RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 USP17L15C9J2P7 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP17L13C9JLJ4 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP17L11C9JVI0 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP17L18D6R9N7 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP17L22D6RA61 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP17L17D6RBQ6 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP17L19D6RCP7 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP17L20D6RJB6 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP14P54578 494 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 USP17L24Q0WX57 530 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 CCL14Q16627 93 aa20.41■□□□□ 0.86
LINC01842-201ENST00000588275 DNAJC2Q99543 621 aaKnown RBP20.41■□□□□ 0.86
LINC01842-201ENST00000588275 XRCC5P13010 732 aaKnown RBP20.4■□□□□ 0.86
LINC01842-201ENST00000588275 VCAM1P19320 739 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 PLCD1P51178 756 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 CACNB2Q08289 660 aaPredicted RBP20.4■□□□□ 0.86
LINC01842-201ENST00000588275 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 MAP3K21Q5TCX8 1036 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 TRMT44Q8IYL2 757 aaKnown RBP20.4■□□□□ 0.86
LINC01842-201ENST00000588275 RHPN1Q8TCX5 695 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 ACER1Q8TDN7 264 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 C12orf42Q96LP6 360 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 APBA2Q99767 749 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 RIOK1Q9BRS2 568 aaKnown RBP20.4■□□□□ 0.86
LINC01842-201ENST00000588275 OGDHLQ9ULD0 1010 aa20.4■□□□□ 0.86
LINC01842-201ENST00000588275 MPHOSPH10O00566 681 aaKnown RBP20.39■□□□□ 0.85
LINC01842-201ENST00000588275 SYN1P17600 705 aa20.39■□□□□ 0.85
LINC01842-201ENST00000588275 SHMT1P34896 483 aa20.39■□□□□ 0.85
LINC01842-201ENST00000588275 MNX1P50219 401 aaPredicted RBP20.39■□□□□ 0.85
LINC01842-201ENST00000588275 CCNA1P78396 465 aa20.39■□□□□ 0.85
LINC01842-201ENST00000588275 TTF1Q15361 905 aaPredicted RBP20.39■□□□□ 0.85
LINC01842-201ENST00000588275 MORN1Q5T089 497 aa20.39■□□□□ 0.85
LINC01842-201ENST00000588275 SLC9C2Q5TAH2 1124 aa20.39■□□□□ 0.85
LINC01842-201ENST00000588275 POTEEQ6S8J3 1075 aa20.39■□□□□ 0.85
LINC01842-201ENST00000588275 CRNKL1Q9BZJ0 848 aaKnown RBP20.39■□□□□ 0.85
LINC01842-201ENST00000588275 RABGAP1Q9Y3P9 1069 aa20.39■□□□□ 0.85
LINC01842-201ENST00000588275 A0A1W2PPC1 479 aa20.38■□□□□ 0.85
LINC01842-201ENST00000588275 GOLIM4O00461 696 aa20.38■□□□□ 0.85
LINC01842-201ENST00000588275 CNMDO75829 334 aa20.38■□□□□ 0.85
LINC01842-201ENST00000588275 PDE6AP16499 860 aa20.38■□□□□ 0.85
LINC01842-201ENST00000588275 CCND3P30281 292 aaPredicted RBP20.38■□□□□ 0.85
LINC01842-201ENST00000588275 TMED8Q6PL24 325 aaPredicted RBP20.38■□□□□ 0.85
LINC01842-201ENST00000588275 CATSPERGQ6ZRH7 1159 aa20.38■□□□□ 0.85
LINC01842-201ENST00000588275 CLASRPQ8N2M8 674 aaKnown RBP20.38■□□□□ 0.85
LINC01842-201ENST00000588275 USP6NLQ92738 828 aa20.38■□□□□ 0.85
LINC01842-201ENST00000588275 KIAA1683Q9H0B3 1180 aa20.38■□□□□ 0.85
LINC01842-201ENST00000588275 RPAP3Q9H6T3 665 aaPredicted RBP20.38■□□□□ 0.85
LINC01842-201ENST00000588275 MCM9Q9NXL9 1143 aa20.38■□□□□ 0.85
LINC01842-201ENST00000588275 ZNF532Q9HCE3 1301 aa20.37■□□□□ 0.85
LINC01842-201ENST00000588275 SOX1O00570 391 aaPredicted RBP20.37■□□□□ 0.85
LINC01842-201ENST00000588275 GLRX3O76003 335 aaKnown RBP20.37■□□□□ 0.85
LINC01842-201ENST00000588275 IFIT2P09913 472 aaKnown RBP20.37■□□□□ 0.85
LINC01842-201ENST00000588275 MAP2K5Q13163 448 aa20.37■□□□□ 0.85
LINC01842-201ENST00000588275 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
LINC01842-201ENST00000588275 EVX2Q03828 476 aa20.36■□□□□ 0.85
LINC01842-201ENST00000588275 SEPT2Q15019 361 aa20.36■□□□□ 0.85
LINC01842-201ENST00000588275 SDR42E1Q8WUS8 393 aa20.36■□□□□ 0.85
LINC01842-201ENST00000588275 KIF1BPQ96EK5 621 aa20.36■□□□□ 0.85
LINC01842-201ENST00000588275 EDC3Q96F86 508 aaKnown RBP20.36■□□□□ 0.85
LINC01842-201ENST00000588275 LRCH3Q96II8 777 aa20.36■□□□□ 0.85
LINC01842-201ENST00000588275 IVNS1ABPQ9Y6Y0 642 aa20.36■□□□□ 0.85
LINC01842-201ENST00000588275 PFASO15067 1338 aa20.35■□□□□ 0.85
LINC01842-201ENST00000588275 MS4A1P11836 297 aa20.35■□□□□ 0.85
LINC01842-201ENST00000588275 LCORLQ8N3X6 602 aa20.35■□□□□ 0.85
LINC01842-201ENST00000588275 BTBD7Q9P203 1132 aa20.35■□□□□ 0.85
LINC01842-201ENST00000588275 FRMPD3Q5JV73 1810 aa20.34■□□□□ 0.85
LINC01842-201ENST00000588275 MYH8P13535 1937 aa20.34■□□□□ 0.85
LINC01842-201ENST00000588275 SPDYE16A6NNV3 312 aaPredicted RBP20.34■□□□□ 0.85
LINC01842-201ENST00000588275 HMMRO75330 724 aa20.34■□□□□ 0.85
LINC01842-201ENST00000588275 GUCY1A2P33402 732 aa20.34■□□□□ 0.85
LINC01842-201ENST00000588275 MFSD14CQ5VZR4 134 aa20.34■□□□□ 0.85
LINC01842-201ENST00000588275 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
LINC01842-201ENST00000588275 GDF15Q99988 308 aa20.34■□□□□ 0.85
LINC01842-201ENST00000588275 TANGO6Q9C0B7 1094 aa20.34■□□□□ 0.85
LINC01842-201ENST00000588275 COG6Q9Y2V7 657 aa20.34■□□□□ 0.85
LINC01842-201ENST00000588275 CYP2D6P10635 497 aa20.33■□□□□ 0.85
LINC01842-201ENST00000588275 PTPREP23469 700 aa20.33■□□□□ 0.85
LINC01842-201ENST00000588275 GABPAQ06546 454 aa20.33■□□□□ 0.85
LINC01842-201ENST00000588275 SLC44A5Q8NCS7 719 aa20.33■□□□□ 0.85
LINC01842-201ENST00000588275 ARMT1Q9H993 441 aa20.33■□□□□ 0.85
LINC01842-201ENST00000588275 FLRT1Q9NZU1 646 aa20.33■□□□□ 0.85
LINC01842-201ENST00000588275 SLC15A5A6NIM6 579 aa20.32■□□□□ 0.84
LINC01842-201ENST00000588275 CNGA1P29973 690 aa20.32■□□□□ 0.84
LINC01842-201ENST00000588275 MAGEA10P43363 369 aaPredicted RBP20.32■□□□□ 0.84
LINC01842-201ENST00000588275 ATP2B2Q01814 1243 aa20.32■□□□□ 0.84
LINC01842-201ENST00000588275 LHX8Q68G74 356 aa20.32■□□□□ 0.84
LINC01842-201ENST00000588275 RPAP2Q8IXW5 612 aaPredicted RBP20.32■□□□□ 0.84
LINC01842-201ENST00000588275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.32■□□□□ 0.84
LINC01842-201ENST00000588275 BOLA2Q9H3K6 86 aa20.32■□□□□ 0.84
LINC01842-201ENST00000588275 DCP1AQ9NPI6 582 aaPredicted RBP20.32■□□□□ 0.84
LINC01842-201ENST00000588275 DDX19BQ9UMR2 479 aa20.32■□□□□ 0.84
LINC01842-201ENST00000588275 LAMA3Q16787 3333 aa20.31■□□□□ 0.84
LINC01842-201ENST00000588275 A0A1W2PRG0 241 aa20.31■□□□□ 0.84
LINC01842-201ENST00000588275 TCRBV5S4A2TA0A5A2 114 aa20.31■□□□□ 0.84
LINC01842-201ENST00000588275 SLFNL1Q499Z3 407 aa20.31■□□□□ 0.84
LINC01842-201ENST00000588275 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
LINC01842-201ENST00000588275 LBX2Q6XYB7 198 aa20.31■□□□□ 0.84
LINC01842-201ENST00000588275 DYNLL2Q96FJ2 89 aa20.31■□□□□ 0.84
LINC01842-201ENST00000588275 PAG1Q9NWQ8 432 aa20.31■□□□□ 0.84
LINC01842-201ENST00000588275 BAZ2AQ9UIF9 1905 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms