RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 PRR29P0C7W0 189 aa22.62■■□□□ 1.21
MBD1-216ENST00000587605 TROAPQ12815 778 aa22.62■■□□□ 1.21
MBD1-216ENST00000587605 SPECC1LQ69YQ0 1117 aa22.62■■□□□ 1.21
MBD1-216ENST00000587605 SYT10Q6XYQ8 523 aa22.62■■□□□ 1.21
MBD1-216ENST00000587605 HOMER1Q86YM7 354 aa22.62■■□□□ 1.21
MBD1-216ENST00000587605 CRNKL1Q9BZJ0 848 aaKnown RBP22.62■■□□□ 1.21
MBD1-216ENST00000587605 NYXQ9GZU5 481 aa22.62■■□□□ 1.21
MBD1-216ENST00000587605 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.62■■□□□ 1.21
MBD1-216ENST00000587605 MYH13Q9UKX3 1938 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 TRAPPC10P48553 1259 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 CBX1P83916 185 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 UTP14CQ5TAP6 766 aaKnown RBP22.61■■□□□ 1.21
MBD1-216ENST00000587605 ANKRD2Q9GZV1 360 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 ATP8A2Q9NTI2 1148 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 INTS13Q9NVM9 706 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 VPS54Q9P1Q0 977 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 BAZ2AQ9UIF9 1905 aaKnown RBP22.61■■□□□ 1.21
MBD1-216ENST00000587605 CNTNAP4Q9C0A0 1308 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 STX10O60499 249 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 CTR9Q6PD62 1173 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 SH3RF1Q7Z6J0 888 aa22.61■■□□□ 1.21
MBD1-216ENST00000587605 DDX41Q9UJV9 622 aaKnown RBP22.61■■□□□ 1.21
MBD1-216ENST00000587605 DYNLL1P63167 89 aaKnown RBP22.6■■□□□ 1.21
MBD1-216ENST00000587605 CTCFLQ8NI51 663 aaPredicted RBP22.6■■□□□ 1.21
MBD1-216ENST00000587605 GTPBP4Q9BZE4 634 aaKnown RBP22.6■■□□□ 1.21
MBD1-216ENST00000587605 V9GY48 417 aaPredicted RBP22.6■■□□□ 1.21
MBD1-216ENST00000587605 TMEM232C9JQI7 657 aa22.59■■□□□ 1.21
MBD1-216ENST00000587605 FMR1Q06787 632 aaKnown RBP eCLIP22.59■■□□□ 1.21
MBD1-216ENST00000587605 SBK1Q52WX2 424 aa22.59■■□□□ 1.21
MBD1-216ENST00000587605 TNFRSF25Q93038 417 aa22.59■■□□□ 1.21
MBD1-216ENST00000587605 NSUN4Q96CB9 384 aaKnown RBP22.59■■□□□ 1.21
MBD1-216ENST00000587605 GSDMAQ96QA5 445 aa22.59■■□□□ 1.21
MBD1-216ENST00000587605 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
MBD1-216ENST00000587605 ARPP21Q9UBL0 812 aaPredicted RBP22.59■■□□□ 1.21
MBD1-216ENST00000587605 ATP2B1P20020 1258 aa22.59■■□□□ 1.21
MBD1-216ENST00000587605 TMEM139Q8IV31 216 aa22.59■■□□□ 1.21
MBD1-216ENST00000587605 BAG1Q99933 345 aaPredicted RBP22.59■■□□□ 1.21
MBD1-216ENST00000587605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.59■■□□□ 1.212e-7■■■■□ 20.3
MBD1-216ENST00000587605 CNTNAP5Q8WYK1 1306 aa22.58■■□□□ 1.21
MBD1-216ENST00000587605 NAA30Q147X3 362 aaPredicted RBP22.58■■□□□ 1.21
MBD1-216ENST00000587605 SPATA1Q5VX52 437 aa22.58■■□□□ 1.21
MBD1-216ENST00000587605 REXO1L1PQ8IX06 675 aa22.58■■□□□ 1.21
MBD1-216ENST00000587605 SHISA4Q96DD7 197 aa22.58■■□□□ 1.21
MBD1-216ENST00000587605 KIAA1551Q9HCM1 1747 aa22.58■■□□□ 1.2
MBD1-216ENST00000587605 PLEKHA8P1O95397 391 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 GTF2E1P29083 439 aaPredicted RBP22.57■■□□□ 1.2
MBD1-216ENST00000587605 TTC38Q5R3I4 469 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 C3orf67Q6ZVT6 689 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 PDILTQ8N807 584 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 DHX58Q96C10 678 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 CTAGE1Q96RT6 745 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 COL24A1Q17RW2 1714 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 A0A1B0GTH6 734 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 USP17L12C9JPN9 530 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 USP17L21D6R901 530 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 ATP2C1P98194 919 aaPredicted RBP22.57■■□□□ 1.2
MBD1-216ENST00000587605 DMTNQ08495 405 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 PAGE5Q96GU1 130 aa22.57■■□□□ 1.2
MBD1-216ENST00000587605 CCDC88AQ3V6T2 1871 aa22.56■■□□□ 1.2
MBD1-216ENST00000587605 ADAMTS2O95450 1211 aa22.56■■□□□ 1.2
MBD1-216ENST00000587605 KIF5BP33176 963 aa22.56■■□□□ 1.2
MBD1-216ENST00000587605 RPS8P62241 208 aaKnown RBP22.56■■□□□ 1.2
MBD1-216ENST00000587605 NR1I3Q14994 352 aa22.56■■□□□ 1.2
MBD1-216ENST00000587605 TRIM65Q6PJ69 517 aa22.56■■□□□ 1.2
MBD1-216ENST00000587605 ZNF384Q8TF68 577 aa22.56■■□□□ 1.2
MBD1-216ENST00000587605 SYMPKQ92797 1274 aaKnown RBP22.56■■□□□ 1.2
MBD1-216ENST00000587605 PPP2R2CQ9Y2T4 447 aa22.56■■□□□ 1.2
MBD1-216ENST00000587605 HIBADHP31937 336 aaKnown RBP22.55■■□□□ 1.2
MBD1-216ENST00000587605 MECOMQ03112 1051 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 ELF2Q15723 593 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 SPTY2D1Q68D10 685 aaPredicted RBP22.55■■□□□ 1.2
MBD1-216ENST00000587605 USP49Q70CQ1 688 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 GRAMD1CQ8IYS0 662 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 LINC00116Q8NCU8 138 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 DCP1AQ9NPI6 582 aaPredicted RBP22.55■■□□□ 1.2
MBD1-216ENST00000587605 DNAI1Q9UI46 699 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 CYP2D7A0A087X1C5 515 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 SPDYE4A6NLX3 237 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 SCG2P13521 617 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 ZSCAN20P17040 1043 aaPredicted RBP22.55■■□□□ 1.2
MBD1-216ENST00000587605 CALML3P27482 149 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 DPYDQ12882 1025 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 CCDC178Q5BJE1 867 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 RC3H1Q5TC82 1133 aaKnown RBP22.55■■□□□ 1.2
MBD1-216ENST00000587605 TC2NQ8N9U0 490 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 CELF1Q92879 486 aaKnown RBP22.55■■□□□ 1.2
MBD1-216ENST00000587605 NLRP3Q96P20 1036 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 PANX2Q96RD6 677 aa22.55■■□□□ 1.2
MBD1-216ENST00000587605 NAA15Q9BXJ9 866 aaKnown RBP22.55■■□□□ 1.2
MBD1-216ENST00000587605 SYNRGQ9UMZ2 1314 aa22.54■■□□□ 1.2
MBD1-216ENST00000587605 TPM1P09493 284 aa22.54■■□□□ 1.2
MBD1-216ENST00000587605 NPY5RQ15761 445 aa22.54■■□□□ 1.2
MBD1-216ENST00000587605 ZNF827Q17R98 1081 aa22.54■■□□□ 1.2
MBD1-216ENST00000587605 KMT5BQ4FZB7 885 aa22.54■■□□□ 1.2
MBD1-216ENST00000587605 TAF1P21675 1872 aa22.53■■□□□ 1.2
MBD1-216ENST00000587605 FAM205CA6NFA0 338 aa22.53■■□□□ 1.2
MBD1-216ENST00000587605 PRDM1O75626 825 aa22.53■■□□□ 1.2
MBD1-216ENST00000587605 CUL4BQ13620 913 aa22.53■■□□□ 1.2
MBD1-216ENST00000587605 PFKFB3Q16875 520 aaPredicted RBP22.53■■□□□ 1.2
MBD1-216ENST00000587605 TRMT44Q8IYL2 757 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms