CCDC43-204ENST00000588687 PDE6AP16499 860 aa22.4■■□□□ 1.18
CCDC43-204ENST00000588687 PTPREP23469 700 aa22.4■■□□□ 1.18
CCDC43-204ENST00000588687 ERC1Q8IUD2 1116 aa22.4■■□□□ 1.18
CCDC43-204ENST00000588687 TDHQ8IZJ6 230 aa22.4■■□□□ 1.18
CCDC43-204ENST00000588687 RPAP3Q9H6T3 665 aaPredicted RBP22.4■■□□□ 1.18
CCDC43-204ENST00000588687 A0A1W2PRG0 241 aa22.39■■□□□ 1.17
CCDC43-204ENST00000588687 TCRBV5S4A2TA0A5A2 114 aa22.39■■□□□ 1.17
CCDC43-204ENST00000588687 SLC15A5A6NIM6 579 aa22.39■■□□□ 1.17
CCDC43-204ENST00000588687 CCNA1P78396 465 aa22.39■■□□□ 1.17
CCDC43-204ENST00000588687 HNRNPUQ00839 825 aaKnown RBP eCLIP22.39■■□□□ 1.17
CCDC43-204ENST00000588687 SEPT2Q15019 361 aa22.39■■□□□ 1.17
CCDC43-204ENST00000588687 CCAR1Q8IX12 1150 aaKnown RBP22.39■■□□□ 1.17
CCDC43-204ENST00000588687 EDC3Q96F86 508 aaKnown RBP22.39■■□□□ 1.17
CCDC43-204ENST00000588687 IL1RAPL2Q9NP60 686 aa22.39■■□□□ 1.17
CCDC43-204ENST00000588687 MAGEB6P1A0A0J9YX57 407 aa22.38■■□□□ 1.17
CCDC43-204ENST00000588687 NPLOC4Q8TAT6 608 aa22.38■■□□□ 1.17
CCDC43-204ENST00000588687 RHPN1Q8TCX5 695 aa22.38■■□□□ 1.17
CCDC43-204ENST00000588687 PANK1Q8TE04 598 aa22.38■■□□□ 1.17
CCDC43-204ENST00000588687 VCANP13611 3396 aa22.37■■□□□ 1.17
CCDC43-204ENST00000588687 TRPV1Q8NER1 839 aa22.37■■□□□ 1.17
CCDC43-204ENST00000588687 BAZ2AQ9UIF9 1905 aaKnown RBP22.37■■□□□ 1.17
CCDC43-204ENST00000588687 KIAA1755Q5JYT7 1200 aa22.36■■□□□ 1.17
CCDC43-204ENST00000588687 SLC9C2Q5TAH2 1124 aa22.36■■□□□ 1.17
CCDC43-204ENST00000588687 Q7L0L9 218 aa22.36■■□□□ 1.17
CCDC43-204ENST00000588687 LCORLQ8N3X6 602 aa22.36■■□□□ 1.17
CCDC43-204ENST00000588687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.36■■□□□ 1.17
CCDC43-204ENST00000588687 CABP5Q9NP86 173 aa22.36■■□□□ 1.17
CCDC43-204ENST00000588687 DCP1AQ9NPI6 582 aaPredicted RBP22.36■■□□□ 1.17
CCDC43-204ENST00000588687 DDX20Q9UHI6 824 aaKnown RBP22.36■■□□□ 1.17
CCDC43-204ENST00000588687 ZNF532Q9HCE3 1301 aa22.35■■□□□ 1.17
CCDC43-204ENST00000588687 GLRX3O76003 335 aaKnown RBP22.35■■□□□ 1.17
CCDC43-204ENST00000588687 CYBAP13498 195 aa22.35■■□□□ 1.17
CCDC43-204ENST00000588687 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
CCDC43-204ENST00000588687 MFSD14CQ5VZR4 134 aa22.35■■□□□ 1.17
CCDC43-204ENST00000588687 SLC44A5Q8NCS7 719 aa22.35■■□□□ 1.17
CCDC43-204ENST00000588687 SDR42E1Q8WUS8 393 aa22.35■■□□□ 1.17
CCDC43-204ENST00000588687 CRNKL1Q9BZJ0 848 aaKnown RBP22.35■■□□□ 1.17
CCDC43-204ENST00000588687 UBE2OQ9C0C9 1292 aaKnown RBP22.35■■□□□ 1.17
CCDC43-204ENST00000588687 MYH7P12883 1935 aa22.35■■□□□ 1.17
CCDC43-204ENST00000588687 CYP2D6P10635 497 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms