RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 BTBD19C9JJ37 291 aa23.86■■□□□ 1.41
ATG4D-208ENST00000588667 USP17L10C9JJH3 530 aa23.86■■□□□ 1.41
ATG4D-208ENST00000588667 FOXN1O15353 648 aa23.86■■□□□ 1.41
ATG4D-208ENST00000588667 TRPA1O75762 1119 aa23.86■■□□□ 1.41
ATG4D-208ENST00000588667 BACE1P56817 501 aa23.86■■□□□ 1.41
ATG4D-208ENST00000588667 HAND2P61296 217 aa23.86■■□□□ 1.41
ATG4D-208ENST00000588667 MTMR2Q13614 643 aa23.86■■□□□ 1.41
ATG4D-208ENST00000588667 C19orf81C9J6K1 198 aa23.85■■□□□ 1.41
ATG4D-208ENST00000588667 ZNF213O14771 459 aa23.85■■□□□ 1.41
ATG4D-208ENST00000588667 FGRP09769 529 aa23.85■■□□□ 1.41
ATG4D-208ENST00000588667 PCP11498 1178 aaKnown RBP23.85■■□□□ 1.41
ATG4D-208ENST00000588667 SH3D19Q5HYK7 790 aa23.85■■□□□ 1.41
ATG4D-208ENST00000588667 ANKRD23Q86SG2 305 aa23.85■■□□□ 1.41
ATG4D-208ENST00000588667 FAM43AQ8N2R8 423 aa23.85■■□□□ 1.41
ATG4D-208ENST00000588667 PLIN4Q96Q06 1357 aa23.85■■□□□ 1.41
ATG4D-208ENST00000588667 ORC4O43929 436 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 HMGCS2P54868 508 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 PTH1RQ03431 593 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 ICA1Q05084 483 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 IMMTQ16891 758 aaKnown RBP23.84■■□□□ 1.41
ATG4D-208ENST00000588667 GADL1Q6ZQY3 521 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 KIAA1211Q6ZU35 1233 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 PROCA1Q8NCQ7 364 aaPredicted RBP23.84■■□□□ 1.41
ATG4D-208ENST00000588667 FEZ1Q99689 392 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 CFHR5Q9BXR6 569 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 NBPF3Q9H094 633 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 KANSL2Q9H9L4 492 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 STAG1Q8WVM7 1258 aa23.84■■□□□ 1.41
ATG4D-208ENST00000588667 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.84■■□□□ 1.41
ATG4D-208ENST00000588667 RNF41Q9H4P4 317 aaPredicted RBP23.84■■□□□ 1.41
ATG4D-208ENST00000588667 U3KPZ7 1027 aaPredicted RBP23.84■■□□□ 1.41
ATG4D-208ENST00000588667 MYH4Q9Y623 1939 aa23.83■■□□□ 1.41
ATG4D-208ENST00000588667 CTCFP49711 727 aaPredicted RBP23.83■■□□□ 1.41
ATG4D-208ENST00000588667 AKNAD1Q5T1N1 836 aa23.83■■□□□ 1.41
ATG4D-208ENST00000588667 TBC1D10CQ8IV04 446 aa23.83■■□□□ 1.41
ATG4D-208ENST00000588667 ACER1Q8TDN7 264 aa23.83■■□□□ 1.41
ATG4D-208ENST00000588667 KIAA1683Q9H0B3 1180 aa23.83■■□□□ 1.41
ATG4D-208ENST00000588667 TACC3Q9Y6A5 838 aa23.83■■□□□ 1.41
ATG4D-208ENST00000588667 TSPY3P0CV98 308 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 TSPY8P0CW00 308 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 RBM25P49756 843 aaKnown RBP23.82■■□□□ 1.4
ATG4D-208ENST00000588667 GPAT2Q6NUI2 795 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 CLEC10AQ8IUN9 316 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 MAP4K1Q92918 833 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 ARHGEF10LQ9HCE6 1279 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 INCENPQ9NQS7 918 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 TMOD4Q9NZQ9 345 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 AGTPBP1Q9UPW5 1226 aa23.82■■□□□ 1.4
ATG4D-208ENST00000588667 USP14P54578 494 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 USP17L2Q6R6M4 530 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 MFSD6Q6ZSS7 791 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 NEDD1Q8NHV4 660 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 LSG1Q9H089 658 aaKnown RBP23.81■■□□□ 1.4
ATG4D-208ENST00000588667 TSKSQ9UJT2 592 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 SLC45A1Q9Y2W3 748 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 IGKV6D-41A0A0C4DH26 115 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 PDHXO00330 501 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 HSPA8P11142 646 aaKnown RBP23.81■■□□□ 1.4
ATG4D-208ENST00000588667 TFAP4Q01664 338 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 TAF1CQ15572 869 aaPredicted RBP23.81■■□□□ 1.4
ATG4D-208ENST00000588667 FAM47AQ5JRC9 791 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 C12orf42Q96LP6 360 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 SH2D4AQ9H788 454 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 ANO2Q9NQ90 1003 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 TOMM22Q9NS69 142 aa23.81■■□□□ 1.4
ATG4D-208ENST00000588667 A0A1W2PRG0 241 aa23.8■■□□□ 1.4
ATG4D-208ENST00000588667 TSPY2A6NKD2 308 aa23.8■■□□□ 1.4
ATG4D-208ENST00000588667 TBC1D8O95759 1140 aa23.8■■□□□ 1.4
ATG4D-208ENST00000588667 NT5C2P49902 561 aa23.8■■□□□ 1.4
ATG4D-208ENST00000588667 DGKZQ13574 1117 aa23.8■■□□□ 1.4
ATG4D-208ENST00000588667 SIAH1Q8IUQ4 282 aa23.8■■□□□ 1.4
ATG4D-208ENST00000588667 EMILIN3Q9NT22 766 aa23.8■■□□□ 1.4
ATG4D-208ENST00000588667 RANBP6O60518 1105 aaKnown RBP23.79■■□□□ 1.4
ATG4D-208ENST00000588667 EEF2P13639 858 aaKnown RBP23.79■■□□□ 1.4
ATG4D-208ENST00000588667 CRHR2Q13324 411 aa23.79■■□□□ 1.4
ATG4D-208ENST00000588667 ZYXQ15942 572 aaKnown RBP23.79■■□□□ 1.4
ATG4D-208ENST00000588667 TREML2Q5T2D2 321 aa23.79■■□□□ 1.4
ATG4D-208ENST00000588667 USP26Q9BXU7 913 aa23.79■■□□□ 1.4
ATG4D-208ENST00000588667 TMX2Q9Y320 296 aa23.79■■□□□ 1.4
ATG4D-208ENST00000588667 RBM8AQ9Y5S9 174 aaKnown RBP23.79■■□□□ 1.4
ATG4D-208ENST00000588667 NEDD4P46934 1319 aa23.78■■□□□ 1.4
ATG4D-208ENST00000588667 EPB41L2O43491 1005 aaKnown RBP23.78■■□□□ 1.4
ATG4D-208ENST00000588667 PABPC4Q13310 644 aaKnown RBP eCLIP23.78■■□□□ 1.46e-10■■■□□ 17.6
ATG4D-208ENST00000588667 RRP12Q5JTH9 1297 aaKnown RBP23.78■■□□□ 1.4
ATG4D-208ENST00000588667 CEP95Q96GE4 821 aa23.78■■□□□ 1.4
ATG4D-208ENST00000588667 PARK7Q99497 189 aaKnown RBP23.78■■□□□ 1.4
ATG4D-208ENST00000588667 ZFYVE28Q9HCC9 887 aa23.78■■□□□ 1.4
ATG4D-208ENST00000588667 ATP2B2Q01814 1243 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 MTMR4Q9NYA4 1195 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 NYAP2Q9P242 653 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 CASP8AP2Q9UKL3 1982 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 CYP21A2P08686 494 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 LBX1P52954 281 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 NOM1Q5C9Z4 860 aaKnown RBP23.77■■□□□ 1.4
ATG4D-208ENST00000588667 PPP4R3BQ5MIZ7 849 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 ESR2Q92731 530 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 IPO9Q96P70 1041 aaKnown RBP23.77■■□□□ 1.4
ATG4D-208ENST00000588667 PNMA3Q9UL41 463 aa23.77■■□□□ 1.4
ATG4D-208ENST00000588667 TTLL1O95922 423 aa23.76■■□□□ 1.39
ATG4D-208ENST00000588667 R3HDMLQ9H3Y0 253 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms