RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 GH2P01242 217 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 CYP2E1P05181 493 aaPredicted RBP18.73■□□□□ 0.59
IFT20-216ENST00000588477 PTPREP23469 700 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 DYNLL1P63167 89 aaKnown RBP18.73■□□□□ 0.59
IFT20-216ENST00000588477 ATP2B2Q01814 1243 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 ZNF697Q5TEC3 545 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 ATF7IPQ6VMQ6 1270 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 PRKAG2Q9UGJ0 569 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 SMCHD1A6NHR9 2005 aa18.73■□□□□ 0.59
IFT20-216ENST00000588477 SLC15A5A6NIM6 579 aa18.72■□□□□ 0.59
IFT20-216ENST00000588477 NPLOC4Q8TAT6 608 aa18.72■□□□□ 0.59
IFT20-216ENST00000588477 ARHGAP45Q92619 1136 aa18.72■□□□□ 0.59
IFT20-216ENST00000588477 LPAR1Q92633 364 aa18.72■□□□□ 0.59
IFT20-216ENST00000588477 C12orf42Q96LP6 360 aa18.72■□□□□ 0.59
IFT20-216ENST00000588477 FEZ1Q99689 392 aa18.72■□□□□ 0.59
IFT20-216ENST00000588477 IVNS1ABPQ9Y6Y0 642 aa18.72■□□□□ 0.59
IFT20-216ENST00000588477 MYH8P13535 1937 aa18.72■□□□□ 0.59
IFT20-216ENST00000588477 PRUNE2Q8WUY3 3088 aa18.71■□□□□ 0.59
IFT20-216ENST00000588477 MSCO60682 206 aa18.71■□□□□ 0.59
IFT20-216ENST00000588477 GNAI2P04899 355 aa18.71■□□□□ 0.59
IFT20-216ENST00000588477 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
IFT20-216ENST00000588477 RTP1P59025 263 aa18.71■□□□□ 0.59
IFT20-216ENST00000588477 CATSPERGQ6ZRH7 1159 aa18.71■□□□□ 0.59
IFT20-216ENST00000588477 DBNDD2Q9BQY9 259 aa18.71■□□□□ 0.59
IFT20-216ENST00000588477 DNM1LO00429 736 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 CYP2C19P33261 490 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 ZAP70P43403 619 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 USP14P54578 494 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 RAB3GAP1Q15042 981 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 TNNI3KQ59H18 835 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 TATDN1Q6P1N9 297 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 BTBD7Q9P203 1132 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 FPGT-TNNI3KV9GXZ4 949 aa18.7■□□□□ 0.58
IFT20-216ENST00000588477 VCANP13611 3396 aa18.69■□□□□ 0.58
IFT20-216ENST00000588477 HOXC6P09630 235 aa18.69■□□□□ 0.58
IFT20-216ENST00000588477 GRB14Q14449 540 aa18.69■□□□□ 0.58
IFT20-216ENST00000588477 GJC2Q5T442 439 aaPredicted RBP18.69■□□□□ 0.58
IFT20-216ENST00000588477 TRPV1Q8NER1 839 aa18.69■□□□□ 0.58
IFT20-216ENST00000588477 GPR108Q9NPR9 543 aa18.69■□□□□ 0.58
IFT20-216ENST00000588477 PIH1D3Q9NQM4 214 aaKnown RBP18.69■□□□□ 0.58
IFT20-216ENST00000588477 ZNF236Q9UL36 1845 aa18.69■□□□□ 0.58
IFT20-216ENST00000588477 VCAM1P19320 739 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 CYP7A1P22680 504 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 USP5P45974 858 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 SHHQ15465 462 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 LBX2Q6XYB7 198 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 ACER1Q8TDN7 264 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 CDX2Q99626 313 aaPredicted RBP18.68■□□□□ 0.58
IFT20-216ENST00000588477 KIAA1683Q9H0B3 1180 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 TNNQ9UQP3 1299 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 NAV1Q8NEY1 1877 aa18.68■□□□□ 0.58
IFT20-216ENST00000588477 PLXNA1Q9UIW2 1896 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 CYBAP13498 195 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 OS9Q13438 667 aaPredicted RBP18.67■□□□□ 0.58
IFT20-216ENST00000588477 ABCB5Q2M3G0 1257 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 CERKLQ49MI3 558 aaPredicted RBP18.67■□□□□ 0.58
IFT20-216ENST00000588477 ANO1Q5XXA6 986 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 SLC39A5Q6ZMH5 540 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 DPP9Q86TI2 863 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 MIGA1Q8NAN2 632 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 SEMA6BQ9H3T3 888 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 SERPINB13Q9UIV8 391 aa18.67■□□□□ 0.58
IFT20-216ENST00000588477 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
IFT20-216ENST00000588477 PARP14Q460N5 1801 aa18.66■□□□□ 0.58
IFT20-216ENST00000588477 SPDYE16A6NNV3 312 aaPredicted RBP18.66■□□□□ 0.58
IFT20-216ENST00000588477 IGSF3O75054 1194 aa18.66■□□□□ 0.58
IFT20-216ENST00000588477 C9orf50Q5SZB4 431 aa18.66■□□□□ 0.58
IFT20-216ENST00000588477 ARRDC4Q8NCT1 418 aa18.66■□□□□ 0.58
IFT20-216ENST00000588477 ZNF512BQ96KM6 892 aaPredicted RBP18.66■□□□□ 0.58
IFT20-216ENST00000588477 RPAP3Q9H6T3 665 aaPredicted RBP18.66■□□□□ 0.58
IFT20-216ENST00000588477 CABP5Q9NP86 173 aa18.66■□□□□ 0.58
IFT20-216ENST00000588477 PRDM5Q9NQX1 630 aaPredicted RBP18.66■□□□□ 0.58
IFT20-216ENST00000588477 KBTBD13C9JR72 458 aa18.65■□□□□ 0.58
IFT20-216ENST00000588477 IDH1O75874 414 aaKnown RBP18.65■□□□□ 0.58
IFT20-216ENST00000588477 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
IFT20-216ENST00000588477 TRIM27P14373 513 aa18.65■□□□□ 0.58
IFT20-216ENST00000588477 MAFAQ8NHW3 353 aaPredicted RBP18.65■□□□□ 0.58
IFT20-216ENST00000588477 BADQ92934 168 aa18.65■□□□□ 0.58
IFT20-216ENST00000588477 CLUAP1Q96AJ1 413 aa18.65■□□□□ 0.58
IFT20-216ENST00000588477 EHD4Q9H223 541 aa18.65■□□□□ 0.58
IFT20-216ENST00000588477 A0A0G2JMZ2 1700 aa18.65■□□□□ 0.58
IFT20-216ENST00000588477 IPO8O15397 1037 aaKnown RBP18.64■□□□□ 0.57
IFT20-216ENST00000588477 IGHA2P01877 340 aa18.64■□□□□ 0.57
IFT20-216ENST00000588477 ADORA2AP29274 412 aa18.64■□□□□ 0.57
IFT20-216ENST00000588477 TTC6Q86TZ1 520 aa18.64■□□□□ 0.57
IFT20-216ENST00000588477 MYLIPQ8WY64 445 aa18.64■□□□□ 0.57
IFT20-216ENST00000588477 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.57
IFT20-216ENST00000588477 CDH23Q9H251 3354 aa18.63■□□□□ 0.57
IFT20-216ENST00000588477 POLA2Q14181 598 aa18.63■□□□□ 0.57
IFT20-216ENST00000588477 TRIM60Q495X7 471 aa18.63■□□□□ 0.57
IFT20-216ENST00000588477 OLFML2BQ68BL8 750 aa18.63■□□□□ 0.57
IFT20-216ENST00000588477 MAGEB6Q8N7X4 407 aa18.63■□□□□ 0.57
IFT20-216ENST00000588477 MOV10L1Q9BXT6 1211 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms